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The map label for this gene is yhgI [C]

Identifier: 192288888

GI number: 192288888

Start: 491447

End: 492013

Strand: Reverse

Name: yhgI [C]

Synonym: Rpal_0457

Alternate gene names: 192288888

Gene position: 492013-491447 (Counterclockwise)

Preceding gene: 192288889

Following gene: 192288887

Centisome position: 8.57

GC content: 64.2

Gene sequence:

>567_bases
ATGTTCATTCAGACCGAACCGACCCCCAATCCAGCCACGTTGAAGTTCATTCCCGGCCGGAGAGTGCTCGACAGCGGGAC
GCTGGAATTCACGGACGCGTCCCAGGCCGCACGCTCGCCGCTCGCGGCGCGGCTGTTCGACATCGATGGTGTCAGCGGCG
TGTTCTACGGCACCGACTTCGTGACCGTCACCAAGGACAAGGGCGAGTGGCAGCACCTCAAGCCCGCGATCCTCGGCGCC
ATCATGGAGCACTACATGTCGGGCACGCCGATCCTGGCCGACGGCAAGTCGGACGGTGAAGACGGCGACGACGACGAGTT
CTATGCCGATGCTGACGCCGAGACGGTCGAGATCATCAAGGATCTGATCGAAACGCGGGTGCGTCCGGCGGTCGCCAACG
ACGGCGGCGATATCACCTTCCGCGGCTTCAAGGACGGCATCGTCTATCTCAACATGCGCGGCGCCTGCGCGGGCTGCCCG
TCGTCGACGGCGACCTTGCAGCACGGCATCCAGAACCTGCTGAAGCACTTCGTGCCCGAAGTGGTGGAAGTTCGCCCGGT
CACCTGA

Upstream 100 bases:

>100_bases
CCCTCCGGGAGAGCCCGCGGGTTGACCGTGCGTTTCCGAGCGCTATTTGCTAGGAGAAACTCACGCACCGGCCTTGAACC
GGCGACGATGGAGATATTCG

Downstream 100 bases:

>100_bases
CCCGGCGACTGCCGCAACGCTAGGCAAGCACGACAAACAGGCATGACGCTCCGCGCCATGCCGCCCATCCGAATAGTTGT
CGATCGCCCCGGCCGGGACA

Product: Scaffold protein Nfu/NifU

Products: NA

Alternate protein names: NifU Domain Protein; NifU Domain-Containing Protein; Nitrogen-Fixing NifU Domain Protein; Nitrogen-Fixing NifU-Like; Nitrogen Fixation Protein; NifU-Like Protein; NifU Related Protein; NifU-Like Domain Protein; NifU-Like Domain-Containing Protein; NifU Protein; Nitrogen-Fixing NifU-Like Protein; Scaffold Protein Nfu/Nifu; NifU Family Protein; Thioredoxin-Like Protein; Nitrogen-Fixing NifU; NifU Iron-Sulphur Cluster Scaffold Protein; Nif System Fes Cluster Assembly Nifu Family Protein; Thioredoxin-Related Protein; Thioredoxin-Like Domain Protein; Scaffold Protein Nfu/NifU N Terminal Domain Protein; Nitrogen-Fixing Nifu Domain Protein; Nitrogen-Fixing NifU Domain-Containing Protein; Nitrogen Fixing Thioredoxin-Like Protein NifU; Nitrogen-Fixing Protein; NFU1 Iron-Sulfur Cluster Scaffold-Like Protein; Fe-S Cluster Assembly Protein NFU; Nifu Protein; NifU Domain Containing Protein; HIRA-Interacting; Nitrogen-Fixing NifU C-Terminal; Scaffold Protein Nfu/NifU-Like Protein; Scaffold Protein Nfu/NifU N Terminal; NitrogeN-Fixing Nifu Domain Protein; Thioredoxin

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MFIQTEPTPNPATLKFIPGRRVLDSGTLEFTDASQAARSPLAARLFDIDGVSGVFYGTDFVTVTKDKGEWQHLKPAILGA
IMEHYMSGTPILADGKSDGEDGDDDEFYADADAETVEIIKDLIETRVRPAVANDGGDITFRGFKDGIVYLNMRGACAGCP
SSTATLQHGIQNLLKHFVPEVVEVRPVT

Sequences:

>Translated_188_residues
MFIQTEPTPNPATLKFIPGRRVLDSGTLEFTDASQAARSPLAARLFDIDGVSGVFYGTDFVTVTKDKGEWQHLKPAILGA
IMEHYMSGTPILADGKSDGEDGDDDEFYADADAETVEIIKDLIETRVRPAVANDGGDITFRGFKDGIVYLNMRGACAGCP
SSTATLQHGIQNLLKHFVPEVVEVRPVT
>Mature_188_residues
MFIQTEPTPNPATLKFIPGRRVLDSGTLEFTDASQAARSPLAARLFDIDGVSGVFYGTDFVTVTKDKGEWQHLKPAILGA
IMEHYMSGTPILADGKSDGEDGDDDEFYADADAETVEIIKDLIETRVRPAVANDGGDITFRGFKDGIVYLNMRGACAGCP
SSTATLQHGIQNLLKHFVPEVVEVRPVT

Specific function: Unknown

COG id: COG0694

COG function: function code O; Thioredoxin-like proteins and domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI50593025, Length=183, Percent_Identity=49.7267759562842, Blast_Score=194, Evalue=3e-50,
Organism=Homo sapiens, GI50593021, Length=183, Percent_Identity=49.7267759562842, Blast_Score=194, Evalue=4e-50,
Organism=Homo sapiens, GI50593023, Length=106, Percent_Identity=44.3396226415094, Blast_Score=104, Evalue=6e-23,
Organism=Homo sapiens, GI50593019, Length=106, Percent_Identity=44.3396226415094, Blast_Score=104, Evalue=6e-23,
Organism=Caenorhabditis elegans, GI17541876, Length=188, Percent_Identity=46.2765957446808, Blast_Score=181, Evalue=2e-46,
Organism=Saccharomyces cerevisiae, GI6322811, Length=203, Percent_Identity=35.9605911330049, Blast_Score=122, Evalue=3e-29,
Organism=Drosophila melanogaster, GI45551492, Length=189, Percent_Identity=48.6772486772487, Blast_Score=188, Evalue=2e-48,
Organism=Drosophila melanogaster, GI24643765, Length=189, Percent_Identity=48.6772486772487, Blast_Score=188, Evalue=2e-48,
Organism=Drosophila melanogaster, GI45556188, Length=189, Percent_Identity=48.6772486772487, Blast_Score=188, Evalue=2e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20362; Mature: 20362

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIQTEPTPNPATLKFIPGRRVLDSGTLEFTDASQAARSPLAARLFDIDGVSGVFYGTDF
CCCCCCCCCCCCEEEECCCCEEECCCCEEECCHHHHHHCCHHHEEECCCCCCEEEECCEE
VTVTKDKGEWQHLKPAILGAIMEHYMSGTPILADGKSDGEDGDDDEFYADADAETVEIIK
EEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEECCCCHHHHHHH
DLIETRVRPAVANDGGDITFRGFKDGIVYLNMRGACAGCPSSTATLQHGIQNLLKHFVPE
HHHHHHCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH
VVEVRPVT
HHEECCCC
>Mature Secondary Structure
MFIQTEPTPNPATLKFIPGRRVLDSGTLEFTDASQAARSPLAARLFDIDGVSGVFYGTDF
CCCCCCCCCCCCEEEECCCCEEECCCCEEECCHHHHHHCCHHHEEECCCCCCEEEECCEE
VTVTKDKGEWQHLKPAILGAIMEHYMSGTPILADGKSDGEDGDDDEFYADADAETVEIIK
EEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEECCCCHHHHHHH
DLIETRVRPAVANDGGDITFRGFKDGIVYLNMRGACAGCPSSTATLQHGIQNLLKHFVPE
HHHHHHCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH
VVEVRPVT
HHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA