Click here to switch to the map view.

The map label for this gene is 192289288

Identifier: 192289288

GI number: 192289288

Start: 912111

End: 913850

Strand: Reverse

Name: 192289288

Synonym: Rpal_0860

Alternate gene names: NA

Gene position: 913850-912111 (Counterclockwise)

Preceding gene: 192289290

Following gene: 192289287

Centisome position: 15.91

GC content: 65.17

Gene sequence:

>1740_bases
ATGGATGTGCTGAAGATGGCCGGCGCGGCGTACCGCGCGCTGACCGCCCGGAAACAAGCGCCGACGCTGTATGACCTGTG
CGATCCGGTATTCCTCGGCCACAAGCACGGCGATCCGCACATCTCCAAATTCTATAAGACCTCGCTCGCCAACCCGGCGC
TGCGGCCGCTGCTGCGCAAAGCCGGTCTGCCGGAGCTGCACGACCCGGTACGGTTTCGTGCCGTTCGCGACGCACTGATC
AGCGCCCGCGACGACGCCGAGCCGAATTGGGCTGCGATCGGCGCACCGATCGCCGAGCTGATCGACACCATCAGGCTGGA
GCACCCGCGGCCGCCGAGCTGGGTGGCGCCGGCGCAGACGCCGCGGCTTGCCGATATCGACAGCGCGATCCGCGCCTGCG
GCGATCATTTGCTGCAATCCTGGAGCCGCAACGGCTTCCTGCCGGCCCATGCGTCGTTCAATCTAATCGGCGATGCGGAT
CTCGATGGCCGTGCGTTTCTCGCGGCACTGACCGGGCTGAATTCGCGCAGCTACAAGAACTCGACGCTGCTGTTCAATCT
GGCGCGCGTGTTCATCGCACGGTCTCCGGCAGAAGGCGTGATCAATCCGCGCTGGCGCGGCATCGCCGAGCCGATGTGGT
CGCCGGTGCAGATCCGGCATCGGTCGGCCTATTACGATGCGTTCTACATCGAGGCGCTGCTCGGTTTCATCGATTCCGGC
CTCGGTACGCCCGACGACACCCGCGCGGCGCGGCGGATGATCGCCGACATGACCGAATTCTGCCTGAAGACCAGCCGCGA
GCGTGTCCGCACGGCCGAGGGCGAACCGTTCGACGTGATCACCGCACTAGCCCCGCCGCCGCATTCGCGGTTTTCGCGGT
TCTTCGCCAAGGTCAAACAGAACGTCGGCTTCGGCGTGTACGTGCCGGATTGCGACACCACCGCCTGTTCAATCTCGGCC
GCCACCCAGGCGAACTCGTCCGATCCGATCATCGATCAGCCGCTGATCGATCTTTATCGTGCCTATCAGGTCCGCACAGG
CGGCAACGCCCCGATGGTGACGGTGCCGCTCAATGACACCATCGACTACGACGGCGGAATCGTCACCTGGATCGACAGCC
TGGCTGGCGAACGCCCGTTCGGCAACGACCTCGATCCGACGCTCAATCTCGACGTGCTCGAAGTCTGCTTCCGCAATTGT
GCGCGGTGGCGGATCGTCGAGACGCCCGCGCGGCTGGACACGGTGCGCCGTATCGTGGATTTCCAGCGCCGGCTGGTAGC
GAGCGGAGCGTTCGCCGATTCGAAATCGCACGTGTACTACCTGCCCGAACTGTACTGCGCCTATTTCGGCCGCTGCTACG
TGGCGTTCCGGGCGCTCGACGAAACCGCCAAGCGCGCGATCGATCCGGACGGCGTGTTCGAGGCGATCCGGCTGCGCGTG
CTGGCTTACGTGCAGGACGAACTGATCGCCAAGGAGATGAACGTGTTCGACGCCGCGCTGGCGTTGATTGCGCTCGGCCA
TCTCTGCGGCGACATCCAGCACTTCGCGCCGGCGCTGCATTGCATCCTAAGCCATCTCGGCGAAGGCGGCGGCCGCGCGC
CGTTCAAAGCCTATGAGTGGAACAAGATGAAGACGCCGACCCGCATTCTGGTCGGCGGACCGGAAGTGACCTCGGCTTTC
GTGCTGCTGGGGCTGGCGCTGGCGCGCAAGGCGCTGCTGCAGCCTGTGCAGCAAGCCTGA

Upstream 100 bases:

>100_bases
CGACGAGAACCAGTCCGGCGACGGCCGCGGGTTTGTATTCCCGGTCCGTCCATGCGATTCCTCGTCGGCTCGAACGTGTC
AGAGCGCGCGGAAGACGATC

Downstream 100 bases:

>100_bases
TCTTCGCGCGAAGTTGAAGCAAGGTGCTGCCGAGGCTCTGGCCCGGCCGCCCAAGATTCAGCACAATCGGCGAACCTGTT
TGCGGCACGGGTGCCTGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 579; Mature: 579

Protein sequence:

>579_residues
MDVLKMAGAAYRALTARKQAPTLYDLCDPVFLGHKHGDPHISKFYKTSLANPALRPLLRKAGLPELHDPVRFRAVRDALI
SARDDAEPNWAAIGAPIAELIDTIRLEHPRPPSWVAPAQTPRLADIDSAIRACGDHLLQSWSRNGFLPAHASFNLIGDAD
LDGRAFLAALTGLNSRSYKNSTLLFNLARVFIARSPAEGVINPRWRGIAEPMWSPVQIRHRSAYYDAFYIEALLGFIDSG
LGTPDDTRAARRMIADMTEFCLKTSRERVRTAEGEPFDVITALAPPPHSRFSRFFAKVKQNVGFGVYVPDCDTTACSISA
ATQANSSDPIIDQPLIDLYRAYQVRTGGNAPMVTVPLNDTIDYDGGIVTWIDSLAGERPFGNDLDPTLNLDVLEVCFRNC
ARWRIVETPARLDTVRRIVDFQRRLVASGAFADSKSHVYYLPELYCAYFGRCYVAFRALDETAKRAIDPDGVFEAIRLRV
LAYVQDELIAKEMNVFDAALALIALGHLCGDIQHFAPALHCILSHLGEGGGRAPFKAYEWNKMKTPTRILVGGPEVTSAF
VLLGLALARKALLQPVQQA

Sequences:

>Translated_579_residues
MDVLKMAGAAYRALTARKQAPTLYDLCDPVFLGHKHGDPHISKFYKTSLANPALRPLLRKAGLPELHDPVRFRAVRDALI
SARDDAEPNWAAIGAPIAELIDTIRLEHPRPPSWVAPAQTPRLADIDSAIRACGDHLLQSWSRNGFLPAHASFNLIGDAD
LDGRAFLAALTGLNSRSYKNSTLLFNLARVFIARSPAEGVINPRWRGIAEPMWSPVQIRHRSAYYDAFYIEALLGFIDSG
LGTPDDTRAARRMIADMTEFCLKTSRERVRTAEGEPFDVITALAPPPHSRFSRFFAKVKQNVGFGVYVPDCDTTACSISA
ATQANSSDPIIDQPLIDLYRAYQVRTGGNAPMVTVPLNDTIDYDGGIVTWIDSLAGERPFGNDLDPTLNLDVLEVCFRNC
ARWRIVETPARLDTVRRIVDFQRRLVASGAFADSKSHVYYLPELYCAYFGRCYVAFRALDETAKRAIDPDGVFEAIRLRV
LAYVQDELIAKEMNVFDAALALIALGHLCGDIQHFAPALHCILSHLGEGGGRAPFKAYEWNKMKTPTRILVGGPEVTSAF
VLLGLALARKALLQPVQQA
>Mature_579_residues
MDVLKMAGAAYRALTARKQAPTLYDLCDPVFLGHKHGDPHISKFYKTSLANPALRPLLRKAGLPELHDPVRFRAVRDALI
SARDDAEPNWAAIGAPIAELIDTIRLEHPRPPSWVAPAQTPRLADIDSAIRACGDHLLQSWSRNGFLPAHASFNLIGDAD
LDGRAFLAALTGLNSRSYKNSTLLFNLARVFIARSPAEGVINPRWRGIAEPMWSPVQIRHRSAYYDAFYIEALLGFIDSG
LGTPDDTRAARRMIADMTEFCLKTSRERVRTAEGEPFDVITALAPPPHSRFSRFFAKVKQNVGFGVYVPDCDTTACSISA
ATQANSSDPIIDQPLIDLYRAYQVRTGGNAPMVTVPLNDTIDYDGGIVTWIDSLAGERPFGNDLDPTLNLDVLEVCFRNC
ARWRIVETPARLDTVRRIVDFQRRLVASGAFADSKSHVYYLPELYCAYFGRCYVAFRALDETAKRAIDPDGVFEAIRLRV
LAYVQDELIAKEMNVFDAALALIALGHLCGDIQHFAPALHCILSHLGEGGGRAPFKAYEWNKMKTPTRILVGGPEVTSAF
VLLGLALARKALLQPVQQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63955; Mature: 63955

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVLKMAGAAYRALTARKQAPTLYDLCDPVFLGHKHGDPHISKFYKTSLANPALRPLLRK
CCHHHHHHHHHHHHHHHHCCCCHHHHHCHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHH
AGLPELHDPVRFRAVRDALISARDDAEPNWAAIGAPIAELIDTIRLEHPRPPSWVAPAQT
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCC
PRLADIDSAIRACGDHLLQSWSRNGFLPAHASFNLIGDADLDGRAFLAALTGLNSRSYKN
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCC
STLLFNLARVFIARSPAEGVINPRWRGIAEPMWSPVQIRHRSAYYDAFYIEALLGFIDSG
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
LGTPDDTRAARRMIADMTEFCLKTSRERVRTAEGEPFDVITALAPPPHSRFSRFFAKVKQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHH
NVGFGVYVPDCDTTACSISAATQANSSDPIIDQPLIDLYRAYQVRTGGNAPMVTVPLNDT
CCCCEEEECCCCCCCEEEEHHHCCCCCCCCCCCHHHHHHHHHHEECCCCCCEEEEECCCC
IDYDGGIVTWIDSLAGERPFGNDLDPTLNLDVLEVCFRNCARWRIVETPARLDTVRRIVD
CCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCHHHHHHHHHHHH
FQRRLVASGAFADSKSHVYYLPELYCAYFGRCYVAFRALDETAKRAIDPDGVFEAIRLRV
HHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LAYVQDELIAKEMNVFDAALALIALGHLCGDIQHFAPALHCILSHLGEGGGRAPFKAYEW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
NKMKTPTRILVGGPEVTSAFVLLGLALARKALLQPVQQA
CCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDVLKMAGAAYRALTARKQAPTLYDLCDPVFLGHKHGDPHISKFYKTSLANPALRPLLRK
CCHHHHHHHHHHHHHHHHCCCCHHHHHCHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHH
AGLPELHDPVRFRAVRDALISARDDAEPNWAAIGAPIAELIDTIRLEHPRPPSWVAPAQT
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCC
PRLADIDSAIRACGDHLLQSWSRNGFLPAHASFNLIGDADLDGRAFLAALTGLNSRSYKN
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCC
STLLFNLARVFIARSPAEGVINPRWRGIAEPMWSPVQIRHRSAYYDAFYIEALLGFIDSG
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
LGTPDDTRAARRMIADMTEFCLKTSRERVRTAEGEPFDVITALAPPPHSRFSRFFAKVKQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHH
NVGFGVYVPDCDTTACSISAATQANSSDPIIDQPLIDLYRAYQVRTGGNAPMVTVPLNDT
CCCCEEEECCCCCCCEEEEHHHCCCCCCCCCCCHHHHHHHHHHEECCCCCCEEEEECCCC
IDYDGGIVTWIDSLAGERPFGNDLDPTLNLDVLEVCFRNCARWRIVETPARLDTVRRIVD
CCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCHHHHHHHHHHHH
FQRRLVASGAFADSKSHVYYLPELYCAYFGRCYVAFRALDETAKRAIDPDGVFEAIRLRV
HHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LAYVQDELIAKEMNVFDAALALIALGHLCGDIQHFAPALHCILSHLGEGGGRAPFKAYEW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
NKMKTPTRILVGGPEVTSAFVLLGLALARKALLQPVQQA
CCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA