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The map label for this gene is rsmI [H]

Identifier: 192288757

GI number: 192288757

Start: 345481

End: 346437

Strand: Reverse

Name: rsmI [H]

Synonym: Rpal_0326

Alternate gene names: 192288757

Gene position: 346437-345481 (Counterclockwise)

Preceding gene: 192288759

Following gene: 192288756

Centisome position: 6.03

GC content: 65.83

Gene sequence:

>957_bases
ATGCGCGTCAAACCAGAAATTTCAGCACCGCCGCCCGCTGCGGCGGAACCGAACGCACGAACGTTTCTGGTCGCCGGCCA
ACGTCTGGTCGCCCCACGCATCGCACCGGGACTGCATCTCGTCGCCACCCCGATCGGTCATCTCGGCGACATCACGCTAC
GTGCGCTGGAAACGCTCGCCGGTGCCGATCTGATCGCTTGCGAAGATACACGAATTACGCACCGCTTGCTCGAACGATAT
GGCATCTCGGCACGGCTGAAGCCGTACCACGAGCACAATGCCGCTCAGGCGCGGCCGAAGCTTCTGGAGATGCTGGCGCA
GGGTCAGTCCGTCGCGCTTGTCTCCGATGCCGGTACGCCGCTGATCTCCGATCCCGGCTACAAGCTGGTGCGCGAGGTGT
ACGCTGCCGGACATCAAGTGATCGGACTACCGGGCGCCTCAGCCGTGTTGGTTGCACTGTCGCTCGCAGGGTTGCCGACC
GACCGTTTTTTTTTCGATGGCTTCCTGCCTTCGAAACAGGGAGCGCGCCGCACGCGGCTCGGTGAGCTGGCGGCGATCGA
CGCGACGCTGGTGCTGTTCGAAGCGGGCAGCCGGATTCAGAACTCGGTACATGATCTTGCCGACCTGCTCGGTGCGCCGC
GCGAGGCCGCTATCTGCCGCGAACTGACCAAGCTGCATCAGGAGGTGCGACGCGCCACGCTCGGCGAGCTCGCCGCGCAG
GCCGAAACGATGGAGACGCGCGGCGAATTCGTCGTGGTGATCGCGCCGCCCGATCCCGCCTCGCGGGTGATGAGCGACGA
CGACCTCGACCACTGGCTGAGCGAAGCCCTGACCCGCCTCAGCGTCAAGGACGCGGTCGCACAGGCGGTCGAACTCTCCG
GCCGGCACAAGCGCGAGATCTACGCGCGCGCGTTGGAGCTGTCGCGGCAGCGCGAGGCCGACGATGGCGAAGACTGA

Upstream 100 bases:

>100_bases
AAAGGTTTATGCTCATTACGAGCGCCGGACAAATCACCGTGCCGTCGTTTTTAACCTTTCCTCTGCCATCCTGCCGTCCA
GGCCGATCAAGTTAGTGACG

Downstream 100 bases:

>100_bases
TCGGTCGCACCCCTCCGTGCTGGCGCGCATCGCCGCGTTCCGCACCGGCCTGTCGGCCGAAGCCAGCGCCGCCGATTATC
TCGAACGACAAGGCTACCGG

Product: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MRVKPEISAPPPAAAEPNARTFLVAGQRLVAPRIAPGLHLVATPIGHLGDITLRALETLAGADLIACEDTRITHRLLERY
GISARLKPYHEHNAAQARPKLLEMLAQGQSVALVSDAGTPLISDPGYKLVREVYAAGHQVIGLPGASAVLVALSLAGLPT
DRFFFDGFLPSKQGARRTRLGELAAIDATLVLFEAGSRIQNSVHDLADLLGAPREAAICRELTKLHQEVRRATLGELAAQ
AETMETRGEFVVVIAPPDPASRVMSDDDLDHWLSEALTRLSVKDAVAQAVELSGRHKREIYARALELSRQREADDGED

Sequences:

>Translated_318_residues
MRVKPEISAPPPAAAEPNARTFLVAGQRLVAPRIAPGLHLVATPIGHLGDITLRALETLAGADLIACEDTRITHRLLERY
GISARLKPYHEHNAAQARPKLLEMLAQGQSVALVSDAGTPLISDPGYKLVREVYAAGHQVIGLPGASAVLVALSLAGLPT
DRFFFDGFLPSKQGARRTRLGELAAIDATLVLFEAGSRIQNSVHDLADLLGAPREAAICRELTKLHQEVRRATLGELAAQ
AETMETRGEFVVVIAPPDPASRVMSDDDLDHWLSEALTRLSVKDAVAQAVELSGRHKREIYARALELSRQREADDGED
>Mature_318_residues
MRVKPEISAPPPAAAEPNARTFLVAGQRLVAPRIAPGLHLVATPIGHLGDITLRALETLAGADLIACEDTRITHRLLERY
GISARLKPYHEHNAAQARPKLLEMLAQGQSVALVSDAGTPLISDPGYKLVREVYAAGHQVIGLPGASAVLVALSLAGLPT
DRFFFDGFLPSKQGARRTRLGELAAIDATLVLFEAGSRIQNSVHDLADLLGAPREAAICRELTKLHQEVRRATLGELAAQ
AETMETRGEFVVVIAPPDPASRVMSDDDLDHWLSEALTRLSVKDAVAQAVELSGRHKREIYARALELSRQREADDGED

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=271, Percent_Identity=45.3874538745387, Blast_Score=201, Evalue=6e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 34301; Mature: 34301

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVKPEISAPPPAAAEPNARTFLVAGQRLVAPRIAPGLHLVATPIGHLGDITLRALETLA
CCCCCCCCCCCCCCCCCCCCEEEEECCHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHC
GADLIACEDTRITHRLLERYGISARLKPYHEHNAAQARPKLLEMLAQGQSVALVSDAGTP
CCCEEEECCHHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCC
LISDPGYKLVREVYAAGHQVIGLPGASAVLVALSLAGLPTDRFFFDGFLPSKQGARRTRL
CCCCCHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCHHHHH
GELAAIDATLVLFEAGSRIQNSVHDLADLLGAPREAAICRELTKLHQEVRRATLGELAAQ
HHHHHHHHHHEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AETMETRGEFVVVIAPPDPASRVMSDDDLDHWLSEALTRLSVKDAVAQAVELSGRHKREI
HHHHHCCCCEEEEEECCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
YARALELSRQREADDGED
HHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRVKPEISAPPPAAAEPNARTFLVAGQRLVAPRIAPGLHLVATPIGHLGDITLRALETLA
CCCCCCCCCCCCCCCCCCCCEEEEECCHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHC
GADLIACEDTRITHRLLERYGISARLKPYHEHNAAQARPKLLEMLAQGQSVALVSDAGTP
CCCEEEECCHHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCC
LISDPGYKLVREVYAAGHQVIGLPGASAVLVALSLAGLPTDRFFFDGFLPSKQGARRTRL
CCCCCHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCHHHHH
GELAAIDATLVLFEAGSRIQNSVHDLADLLGAPREAAICRELTKLHQEVRRATLGELAAQ
HHHHHHHHHHEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AETMETRGEFVVVIAPPDPASRVMSDDDLDHWLSEALTRLSVKDAVAQAVELSGRHKREI
HHHHHCCCCEEEEEECCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
YARALELSRQREADDGED
HHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]