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The map label for this gene is 192289521

Identifier: 192289521

GI number: 192289521

Start: 1169446

End: 1169991

Strand: Reverse

Name: 192289521

Synonym: Rpal_1103

Alternate gene names: NA

Gene position: 1169991-1169446 (Counterclockwise)

Preceding gene: 192289522

Following gene: 192289520

Centisome position: 20.37

GC content: 60.26

Gene sequence:

>546_bases
ATGAAGTTCGCAATGGGATTCGCCACCGCCACGCTGCTCGGCATTCTCGGCATGTTGGGCGTCATTTACACCGGCCGGTA
CGACGTCGCAGCAGGGAGCGGCATGCATCCTCTGTTCGCCTGGGCCCTGCATACGACAATGGAGAACTCCGTTCGCGCGA
GAGCCGCCGCGATCGCCTCGCCACCGGATCTGCCTGCTCTGGCTACTCAGGGCTTTCAAGATTTCGACGAAATGTGCGCA
CAATGCCACGGGGCGCCCGGGAAGGAAGCAGGCGAGATCGGAAACGGTCTTTCTCCTAAACCTCCCCCGCTCAAGGACGC
CGCGAAACGATGGAGCGCCCCAGAGATCTTTTGGATTGTGAAGAACGGCGTCCATATGACCGGCATGCCCGCATTCGGTC
CGACGCATGACGACGAGCGAATTTGGGCGGTCGTGGCGTTTGTGAGGAGCCTCCCTACTTTGACCGCAGAACAATACGAA
GCACTTCAATCGGATACCACAGACGTCGCCAAACCCCACAGCCACGGGGGGCACGAGCATCAGTAG

Upstream 100 bases:

>100_bases
GCTCAATCCACGCTATGCATCGCCGGTTAACAGGTCCACTTGACCCCGCTCGCGGAACTCGCGTTGTAGCCCCAACAGTG
CCCGCACCGCGGAGACTATC

Downstream 100 bases:

>100_bases
GATCTGCAAACCGTTCCGATGGCGGTCGGACGCCGATTATCGACGAGCCGATTTCCGAAGCAACGCCATCCTGCGACGGA
TCTCAACGCCATCGCTACGT

Product: cytochrome C class I protein

Products: NA

Alternate protein names: Cytochrome C Class I; Cytochrome C Class I Protein; Cytochrome C; Class I Triheme Cytochrome C; Di-Heme Cytochrome C; Cytochrome C-; Cytochrome C Monohaem

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MKFAMGFATATLLGILGMLGVIYTGRYDVAAGSGMHPLFAWALHTTMENSVRARAAAIASPPDLPALATQGFQDFDEMCA
QCHGAPGKEAGEIGNGLSPKPPPLKDAAKRWSAPEIFWIVKNGVHMTGMPAFGPTHDDERIWAVVAFVRSLPTLTAEQYE
ALQSDTTDVAKPHSHGGHEHQ

Sequences:

>Translated_181_residues
MKFAMGFATATLLGILGMLGVIYTGRYDVAAGSGMHPLFAWALHTTMENSVRARAAAIASPPDLPALATQGFQDFDEMCA
QCHGAPGKEAGEIGNGLSPKPPPLKDAAKRWSAPEIFWIVKNGVHMTGMPAFGPTHDDERIWAVVAFVRSLPTLTAEQYE
ALQSDTTDVAKPHSHGGHEHQ
>Mature_181_residues
MKFAMGFATATLLGILGMLGVIYTGRYDVAAGSGMHPLFAWALHTTMENSVRARAAAIASPPDLPALATQGFQDFDEMCA
QCHGAPGKEAGEIGNGLSPKPPPLKDAAKRWSAPEIFWIVKNGVHMTGMPAFGPTHDDERIWAVVAFVRSLPTLTAEQYE
ALQSDTTDVAKPHSHGGHEHQ

Specific function: Unknown

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19363; Mature: 19363

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFAMGFATATLLGILGMLGVIYTGRYDVAAGSGMHPLFAWALHTTMENSVRARAAAIAS
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PPDLPALATQGFQDFDEMCAQCHGAPGKEAGEIGNGLSPKPPPLKDAAKRWSAPEIFWIV
CCCCCHHHHCCHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCHHHHHHHCCCCEEEEEE
KNGVHMTGMPAFGPTHDDERIWAVVAFVRSLPTLTAEQYEALQSDTTDVAKPHSHGGHEH
ECCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHCCCCCCCCCCC
Q
C
>Mature Secondary Structure
MKFAMGFATATLLGILGMLGVIYTGRYDVAAGSGMHPLFAWALHTTMENSVRARAAAIAS
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PPDLPALATQGFQDFDEMCAQCHGAPGKEAGEIGNGLSPKPPPLKDAAKRWSAPEIFWIV
CCCCCHHHHCCHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCHHHHHHHCCCCEEEEEE
KNGVHMTGMPAFGPTHDDERIWAVVAFVRSLPTLTAEQYEALQSDTTDVAKPHSHGGHEH
ECCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHCCCCCCCCCCC
Q
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA