| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is yeaZ [H]
Identifier: 192288887
GI number: 192288887
Start: 490616
End: 491311
Strand: Reverse
Name: yeaZ [H]
Synonym: Rpal_0456
Alternate gene names: 192288887
Gene position: 491311-490616 (Counterclockwise)
Preceding gene: 192288888
Following gene: 192288886
Centisome position: 8.55
GC content: 67.96
Gene sequence:
>696_bases ATGCTGATCCTCGCCATCGATACGGCGCTCGACGCCTGCGCAGCAGCGGTGCTGGACACCGAGGCAAATCGGCTGCTCGC GGGCGAATCTCAAGCGATGCAGCGCGGTCACGCCGAAGCCTTGATGCCTCTGCTCGGCCGGGTAATGGACGCGTCGGGAA TCGGCTTTCTCGATATCGACCGCATCGCGGTAACCACGGGGCCTGGTAGCTTCACCGGCCTCCGGGTCGGCCTGTCGGCA GCGCGCGGCATCGCACTCGCGGCCGCAAAACCGGTCGTCGGGCTGACGACGCTGTCGGCTTTCGCGGCGCCCCTGGTGAG CGAAACCGACGAGACCCCGATCCTGTCGGTGATCGATGCCCGTCACGACCACGTCTACTACCAGCTCGTCGCCGGCAACG GCACAATGATCGTGCGCCCGCGGGTGGCGCCGATCGCCGAAGCGCTGGAATCAGCACGTTATGGTGCGCCGCGGCTGGTT GGCAACGCCGCCCAGCTGATTGCCGATCGCTGGCCGGCCCTGACTCCGCCGCCGCTCGCGGTTGATCAGCGCCCCGCCCC GGATATCGGCTGGCTCGCTTGGCTTGGTGCAGCAGCAACGCCGGAAGCCGCGCCTGCCAAGCCGTTCTATCTGCGGCCAC CGGACGCCAAGCCGAAGATCGATCCCATCGCTCAATCGGCGCAGCCCGCCGCATGA
Upstream 100 bases:
>100_bases AACAGGCATGACGCTCCGCGCCATGCCGCCCATCCGAATAGTTGTCGATCGCCCCGGCCGGGACATGACGCAACCGTCGC ATTACTGATATGTTAGCCGG
Downstream 100 bases:
>100_bases CGCGCTGCCGTATGTGCCATCAATGATGACTTGGCTGGCCGAATTCTGGGGCTACGCCGACACCGTGGTCGAAACGGCGA CGCTGCGCGACGCGCCGAAG
Product: peptidase M22 glycoprotease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MLILAIDTALDACAAAVLDTEANRLLAGESQAMQRGHAEALMPLLGRVMDASGIGFLDIDRIAVTTGPGSFTGLRVGLSA ARGIALAAAKPVVGLTTLSAFAAPLVSETDETPILSVIDARHDHVYYQLVAGNGTMIVRPRVAPIAEALESARYGAPRLV GNAAQLIADRWPALTPPPLAVDQRPAPDIGWLAWLGAAATPEAAPAKPFYLRPPDAKPKIDPIAQSAQPAA
Sequences:
>Translated_231_residues MLILAIDTALDACAAAVLDTEANRLLAGESQAMQRGHAEALMPLLGRVMDASGIGFLDIDRIAVTTGPGSFTGLRVGLSA ARGIALAAAKPVVGLTTLSAFAAPLVSETDETPILSVIDARHDHVYYQLVAGNGTMIVRPRVAPIAEALESARYGAPRLV GNAAQLIADRWPALTPPPLAVDQRPAPDIGWLAWLGAAATPEAAPAKPFYLRPPDAKPKIDPIAQSAQPAA >Mature_231_residues MLILAIDTALDACAAAVLDTEANRLLAGESQAMQRGHAEALMPLLGRVMDASGIGFLDIDRIAVTTGPGSFTGLRVGLSA ARGIALAAAKPVVGLTTLSAFAAPLVSETDETPILSVIDARHDHVYYQLVAGNGTMIVRPRVAPIAEALESARYGAPRLV GNAAQLIADRWPALTPPPLAVDQRPAPDIGWLAWLGAAATPEAAPAKPFYLRPPDAKPKIDPIAQSAQPAA
Specific function: Unknown
COG id: COG1214
COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M22 family [H]
Homologues:
Organism=Escherichia coli, GI1788109, Length=127, Percent_Identity=36.2204724409449, Blast_Score=88, Evalue=4e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022496 - InterPro: IPR000905 [H]
Pfam domain/function: PF00814 Peptidase_M22 [H]
EC number: NA
Molecular weight: Translated: 23930; Mature: 23930
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLILAIDTALDACAAAVLDTEANRLLAGESQAMQRGHAEALMPLLGRVMDASGIGFLDID CEEEEEHHHHHHHHHHHHHCCCCCEECCCHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEC RIAVTTGPGSFTGLRVGLSAARGIALAAAKPVVGLTTLSAFAAPLVSETDETPILSVIDA EEEEECCCCCCHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHC RHDHVYYQLVAGNGTMIVRPRVAPIAEALESARYGAPRLVGNAAQLIADRWPALTPPPLA CCCEEEEEEEECCCEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCC VDQRPAPDIGWLAWLGAAATPEAAPAKPFYLRPPDAKPKIDPIAQSAQPAA CCCCCCCCHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCHHHCCCCCCC >Mature Secondary Structure MLILAIDTALDACAAAVLDTEANRLLAGESQAMQRGHAEALMPLLGRVMDASGIGFLDID CEEEEEHHHHHHHHHHHHHCCCCCEECCCHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEC RIAVTTGPGSFTGLRVGLSAARGIALAAAKPVVGLTTLSAFAAPLVSETDETPILSVIDA EEEEECCCCCCHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHC RHDHVYYQLVAGNGTMIVRPRVAPIAEALESARYGAPRLVGNAAQLIADRWPALTPPPLA CCCEEEEEEEECCCEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCC VDQRPAPDIGWLAWLGAAATPEAAPAKPFYLRPPDAKPKIDPIAQSAQPAA CCCCCCCCHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]