| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192289286
Identifier: 192289286
GI number: 192289286
Start: 910378
End: 911232
Strand: Reverse
Name: 192289286
Synonym: Rpal_0858
Alternate gene names: NA
Gene position: 911232-910378 (Counterclockwise)
Preceding gene: 192289287
Following gene: 192289285
Centisome position: 15.86
GC content: 65.85
Gene sequence:
>855_bases GTGAACCACACAGCACATGATCCTTCGCGGCCGCAGCGGCCGCGCAAACGCCGGCTGCGGCGGGCGTGGCAGCTTTCGGT GGTGCTGATCGGCTGCTACGCGATCCTCGCCTATCTGGCGCTGCCGCTGTTCTGGACCCATTACGAACACCAGAGCAAAC TCGCCGATATGCCGATGGTGACCCGCACCGCGCAGGGCATTCCCGGCGATCCGATCAATGTCGGGCTGATCGGCGATCAG CACGAGATCGTCTGCGCGATCCTGGCGGCGAACTGGCATCCGGCCGATCCGATCACGCTGCGCTCGTCGATCGCGATCGC CGGCAGCGTGCTGCTCGATCGTCCCTATCCGGACGCACCGGTGTCGAGCCTGTACTACCTCGACCGCCGCGAGGATCTTG CGTTCGAAAAGCCCGACGGGCGAAGCGCCGACCGGCGCAATCATGTGCGGCTGTGGAAAGTGCTCGACAGCGGCCAAGAA GGCCGCCCGGTCTGGCTCGGCAGCGCCACCTTCGACCGCGGAGTCGGCGTCAGCCACTACACCGGCGCAGTGACGCATCA CATCGCACCCGACATCGATGCCGAGCGCGACCAGTTCGCCGCCGATCTGGAAGCCGCCGCAATGGTCGACGCGAAATATC AGATCACCGGCGTCGGCCCGACCATCGCCGGCCGCAACGGCGAAGGCGATTTGTATTACACCGACGGCGAGGTGTGGATC CTGCGGCTGACGGAAGGCTGCAAGAAGCGCAGCAGCCCGGCCGAGATTCTGCCGAGTCCGCTCGCGACCGAGATCAAGGA TCAGATCTTCCGCACCGTCACCAATGCAATCGAGCCCGGCGCGAGCGCGCCTTGA
Upstream 100 bases:
>100_bases GGGCACCCGCTGGTTCTGCTCGGTCGAGGAAGCCGAGGCCGCCGGCTGCCGCGAGACGCGGCGCTAGCCGTCGCAACAGG CGGGGCTGCAGGGGCGGACC
Downstream 100 bases:
>100_bases AATCAATGCTGCAAGCCGGCATGGTCGCGAATCTCTCACAACAGGGACAAGCATCATGGCCGTCAGCGCCGGACGGGAAT TCTTGGCGATTCCCGGCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MNHTAHDPSRPQRPRKRRLRRAWQLSVVLIGCYAILAYLALPLFWTHYEHQSKLADMPMVTRTAQGIPGDPINVGLIGDQ HEIVCAILAANWHPADPITLRSSIAIAGSVLLDRPYPDAPVSSLYYLDRREDLAFEKPDGRSADRRNHVRLWKVLDSGQE GRPVWLGSATFDRGVGVSHYTGAVTHHIAPDIDAERDQFAADLEAAAMVDAKYQITGVGPTIAGRNGEGDLYYTDGEVWI LRLTEGCKKRSSPAEILPSPLATEIKDQIFRTVTNAIEPGASAP
Sequences:
>Translated_284_residues MNHTAHDPSRPQRPRKRRLRRAWQLSVVLIGCYAILAYLALPLFWTHYEHQSKLADMPMVTRTAQGIPGDPINVGLIGDQ HEIVCAILAANWHPADPITLRSSIAIAGSVLLDRPYPDAPVSSLYYLDRREDLAFEKPDGRSADRRNHVRLWKVLDSGQE GRPVWLGSATFDRGVGVSHYTGAVTHHIAPDIDAERDQFAADLEAAAMVDAKYQITGVGPTIAGRNGEGDLYYTDGEVWI LRLTEGCKKRSSPAEILPSPLATEIKDQIFRTVTNAIEPGASAP >Mature_284_residues MNHTAHDPSRPQRPRKRRLRRAWQLSVVLIGCYAILAYLALPLFWTHYEHQSKLADMPMVTRTAQGIPGDPINVGLIGDQ HEIVCAILAANWHPADPITLRSSIAIAGSVLLDRPYPDAPVSSLYYLDRREDLAFEKPDGRSADRRNHVRLWKVLDSGQE GRPVWLGSATFDRGVGVSHYTGAVTHHIAPDIDAERDQFAADLEAAAMVDAKYQITGVGPTIAGRNGEGDLYYTDGEVWI LRLTEGCKKRSSPAEILPSPLATEIKDQIFRTVTNAIEPGASAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31346; Mature: 31346
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHTAHDPSRPQRPRKRRLRRAWQLSVVLIGCYAILAYLALPLFWTHYEHQSKLADMPMV CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH TRTAQGIPGDPINVGLIGDQHEIVCAILAANWHPADPITLRSSIAIAGSVLLDRPYPDAP HHHCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCEEEHHHHHHHHHEEECCCCCCCC VSSLYYLDRREDLAFEKPDGRSADRRNHVRLWKVLDSGQEGRPVWLGSATFDRGVGVSHY HHHEEEECCCCCCCEECCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCHH TGAVTHHIAPDIDAERDQFAADLEAAAMVDAKYQITGVGPTIAGRNGEGDLYYTDGEVWI HCHHHHHCCCCCCCCHHHHHHHHHHHHEECCEEEEEECCCEECCCCCCCCEEEECCCEEE LRLTEGCKKRSSPAEILPSPLATEIKDQIFRTVTNAIEPGASAP EEECHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNHTAHDPSRPQRPRKRRLRRAWQLSVVLIGCYAILAYLALPLFWTHYEHQSKLADMPMV CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH TRTAQGIPGDPINVGLIGDQHEIVCAILAANWHPADPITLRSSIAIAGSVLLDRPYPDAP HHHCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCEEEHHHHHHHHHEEECCCCCCCC VSSLYYLDRREDLAFEKPDGRSADRRNHVRLWKVLDSGQEGRPVWLGSATFDRGVGVSHY HHHEEEECCCCCCCEECCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCHH TGAVTHHIAPDIDAERDQFAADLEAAAMVDAKYQITGVGPTIAGRNGEGDLYYTDGEVWI HCHHHHHCCCCCCCCHHHHHHHHHHHHEECCEEEEEECCCEECCCCCCCCEEEECCCEEE LRLTEGCKKRSSPAEILPSPLATEIKDQIFRTVTNAIEPGASAP EEECHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA