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The map label for this gene is mcp4 [H]

Identifier: 192289696

GI number: 192289696

Start: 1356868

End: 1358619

Strand: Reverse

Name: mcp4 [H]

Synonym: Rpal_1286

Alternate gene names: 192289696

Gene position: 1358619-1356868 (Counterclockwise)

Preceding gene: 192289698

Following gene: 192289688

Centisome position: 23.65

GC content: 67.47

Gene sequence:

>1752_bases
ATGGCGTTCGGCCTATTTCGCAAGCGGTCGCCGGAAACGGCGACCCTGAACGTCGTGGCTGCCTCGCCCCCGGCTGCAGC
CGAACCGACGGTCGCGGAGGCCGATTCCGCCCGTGAAATCCTCGAATTGCTTGAGCTGGAGCTCGGCTCGCTGATTCGGC
AGCTCGAACGTGCTGCCCATTCCGTGACCACCGGGGTGCAGTCGACCACCTCGACGCTTCACACCATCCGCGAGCGCACC
GACGCCCTCACCGGCCGGACCAGTGCCGCCCAGACGACCGCGAGTTCGTTCTCCCAGGCGGCCGACAAATTCACCCATTC
GGCCCATGGCATCGGCGCACAGGTCCGTCAGGCATCGCAACTCGCCGACGACGCCAGCGCCGCCGCCGACGAGGCCACGG
CCAATGTCGAGCGGCTGCGCGATTCGTCGGCTGCGATCGGCAATGTGGTCAATCTGATCTCCCAGATCGCCCGGCAGACC
ACCCTGCTGGCGCTGAACTCCACGATCGAGGCGGCCCGCGCCGGCGCCGCCGGCCGCGGCTTCGCCGTGGTGGCGACCGA
GGTCAAGGCGCTGGCGGTGCAGACCCAGGAGGCGACCGAGGAGATCAAGCGCAAGATCGACGCCCTTCAGCGCGACGCGT
CCAGCTCGGCCGACGCCGTCCATCGCATCACCAGCGCGATCTCGGCGATCCGGCCGGTATTCGAGACAGTCAACGGCGCG
GTAGCCGAACAGAACGCCACCACCGGCGAAATCGCCGGCAACGCCACCTCGGCGTCGACCTTCATCGCCTCGGTCGGCGA
CAGCGCCGCCGAGATCGACAGCGCCACCCGCGAGGCAGAACAACACGGCGACGAGGTCGCCCGCGCCGGCCAAAACGTGA
CCAACTTCGCCGAGAAGCTGCGGGCCAGGACCGCGGTTCTACTCAAGCTCGGCGACCGCGAAGACGCACGACGCCGCGAG
AAGCTGCCGTGCCACCTGCAGATCGAGCTCGACACTTCGCGCGGCAGGATCACCGCGCCCGTGTACGAAATCTCGATGGA
CGGCGTGTTGATCAGCGGCCCATCCGCCGCCGCCCTGACGACCGGCCAGCAACTCTCCGCTGAGCTGCAGGACATCGGCG
CCTGCCGCATCCGCATCGCCGAGCACGGCAAGGCCGGGGCGCTGGCGCTATTCGTCGCCCCTGACGCGGCGCTGCAGAGC
CGGATCGAGGATCGGCTGTGGGCGATCCGCGACGAGAACACCGAGTTCGTCACCCGCGCGATCGAGGCCGGGCATGAACT
TTCGAAGATCTTCGAACGCGGCATTGCCTCAGGCGCGCTGACGCTGGAGCAGATGTTCGACGAAAACTACATCGAGATCG
CCGGAACCGACCCGAAGCAATACCGCACGCAGTATCTCGACTGGGCCGACCGCGCGCTGCCACCGTTCCAAGAAAGCTTT
CTGGCCAAGGACCGGCGGATGGCGTTCTGCGTGATGATCGACCGCAACGGTTATCTGCCGGTGCACAACAAGCTGTACTC
GCAGCCGCAGCGGCCGGGCGACGTCGCTTTCAACACCGCCAACTCACGCAACCGCCGGATCTTCAACGATCCGGCCGGGC
TCGCGGCAGGGCGCAATACCCGCTCGTTCCTGATCCAGAGCTACGCCCGCGATATGGGCGGCGGCCAGACCGTGATGATG
CGCGAGATCGATGTGCCGGTGCGGGTGCGCGGTCGCCACTGGGGCGGCTTCCGCACCGCCTACAAGCTGTAA

Upstream 100 bases:

>100_bases
GAAGCACGAAATCCGTAATTCCACGGAAAGAAAATTTAACCGTAACTTCACGGGGCGTCGCGAGAGTAGCAGCCCATCTT
CTAGTTTTGCGGGAGGAACC

Downstream 100 bases:

>100_bases
GCAAAGGGCGGCGCTAACCGGCGAGGCGGTAGCGGCCGCTGATCACCGGGTCGCCCTCGGTGGCGACGACGCCGCGCATC
ACCAGATCTTCCAGATGCGC

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 583; Mature: 582

Protein sequence:

>583_residues
MAFGLFRKRSPETATLNVVAASPPAAAEPTVAEADSAREILELLELELGSLIRQLERAAHSVTTGVQSTTSTLHTIRERT
DALTGRTSAAQTTASSFSQAADKFTHSAHGIGAQVRQASQLADDASAAADEATANVERLRDSSAAIGNVVNLISQIARQT
TLLALNSTIEAARAGAAGRGFAVVATEVKALAVQTQEATEEIKRKIDALQRDASSSADAVHRITSAISAIRPVFETVNGA
VAEQNATTGEIAGNATSASTFIASVGDSAAEIDSATREAEQHGDEVARAGQNVTNFAEKLRARTAVLLKLGDREDARRRE
KLPCHLQIELDTSRGRITAPVYEISMDGVLISGPSAAALTTGQQLSAELQDIGACRIRIAEHGKAGALALFVAPDAALQS
RIEDRLWAIRDENTEFVTRAIEAGHELSKIFERGIASGALTLEQMFDENYIEIAGTDPKQYRTQYLDWADRALPPFQESF
LAKDRRMAFCVMIDRNGYLPVHNKLYSQPQRPGDVAFNTANSRNRRIFNDPAGLAAGRNTRSFLIQSYARDMGGGQTVMM
REIDVPVRVRGRHWGGFRTAYKL

Sequences:

>Translated_583_residues
MAFGLFRKRSPETATLNVVAASPPAAAEPTVAEADSAREILELLELELGSLIRQLERAAHSVTTGVQSTTSTLHTIRERT
DALTGRTSAAQTTASSFSQAADKFTHSAHGIGAQVRQASQLADDASAAADEATANVERLRDSSAAIGNVVNLISQIARQT
TLLALNSTIEAARAGAAGRGFAVVATEVKALAVQTQEATEEIKRKIDALQRDASSSADAVHRITSAISAIRPVFETVNGA
VAEQNATTGEIAGNATSASTFIASVGDSAAEIDSATREAEQHGDEVARAGQNVTNFAEKLRARTAVLLKLGDREDARRRE
KLPCHLQIELDTSRGRITAPVYEISMDGVLISGPSAAALTTGQQLSAELQDIGACRIRIAEHGKAGALALFVAPDAALQS
RIEDRLWAIRDENTEFVTRAIEAGHELSKIFERGIASGALTLEQMFDENYIEIAGTDPKQYRTQYLDWADRALPPFQESF
LAKDRRMAFCVMIDRNGYLPVHNKLYSQPQRPGDVAFNTANSRNRRIFNDPAGLAAGRNTRSFLIQSYARDMGGGQTVMM
REIDVPVRVRGRHWGGFRTAYKL
>Mature_582_residues
AFGLFRKRSPETATLNVVAASPPAAAEPTVAEADSAREILELLELELGSLIRQLERAAHSVTTGVQSTTSTLHTIRERTD
ALTGRTSAAQTTASSFSQAADKFTHSAHGIGAQVRQASQLADDASAAADEATANVERLRDSSAAIGNVVNLISQIARQTT
LLALNSTIEAARAGAAGRGFAVVATEVKALAVQTQEATEEIKRKIDALQRDASSSADAVHRITSAISAIRPVFETVNGAV
AEQNATTGEIAGNATSASTFIASVGDSAAEIDSATREAEQHGDEVARAGQNVTNFAEKLRARTAVLLKLGDREDARRREK
LPCHLQIELDTSRGRITAPVYEISMDGVLISGPSAAALTTGQQLSAELQDIGACRIRIAEHGKAGALALFVAPDAALQSR
IEDRLWAIRDENTEFVTRAIEAGHELSKIFERGIASGALTLEQMFDENYIEIAGTDPKQYRTQYLDWADRALPPFQESFL
AKDRRMAFCVMIDRNGYLPVHNKLYSQPQRPGDVAFNTANSRNRRIFNDPAGLAAGRNTRSFLIQSYARDMGGGQTVMMR
EIDVPVRVRGRHWGGFRTAYKL

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=263, Percent_Identity=34.2205323193916, Blast_Score=93, Evalue=5e-20,
Organism=Escherichia coli, GI1788194, Length=220, Percent_Identity=33.1818181818182, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI2367378, Length=256, Percent_Identity=32.03125, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI1789453, Length=270, Percent_Identity=29.6296296296296, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1787690, Length=253, Percent_Identity=31.2252964426877, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 62782; Mature: 62651

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFGLFRKRSPETATLNVVAASPPAAAEPTVAEADSAREILELLELELGSLIRQLERAAH
CCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SVTTGVQSTTSTLHTIRERTDALTGRTSAAQTTASSFSQAADKFTHSAHGIGAQVRQASQ
HHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LADDASAAADEATANVERLRDSSAAIGNVVNLISQIARQTTLLALNSTIEAARAGAAGRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
FAVVATEVKALAVQTQEATEEIKRKIDALQRDASSSADAVHRITSAISAIRPVFETVNGA
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCH
VAEQNATTGEIAGNATSASTFIASVGDSAAEIDSATREAEQHGDEVARAGQNVTNFAEKL
HHCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
RARTAVLLKLGDREDARRREKLPCHLQIELDTSRGRITAPVYEISMDGVLISGPSAAALT
HHHHHHEEEECCCHHHHHHHCCCEEEEEEEECCCCEEECCEEEEEECCEEEECCCCHHCC
TGQQLSAELQDIGACRIRIAEHGKAGALALFVAPDAALQSRIEDRLWAIRDENTEFVTRA
CCHHHHHHHHHCCCEEEEEECCCCCCEEEEEECCCHHHHHHHHHHHEEECCCCHHHHHHH
IEAGHELSKIFERGIASGALTLEQMFDENYIEIAGTDPKQYRTQYLDWADRALPPFQESF
HHCCHHHHHHHHHHCCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCCCHHHHH
LAKDRRMAFCVMIDRNGYLPVHNKLYSQPQRPGDVAFNTANSRNRRIFNDPAGLAAGRNT
HHCCCCEEEEEEEECCCCCCCCHHHHCCCCCCCCCEEECCCCCCCEEECCCCCCCCCCCH
RSFLIQSYARDMGGGQTVMMREIDVPVRVRGRHWGGFRTAYKL
HHHHHHHHHHHCCCCCEEEEEECCCCEEECCCCCCCCHHHCCC
>Mature Secondary Structure 
AFGLFRKRSPETATLNVVAASPPAAAEPTVAEADSAREILELLELELGSLIRQLERAAH
CCCCCCCCCCCCEEEEEEECCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SVTTGVQSTTSTLHTIRERTDALTGRTSAAQTTASSFSQAADKFTHSAHGIGAQVRQASQ
HHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LADDASAAADEATANVERLRDSSAAIGNVVNLISQIARQTTLLALNSTIEAARAGAAGRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
FAVVATEVKALAVQTQEATEEIKRKIDALQRDASSSADAVHRITSAISAIRPVFETVNGA
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCH
VAEQNATTGEIAGNATSASTFIASVGDSAAEIDSATREAEQHGDEVARAGQNVTNFAEKL
HHCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
RARTAVLLKLGDREDARRREKLPCHLQIELDTSRGRITAPVYEISMDGVLISGPSAAALT
HHHHHHEEEECCCHHHHHHHCCCEEEEEEEECCCCEEECCEEEEEECCEEEECCCCHHCC
TGQQLSAELQDIGACRIRIAEHGKAGALALFVAPDAALQSRIEDRLWAIRDENTEFVTRA
CCHHHHHHHHHCCCEEEEEECCCCCCEEEEEECCCHHHHHHHHHHHEEECCCCHHHHHHH
IEAGHELSKIFERGIASGALTLEQMFDENYIEIAGTDPKQYRTQYLDWADRALPPFQESF
HHCCHHHHHHHHHHCCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCCCHHHHH
LAKDRRMAFCVMIDRNGYLPVHNKLYSQPQRPGDVAFNTANSRNRRIFNDPAGLAAGRNT
HHCCCCEEEEEEEECCCCCCCCHHHHCCCCCCCCCEEECCCCCCCEEECCCCCCCCCCCH
RSFLIQSYARDMGGGQTVMMREIDVPVRVRGRHWGGFRTAYKL
HHHHHHHHHHHCCCCCEEEEEECCCCEEECCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]