| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
Click here to switch to the map view.
The map label for this gene is 192288780
Identifier: 192288780
GI number: 192288780
Start: 368431
End: 369174
Strand: Reverse
Name: 192288780
Synonym: Rpal_0349
Alternate gene names: NA
Gene position: 369174-368431 (Counterclockwise)
Preceding gene: 192288781
Following gene: 192288779
Centisome position: 6.43
GC content: 66.4
Gene sequence:
>744_bases ATGCTCGACGCCGCCATCAAGGCGCTGACCCAGATTCTATCGCCGCCGATGCGCTCGATCCTGTGGCGCTCGGTCGGCTT TGCGCTGGCCTTGATCGCGGTGGCGGCGATCGGATTGCAACGGCTGTTGAGCTGGGCGGCCACGTCAAGCGAGCTCTGGG CCGAGGCGGCGCTGGGCGGCTTCCAGACCCCGCTGTATATCCTGTCCTGGGTGCTGTCGATCGCTGCCGGCCTCGGCATC GTGGTCGGCGCTGTGTTCCTGATGCCGGCGGTGACCTCACTGGTCGCCGGCATCTTCGTCGACGAGGCGGCCGAGCACGT CGAACGTGAATCCTATCCGCACGAAGCGCCGGGCGTCGCACTCCCGATCGGCCTTGCGACCTGGGAAACGGTGAAGACCG CGCTGCTGACCATCCTGGTGTACCTAGTGGCGCTGCCGTTCCTGTTCGTCGCCGGCGCGGGCGCAATCGTGTTCTTCGTC GCGACCGCGTGGCTGCTCGGCCGGGAATATTTCGAACTCGCCGCGATGCGTTTCCGCACCGCGCCGGAAGCCAAGGCGAT GCGGCGCGACAACGCCACCACGGTGTTCATCGGCGGCCTGATCATCGCGGCTTTCGTGTCGATCCCGATCGTCAATCTGG CGACGCCGCTGTTCGGCATGGCCTTCATGGTCCATCTGCACAAGCGGTTGTCAGGATCACGCCCCGAAGTGCTGGCGCCG GATCAGCGCAGCATGCGGCGCTAG
Upstream 100 bases:
>100_bases GCTGCAACGGTAGGCGCGCGCCGCAGACATCCCGGCCCTTGCCGAACATCGGCGCGGTCTCTACCTGTTCGAGGCTGTTT TTCGGGACGAGGACGCCGCC
Downstream 100 bases:
>100_bases GCCGCGTCAGACGTGCGCCCGGTGTCAGTCGTTTCGCGGAGCGCCGCGCAGCTTGCGGCGAACTACGGACGACACCTCCT GCACGGCACCGCCGACGATC
Product: CysZ-like protein
Products: NA
Alternate protein names: Carbamoyl-Phosphate Synthase Large Chain; CysZ Protein
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MLDAAIKALTQILSPPMRSILWRSVGFALALIAVAAIGLQRLLSWAATSSELWAEAALGGFQTPLYILSWVLSIAAGLGI VVGAVFLMPAVTSLVAGIFVDEAAEHVERESYPHEAPGVALPIGLATWETVKTALLTILVYLVALPFLFVAGAGAIVFFV ATAWLLGREYFELAAMRFRTAPEAKAMRRDNATTVFIGGLIIAAFVSIPIVNLATPLFGMAFMVHLHKRLSGSRPEVLAP DQRSMRR
Sequences:
>Translated_247_residues MLDAAIKALTQILSPPMRSILWRSVGFALALIAVAAIGLQRLLSWAATSSELWAEAALGGFQTPLYILSWVLSIAAGLGI VVGAVFLMPAVTSLVAGIFVDEAAEHVERESYPHEAPGVALPIGLATWETVKTALLTILVYLVALPFLFVAGAGAIVFFV ATAWLLGREYFELAAMRFRTAPEAKAMRRDNATTVFIGGLIIAAFVSIPIVNLATPLFGMAFMVHLHKRLSGSRPEVLAP DQRSMRR >Mature_247_residues MLDAAIKALTQILSPPMRSILWRSVGFALALIAVAAIGLQRLLSWAATSSELWAEAALGGFQTPLYILSWVLSIAAGLGI VVGAVFLMPAVTSLVAGIFVDEAAEHVERESYPHEAPGVALPIGLATWETVKTALLTILVYLVALPFLFVAGAGAIVFFV ATAWLLGREYFELAAMRFRTAPEAKAMRRDNATTVFIGGLIIAAFVSIPIVNLATPLFGMAFMVHLHKRLSGSRPEVLAP DQRSMRR
Specific function: Unknown
COG id: COG2981
COG function: function code E; Uncharacterized protein involved in cysteine biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26529; Mature: 26529
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDAAIKALTQILSPPMRSILWRSVGFALALIAVAAIGLQRLLSWAATSSELWAEAALGG CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC FQTPLYILSWVLSIAAGLGIVVGAVFLMPAVTSLVAGIFVDEAAEHVERESYPHEAPGVA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE LPIGLATWETVKTALLTILVYLVALPFLFVAGAGAIVFFVATAWLLGREYFELAAMRFRT EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC APEAKAMRRDNATTVFIGGLIIAAFVSIPIVNLATPLFGMAFMVHLHKRLSGSRPEVLAP CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC DQRSMRR CHHHHCC >Mature Secondary Structure MLDAAIKALTQILSPPMRSILWRSVGFALALIAVAAIGLQRLLSWAATSSELWAEAALGG CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC FQTPLYILSWVLSIAAGLGIVVGAVFLMPAVTSLVAGIFVDEAAEHVERESYPHEAPGVA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE LPIGLATWETVKTALLTILVYLVALPFLFVAGAGAIVFFVATAWLLGREYFELAAMRFRT EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC APEAKAMRRDNATTVFIGGLIIAAFVSIPIVNLATPLFGMAFMVHLHKRLSGSRPEVLAP CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC DQRSMRR CHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA