| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192289522
Identifier: 192289522
GI number: 192289522
Start: 1170221
End: 1171399
Strand: Reverse
Name: 192289522
Synonym: Rpal_1104
Alternate gene names: NA
Gene position: 1171399-1170221 (Counterclockwise)
Preceding gene: 192289523
Following gene: 192289521
Centisome position: 20.39
GC content: 57.59
Gene sequence:
>1179_bases GTGGCAACGGGCAAAGACTCAGACGTGAAGTACAACTCTCCCATGTCCACGTCGTCAAGTGAGCGCGATCTTCGGATTGA TCTCTTTTGCGGGCTTTCGTTGTGGTGGATCTTGGTTGATCACGTTCCCGAAAGCTATCTCAATCATTTCACACCCGAGA ACTTCGGGTCAGCGACGCCGCAGAGATACTTACTCTCGGGACTCGCATCCGGCGTGGTCTATGACGGCGTTGCACGATAC TCGGGCCTGGCCCTCGCTTGCATGCGTGTATTCCGGCGAGCCGCTCAGATCTATATCGCTCAAATCGTCACGTTGGCCTT CTTGTTGGCCGAAGTGTCTTACTTTGGTGCCCGGCAGGCCAGTATGCTGGATCATGCCAACTTGGACGTCTTGCTTGATA GGTCGGCAGAGACCACGTTCCAGGCAATCTTGCTGCGGTATTCGCCCGTGAATCGCGACCCATTACTGCTGATGATCGTT CTCCACTTTGGGCTGCTGCTGATCCTTCCCTTGGTGATGCATGCCTGGCAGCTGGCGCTGCATGGGTCAGCGGCACTTTA CGTCTGCGCTCACCTGTTCGATTGGTACCTTTCTGCCTATCCAACCGGCCAGCTCTATTTCAATCCGCTGAACTGGCAGT TGCTCTTCGTAATCGGCGTCTGGTGGGGAGCAAGCCGGGGCACGTGGCAGCTTGTCGTTCTCAGGTCAAACGCTCTCGCA GCTCTGGCGACGCTCCACTTGGCATTCTCACTCGTGACTACCTTGGGGTGGCCAATTCATTCGATCGAGGCCTACGTGCC GGCATGGCTCTCCCGCCTCAACTATCCGGTGGATAAGAGCAACCTCGATGTGCTGCGCTTACTGCACTTTGCTTCCCTCG CGCTGCTCTGTTGGCGCTTTCTTCCGAGCAGTTCCGCCATCGTGAGAACGCGGGAGATACGACCCTCTGGTGCGATGCGG CAAACATTCGCTCGTAATCTATTGCGCCGGCGTCCGGCTTTCCTTTGCTGCGCACGCCGTTCTGAACCTGGGTTGGAACA GCCTTGGGGCGCAGACTTTGGTCAGTTTGGCAGGGCTCGGCGCGATGAGCGCTATCGCGTCGTTGCTTGCCGCAACCGAA CGAGCTGCGGCTGGTCATCCGCGTCCGCTATGAGCGCACAAGAGAGGCAATTCGCGTGA
Upstream 100 bases:
>100_bases TAAAGAGTTCGGGCAACCGTACTCGTTCAACACTTTGCCTGGCTGGTGTCTCGGCATGGAGATCGCCTACGTTTACTGAT GCAGCGTCAAGGACTCGCTG
Downstream 100 bases:
>100_bases CGTACTTTTTTGCTCTCCGGGGGTGCCGAAGCAAGCCAATCAATCGCGAACCGTCAGGGACTGTGCAGCGATCGAAACGA GGGCTTGTTGCGCGTCGACG
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein OpgC; Transmembrane Protein; Acyltransferase Family Protein
Number of amino acids: Translated: 392; Mature: 391
Protein sequence:
>392_residues MATGKDSDVKYNSPMSTSSSERDLRIDLFCGLSLWWILVDHVPESYLNHFTPENFGSATPQRYLLSGLASGVVYDGVARY SGLALACMRVFRRAAQIYIAQIVTLAFLLAEVSYFGARQASMLDHANLDVLLDRSAETTFQAILLRYSPVNRDPLLLMIV LHFGLLLILPLVMHAWQLALHGSAALYVCAHLFDWYLSAYPTGQLYFNPLNWQLLFVIGVWWGASRGTWQLVVLRSNALA ALATLHLAFSLVTTLGWPIHSIEAYVPAWLSRLNYPVDKSNLDVLRLLHFASLALLCWRFLPSSSAIVRTREIRPSGAMR QTFARNLLRRRPAFLCCARRSEPGLEQPWGADFGQFGRARRDERYRVVACRNRTSCGWSSASAMSAQERQFA
Sequences:
>Translated_392_residues MATGKDSDVKYNSPMSTSSSERDLRIDLFCGLSLWWILVDHVPESYLNHFTPENFGSATPQRYLLSGLASGVVYDGVARY SGLALACMRVFRRAAQIYIAQIVTLAFLLAEVSYFGARQASMLDHANLDVLLDRSAETTFQAILLRYSPVNRDPLLLMIV LHFGLLLILPLVMHAWQLALHGSAALYVCAHLFDWYLSAYPTGQLYFNPLNWQLLFVIGVWWGASRGTWQLVVLRSNALA ALATLHLAFSLVTTLGWPIHSIEAYVPAWLSRLNYPVDKSNLDVLRLLHFASLALLCWRFLPSSSAIVRTREIRPSGAMR QTFARNLLRRRPAFLCCARRSEPGLEQPWGADFGQFGRARRDERYRVVACRNRTSCGWSSASAMSAQERQFA >Mature_391_residues ATGKDSDVKYNSPMSTSSSERDLRIDLFCGLSLWWILVDHVPESYLNHFTPENFGSATPQRYLLSGLASGVVYDGVARYS GLALACMRVFRRAAQIYIAQIVTLAFLLAEVSYFGARQASMLDHANLDVLLDRSAETTFQAILLRYSPVNRDPLLLMIVL HFGLLLILPLVMHAWQLALHGSAALYVCAHLFDWYLSAYPTGQLYFNPLNWQLLFVIGVWWGASRGTWQLVVLRSNALAA LATLHLAFSLVTTLGWPIHSIEAYVPAWLSRLNYPVDKSNLDVLRLLHFASLALLCWRFLPSSSAIVRTREIRPSGAMRQ TFARNLLRRRPAFLCCARRSEPGLEQPWGADFGQFGRARRDERYRVVACRNRTSCGWSSASAMSAQERQFA
Specific function: Unknown
COG id: COG4645
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44214; Mature: 44082
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATGKDSDVKYNSPMSTSSSERDLRIDLFCGLSLWWILVDHVPESYLNHFTPENFGSATP CCCCCCCCEEECCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCH QRYLLSGLASGVVYDGVARYSGLALACMRVFRRAAQIYIAQIVTLAFLLAEVSYFGARQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH SMLDHANLDVLLDRSAETTFQAILLRYSPVNRDPLLLMIVLHFGLLLILPLVMHAWQLAL HHHHCCCCEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH HGSAALYVCAHLFDWYLSAYPTGQLYFNPLNWQLLFVIGVWWGASRGTWQLVVLRSNALA CCCHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEEEEHHHCCCCCCEEEEEEECCHHH ALATLHLAFSLVTTLGWPIHSIEAYVPAWLSRLNYPVDKSNLDVLRLLHFASLALLCWRF HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH LPSSSAIVRTREIRPSGAMRQTFARNLLRRRPAFLCCARRSEPGLEQPWGADFGQFGRAR CCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCHHEEEECCCCCCCCCCCCCCHHHHCCCC RDERYRVVACRNRTSCGWSSASAMSAQERQFA CCCCEEEEEECCCCCCCCCCHHHHCHHHHCCC >Mature Secondary Structure ATGKDSDVKYNSPMSTSSSERDLRIDLFCGLSLWWILVDHVPESYLNHFTPENFGSATP CCCCCCCEEECCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCH QRYLLSGLASGVVYDGVARYSGLALACMRVFRRAAQIYIAQIVTLAFLLAEVSYFGARQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH SMLDHANLDVLLDRSAETTFQAILLRYSPVNRDPLLLMIVLHFGLLLILPLVMHAWQLAL HHHHCCCCEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH HGSAALYVCAHLFDWYLSAYPTGQLYFNPLNWQLLFVIGVWWGASRGTWQLVVLRSNALA CCCHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEEEEHHHCCCCCCEEEEEEECCHHH ALATLHLAFSLVTTLGWPIHSIEAYVPAWLSRLNYPVDKSNLDVLRLLHFASLALLCWRF HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH LPSSSAIVRTREIRPSGAMRQTFARNLLRRRPAFLCCARRSEPGLEQPWGADFGQFGRAR CCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCHHEEEECCCCCCCCCCCCCCHHHHCCCC RDERYRVVACRNRTSCGWSSASAMSAQERQFA CCCCEEEEEECCCCCCCCCCHHHHCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA