Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

Click here to switch to the map view.

The map label for this gene is rimI [H]

Identifier: 192288886

GI number: 192288886

Start: 490108

End: 490593

Strand: Reverse

Name: rimI [H]

Synonym: Rpal_0455

Alternate gene names: 192288886

Gene position: 490593-490108 (Counterclockwise)

Preceding gene: 192288887

Following gene: 192288885

Centisome position: 8.54

GC content: 60.08

Gene sequence:

>486_bases
ATGATGACTTGGCTGGCCGAATTCTGGGGCTACGCCGACACCGTGGTCGAAACGGCGACGCTGCGCGACGCGCCGAAGCT
CGCCGAGCTTCATGCTGCTTCGTTTCATCGCGGCTGGGACGAGCAGGAATTCGCCGACCTTTTGAGCGAGCGCAATACGC
TGGTGCACAGACTGCGGGTCGGCCGGCGAATCATCGGATTTGTTGCATCGCGGATCGGCGCGGACGAAGCCGAAATCCTA
TCAATTGCGGTCGCCGCCTCGTATCGGGGCCGCGGTCTGTCGCGTGAAATGCTCCTCACTCACCTCGGTCATCTCGCAGG
ACGTGGCGTTGCCACGGTGTTTCTCGAGGTGGAAGAAAACAATCAGCCGGCACGGCGACTCTACAATCGTACCGGTTTTC
AGGTGGTTGGCCGGCGCGAGCGCTATTACCGACAGCCCAATGGGGAACAATTGAACGCATTGATAATGCGTCGCGACTTG
TCCTGA

Upstream 100 bases:

>100_bases
AAGCCGTTCTATCTGCGGCCACCGGACGCCAAGCCGAAGATCGATCCCATCGCTCAATCGGCGCAGCCCGCCGCATGACG
CGCTGCCGTATGTGCCATCA

Downstream 100 bases:

>100_bases
TCGCCCTGCAGTGGCAGAACAATGACCAAGATAACCATTCACCCGCAACCACGTTGACGCCGATGTCCGAACCCAAGGCA
ACTGAAATCGAAGCCCGCTG

Product: ribosomal-protein-alanine acetyltransferase

Products: NA

Alternate protein names: Acetylating enzyme for N-terminal of ribosomal protein S18 [H]

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MMTWLAEFWGYADTVVETATLRDAPKLAELHAASFHRGWDEQEFADLLSERNTLVHRLRVGRRIIGFVASRIGADEAEIL
SIAVAASYRGRGLSREMLLTHLGHLAGRGVATVFLEVEENNQPARRLYNRTGFQVVGRRERYYRQPNGEQLNALIMRRDL
S

Sequences:

>Translated_161_residues
MMTWLAEFWGYADTVVETATLRDAPKLAELHAASFHRGWDEQEFADLLSERNTLVHRLRVGRRIIGFVASRIGADEAEIL
SIAVAASYRGRGLSREMLLTHLGHLAGRGVATVFLEVEENNQPARRLYNRTGFQVVGRRERYYRQPNGEQLNALIMRRDL
S
>Mature_161_residues
MMTWLAEFWGYADTVVETATLRDAPKLAELHAASFHRGWDEQEFADLLSERNTLVHRLRVGRRIIGFVASRIGADEAEIL
SIAVAASYRGRGLSREMLLTHLGHLAGRGVATVFLEVEENNQPARRLYNRTGFQVVGRRERYYRQPNGEQLNALIMRRDL
S

Specific function: This enzyme acetylates the N-terminal alanine of a ribosomal protein S18 [H]

COG id: COG0456

COG function: function code R; Acetyltransferases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

Organism=Escherichia coli, GI2367381, Length=123, Percent_Identity=34.9593495934959, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181
- InterPro:   IPR006464 [H]

Pfam domain/function: PF00583 Acetyltransf_1 [H]

EC number: =2.3.1.128 [H]

Molecular weight: Translated: 18368; Mature: 18368

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTWLAEFWGYADTVVETATLRDAPKLAELHAASFHRGWDEQEFADLLSERNTLVHRLRV
CCCHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
GRRIIGFVASRIGADEAEILSIAVAASYRGRGLSREMLLTHLGHLAGRGVATVFLEVEEN
HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCC
NQPARRLYNRTGFQVVGRRERYYRQPNGEQLNALIMRRDLS
CCHHHHHHHCCCHHHHCCHHHHHCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MMTWLAEFWGYADTVVETATLRDAPKLAELHAASFHRGWDEQEFADLLSERNTLVHRLRV
CCCHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
GRRIIGFVASRIGADEAEILSIAVAASYRGRGLSREMLLTHLGHLAGRGVATVFLEVEEN
HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCC
NQPARRLYNRTGFQVVGRRERYYRQPNGEQLNALIMRRDLS
CCHHHHHHHCCCHHHHCCHHHHHCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA