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The map label for this gene is 192289287

Identifier: 192289287

GI number: 192289287

Start: 911266

End: 911997

Strand: Reverse

Name: 192289287

Synonym: Rpal_0859

Alternate gene names: NA

Gene position: 911997-911266 (Counterclockwise)

Preceding gene: 192289288

Following gene: 192289286

Centisome position: 15.88

GC content: 65.98

Gene sequence:

>732_bases
ATGCTCAAGCTGAACACATGGCTGCTGCCGCTTTTGCTCCTGCTGCTGCCGATGACGGCCCAGGCCGCCGACATCAGCGG
CGTGCCGAAGATCCGCGACGGCGACCATGCGCTGATCGGGAAGACCCGCATCCGGCTCGCCGGCATCGACGCTCCGGGGG
TGGATCAGCTTTGTCTCAACCCTAAGGGTGATCGCTGGACCTGTGGCGTCGCCGCCCGTGACGCGCTGGCTCAGCATACC
GCCGGCAAGAGCTGGACCTGCCACGTCCTGCGCGTCGACAAGGCCGGCCGCTCGATCGCCAAATGCGAGGTCGACGGCGA
AGACCTCGGACGATGGATGGTGAAGAACGGCTGGGCGCTGGCCTATGTGCAGTACTCCCACGCCTATGAGGCCGAGGAGA
AGGCCGCCCGCGAGGCCAAGATCGGACTGTGGCAGGGTTCGTTCATCGCACCGTGGGACTGGCGAGTGCGCAGTGCAAAG
ACTCAAATTCTTGGCGCCACCAAACCGCCGAAGGATGCCCGGCGGATTCTACTGGCGTCGGCCTCCGGCCCGGTCGCGCC
GTCGCCGGATTGCACCATCAAGGGCAACGTCAACAAATCCGGCGAGTGCATCTACCACAAGCCGACCAGCCGCTGGTACG
CGCAGATCCGCATGAAGATCAGCAAGGGCACCCGCTGGTTCTGCTCGGTCGAGGAAGCCGAGGCCGCCGGCTGCCGCGAG
ACGCGGCGCTAG

Upstream 100 bases:

>100_bases
TTGAAGCAAGGTGCTGCCGAGGCTCTGGCCCGGCCGCCCAAGATTCAGCACAATCGGCGAACCTGTTTGCGGCACGGGTG
CCTGCCGGGAAGGTCGACGC

Downstream 100 bases:

>100_bases
CCGTCGCAACAGGCGGGGCTGCAGGGGCGGACCGTGAACCACACAGCACATGATCCTTCGCGGCCGCAGCGGCCGCGCAA
ACGCCGGCTGCGGCGGGCGT

Product: nuclease

Products: NA

Alternate protein names: Succinoglycan Biosynthesis Protein; Nuclease-Like Protein; Succinoglycan Biosynthesis Protein ExoI; Nuclease Domain Protein; SNase-Like Nuclease; Excalibur Domain Protein; Signal Peptide; Rare Lipoprotein A; Nuclease Family Protein; Exopolysaccharide Biosynthesis Protein; Micrococcal Nuclease; Excalibur; Excalibur Domain-Containing Protein; Succinoglycan Biotynthesis Protein ExoI; Nuclease-Related Protein; Nuclease Protein; Periplasmic Protein; Succinoglycan Biosynthesis Protein EXOI

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MLKLNTWLLPLLLLLLPMTAQAADISGVPKIRDGDHALIGKTRIRLAGIDAPGVDQLCLNPKGDRWTCGVAARDALAQHT
AGKSWTCHVLRVDKAGRSIAKCEVDGEDLGRWMVKNGWALAYVQYSHAYEAEEKAAREAKIGLWQGSFIAPWDWRVRSAK
TQILGATKPPKDARRILLASASGPVAPSPDCTIKGNVNKSGECIYHKPTSRWYAQIRMKISKGTRWFCSVEEAEAAGCRE
TRR

Sequences:

>Translated_243_residues
MLKLNTWLLPLLLLLLPMTAQAADISGVPKIRDGDHALIGKTRIRLAGIDAPGVDQLCLNPKGDRWTCGVAARDALAQHT
AGKSWTCHVLRVDKAGRSIAKCEVDGEDLGRWMVKNGWALAYVQYSHAYEAEEKAAREAKIGLWQGSFIAPWDWRVRSAK
TQILGATKPPKDARRILLASASGPVAPSPDCTIKGNVNKSGECIYHKPTSRWYAQIRMKISKGTRWFCSVEEAEAAGCRE
TRR
>Mature_243_residues
MLKLNTWLLPLLLLLLPMTAQAADISGVPKIRDGDHALIGKTRIRLAGIDAPGVDQLCLNPKGDRWTCGVAARDALAQHT
AGKSWTCHVLRVDKAGRSIAKCEVDGEDLGRWMVKNGWALAYVQYSHAYEAEEKAAREAKIGLWQGSFIAPWDWRVRSAK
TQILGATKPPKDARRILLASASGPVAPSPDCTIKGNVNKSGECIYHKPTSRWYAQIRMKISKGTRWFCSVEEAEAAGCRE
TRR

Specific function: Unknown

COG id: COG1525

COG function: function code L; Micrococcal nuclease (thermonuclease) homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26803; Mature: 26803

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: PS50830 TNASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKLNTWLLPLLLLLLPMTAQAADISGVPKIRDGDHALIGKTRIRLAGIDAPGVDQLCLN
CEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECEEEEEEECCCCCCCCEEEC
PKGDRWTCGVAARDALAQHTAGKSWTCHVLRVDKAGRSIAKCEVDGEDLGRWMVKNGWAL
CCCCEEEECHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEEECHHHHHHHHHCCCEEE
AYVQYSHAYEAEEKAAREAKIGLWQGSFIAPWDWRVRSAKTQILGATKPPKDARRILLAS
EEEEECCCHHHHHHHHHHHEEEEECCCEECCCCCEECCCCEEEEECCCCCHHHHEEEEEE
ASGPVAPSPDCTIKGNVNKSGECIYHKPTSRWYAQIRMKISKGTRWFCSVEEAEAAGCRE
CCCCCCCCCCEEEECCCCCCCCEEEECCCHHEEEEEEEEECCCCEEEEEECHHHCCCCHH
TRR
CCC
>Mature Secondary Structure
MLKLNTWLLPLLLLLLPMTAQAADISGVPKIRDGDHALIGKTRIRLAGIDAPGVDQLCLN
CEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECEEEEEEECCCCCCCCEEEC
PKGDRWTCGVAARDALAQHTAGKSWTCHVLRVDKAGRSIAKCEVDGEDLGRWMVKNGWAL
CCCCEEEECHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEEECHHHHHHHHHCCCEEE
AYVQYSHAYEAEEKAAREAKIGLWQGSFIAPWDWRVRSAKTQILGATKPPKDARRILLAS
EEEEECCCHHHHHHHHHHHEEEEECCCEECCCCCEECCCCEEEEECCCCCHHHHEEEEEE
ASGPVAPSPDCTIKGNVNKSGECIYHKPTSRWYAQIRMKISKGTRWFCSVEEAEAAGCRE
CCCCCCCCCCEEEECCCCCCCCEEEECCCHHEEEEEEEEECCCCEEEEEECHHHCCCCHH
TRR
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA