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The map label for this gene is yraN [C]

Identifier: 192288756

GI number: 192288756

Start: 345102

End: 345494

Strand: Reverse

Name: yraN [C]

Synonym: Rpal_0325

Alternate gene names: 192288756

Gene position: 345494-345102 (Counterclockwise)

Preceding gene: 192288757

Following gene: 192288755

Centisome position: 6.01

GC content: 68.96

Gene sequence:

>393_bases
ATGGCGAAGACTGATCGGTCGCACCCCTCCGTGCTGGCGCGCATCGCCGCGTTCCGCACCGGCCTGTCGGCCGAAGCCAG
CGCCGCCGATTATCTCGAACGACAAGGCTACCGGATCCTGGCGCGGCGCTTCAAAACCCGCTGCGGCGAGATCGATCTGG
TGGCGCAGCGCGACGCGCTGGTGGTGTTCGTCGAGGTGAAGGCACGCGGCAATGTCGACGATGCCGCCTACGCGGTGACG
CCGCGGCAGCAGGGCCGCATCGTTGCGGCCGCCGAAGCCTGGCTGAGCCGGCATCCCGAACACGCGATGAGCGAGCTGCG
CTTCGACGCCATCCTGATTGCTCCCAACACAGCGCCCCGGCATCTGCCCGGCGCGTTCGACGCCACGCCATGA

Upstream 100 bases:

>100_bases
GTCAAGGACGCGGTCGCACAGGCGGTCGAACTCTCCGGCCGGCACAAGCGCGAGATCTACGCGCGCGCGTTGGAGCTGTC
GCGGCAGCGCGAGGCCGACG

Downstream 100 bases:

>100_bases
GCGCGGCTGCTTGACCAAGCCGCCGCCACCCCGCATCGTCACCGCCGCTCTGCCAACTCCGGAACACACGACATGACATT
GAAGGTCGCCGTCCAGATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 129

Protein sequence:

>130_residues
MAKTDRSHPSVLARIAAFRTGLSAEASAADYLERQGYRILARRFKTRCGEIDLVAQRDALVVFVEVKARGNVDDAAYAVT
PRQQGRIVAAAEAWLSRHPEHAMSELRFDAILIAPNTAPRHLPGAFDATP

Sequences:

>Translated_130_residues
MAKTDRSHPSVLARIAAFRTGLSAEASAADYLERQGYRILARRFKTRCGEIDLVAQRDALVVFVEVKARGNVDDAAYAVT
PRQQGRIVAAAEAWLSRHPEHAMSELRFDAILIAPNTAPRHLPGAFDATP
>Mature_129_residues
AKTDRSHPSVLARIAAFRTGLSAEASAADYLERQGYRILARRFKTRCGEIDLVAQRDALVVFVEVKARGNVDDAAYAVTP
RQQGRIVAAAEAWLSRHPEHAMSELRFDAILIAPNTAPRHLPGAFDATP

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509 [H]

Pfam domain/function: PF02021 UPF0102 [H]

EC number: NA

Molecular weight: Translated: 14267; Mature: 14136

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKTDRSHPSVLARIAAFRTGLSAEASAADYLERQGYRILARRFKTRCGEIDLVAQRDAL
CCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCEE
VVFVEVKARGNVDDAAYAVTPRQQGRIVAAAEAWLSRHPEHAMSELRFDAILIAPNTAPR
EEEEEEECCCCCCCCEEEECCCCCCCEEEHHHHHHHCCHHHHHHHHCCCEEEECCCCCCC
HLPGAFDATP
CCCCCCCCCC
>Mature Secondary Structure 
AKTDRSHPSVLARIAAFRTGLSAEASAADYLERQGYRILARRFKTRCGEIDLVAQRDAL
CCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCEE
VVFVEVKARGNVDDAAYAVTPRQQGRIVAAAEAWLSRHPEHAMSELRFDAILIAPNTAPR
EEEEEEECCCCCCCCEEEECCCCCCCEEEHHHHHHHCCHHHHHHHHCCCEEEECCCCCCC
HLPGAFDATP
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA