| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192289523
Identifier: 192289523
GI number: 192289523
Start: 1171598
End: 1171765
Strand: Reverse
Name: 192289523
Synonym: Rpal_1105
Alternate gene names: NA
Gene position: 1171765-1171598 (Counterclockwise)
Preceding gene: 192289524
Following gene: 192289522
Centisome position: 20.4
GC content: 54.76
Gene sequence:
>168_bases ATGCAGGCGCAGAACGTCGCCTGCGAGATTCCACAGCTTCCAAATCGCCGGGCGTTCAAAGATATGCGGTACGTTCGCGT CTATAAATACGCATCCCGCGGCAGTTTCGATAAGGCAAGCGCCAACGACCAACGGAAACTAAATCTCCAAAGCACCAGCG CGACGTAG
Upstream 100 bases:
>100_bases CGCTTTCCTGCTATCCTCGATCAATCCAATCTTGCCCGCCCATGTGCACATCATCAACAGCGGGTACGGACCGAAGAATA GCCTCCATCGGAGGCTTAAC
Downstream 100 bases:
>100_bases GAGAACCATTATGGCGCCGCGCCGCGGACTCTGCCTGTCCACGACGCAAGCACTGGCATGCTCAAACGGCTGTAATATCT CGCGAAGCTCAGCGTCCATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 55; Mature: 55
Protein sequence:
>55_residues MQAQNVACEIPQLPNRRAFKDMRYVRVYKYASRGSFDKASANDQRKLNLQSTSAT
Sequences:
>Translated_55_residues MQAQNVACEIPQLPNRRAFKDMRYVRVYKYASRGSFDKASANDQRKLNLQSTSAT >Mature_55_residues MQAQNVACEIPQLPNRRAFKDMRYVRVYKYASRGSFDKASANDQRKLNLQSTSAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6325; Mature: 6325
Theoretical pI: Translated: 10.63; Mature: 10.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAQNVACEIPQLPNRRAFKDMRYVRVYKYASRGSFDKASANDQRKLNLQSTSAT CCCCCCEEECCCCCCCCCHHHHHHHHEEECCCCCCCCCCCCCCCEEEECCCCCCC >Mature Secondary Structure MQAQNVACEIPQLPNRRAFKDMRYVRVYKYASRGSFDKASANDQRKLNLQSTSAT CCCCCCEEECCCCCCCCCHHHHHHHHEEECCCCCCCCCCCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA