Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

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The map label for this gene is 192288704

Identifier: 192288704

GI number: 192288704

Start: 292654

End: 293487

Strand: Reverse

Name: 192288704

Synonym: Rpal_0273

Alternate gene names: NA

Gene position: 293487-292654 (Counterclockwise)

Preceding gene: 192288716

Following gene: 192288702

Centisome position: 5.11

GC content: 66.55

Gene sequence:

>834_bases
ATGCTGCAACGACTCGTGAAAGCGACCAATCAATGGATGCCCACCGCCATGGCGTTCCATTGCTGCCGGATACTCGCATC
GCGCCCGCCGCGGGCCGAGGTCTCCGCGGCGGAGCAGGCCGCCCTGGCACAGGCGAGCCGGCTTTTCGAGCTGGATTGGA
GCAACGACGCCGCCTGGAGCTGGGGCTCCGGTCCAACGGTGGTGCTGATCCATGGTTGGGGTGGGCGCGCCGCCCAGATG
GCGCCCCTCGCGGTCGAGCTCGCGCGATCCGGACTGCGGGCGGTGGCGTTCGATGTCGCAGGGCACGGCGAATCGGCCGA
GCCGTCGGCAGGTTGGGAGTACTCCATTCGCGACATCGCCAAGGTTTCTCGTCAGCTTGGCTCCGTCGCCGGCTATGTTG
GCCACTCGGCCGGCGGGCTGTCGTTGATGGCAGCGCGGCGCATCCATGGCCTGTCACCGGCCAAATACGTCTGTGTTTGC
GCGCCGTCACATCCGTATCCCCCGGTGCGGGGCTTGGCGCAGCGGCTCGATCCGCGGCCCAGTGTGCTGCAGCGGTACCG
AACTTATCTCGGTGCGCAATTCCAGACCGATTGGCGATCGTTAGAAGCAGGCGCAGCGTATCTGGGCGCCGGGGACGATC
TGCTGCTCTGCTACGATCGCAAGGATCGCTTCGTCGATCCTGACGATGGCAACCGCATCCATGCGCTGTGTCCCGGCTCA
CGGCTGCTGACGAGCGACGCCTACGGCCACACCCGCATTCTGCGCGCCACCGAGGTGATGCGCGAGATCGCCAAATTCCT
GAACGACGAGGCCAGTCGTATCGCCGCGGCCTGA

Upstream 100 bases:

>100_bases
TTTCCGTGGCATCTGTCGTTTCTCCTGGCGCGACCTCTCTATGTTGACTGGTCTATTTGGGGACGTCAATCAGCTCTGGA
CACTCATACGGAGGCCCAAG

Downstream 100 bases:

>100_bases
GGTCCGATTGAATGCGCGACCGCCTCGCCCCATTCAGGGTTTGGACGTGTCGCGGCGTTCGCGCACCGAGCCCTCTTGGG
CGACGGAGGCCACCAGGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: Alpha/Beta Fold Superfamily Hydrolase; Alpha/Beta Superfamily Hydrolase/Acyltransferase

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MLQRLVKATNQWMPTAMAFHCCRILASRPPRAEVSAAEQAALAQASRLFELDWSNDAAWSWGSGPTVVLIHGWGGRAAQM
APLAVELARSGLRAVAFDVAGHGESAEPSAGWEYSIRDIAKVSRQLGSVAGYVGHSAGGLSLMAARRIHGLSPAKYVCVC
APSHPYPPVRGLAQRLDPRPSVLQRYRTYLGAQFQTDWRSLEAGAAYLGAGDDLLLCYDRKDRFVDPDDGNRIHALCPGS
RLLTSDAYGHTRILRATEVMREIAKFLNDEASRIAAA

Sequences:

>Translated_277_residues
MLQRLVKATNQWMPTAMAFHCCRILASRPPRAEVSAAEQAALAQASRLFELDWSNDAAWSWGSGPTVVLIHGWGGRAAQM
APLAVELARSGLRAVAFDVAGHGESAEPSAGWEYSIRDIAKVSRQLGSVAGYVGHSAGGLSLMAARRIHGLSPAKYVCVC
APSHPYPPVRGLAQRLDPRPSVLQRYRTYLGAQFQTDWRSLEAGAAYLGAGDDLLLCYDRKDRFVDPDDGNRIHALCPGS
RLLTSDAYGHTRILRATEVMREIAKFLNDEASRIAAA
>Mature_277_residues
MLQRLVKATNQWMPTAMAFHCCRILASRPPRAEVSAAEQAALAQASRLFELDWSNDAAWSWGSGPTVVLIHGWGGRAAQM
APLAVELARSGLRAVAFDVAGHGESAEPSAGWEYSIRDIAKVSRQLGSVAGYVGHSAGGLSLMAARRIHGLSPAKYVCVC
APSHPYPPVRGLAQRLDPRPSVLQRYRTYLGAQFQTDWRSLEAGAAYLGAGDDLLLCYDRKDRFVDPDDGNRIHALCPGS
RLLTSDAYGHTRILRATEVMREIAKFLNDEASRIAAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30070; Mature: 30070

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQRLVKATNQWMPTAMAFHCCRILASRPPRAEVSAAEQAALAQASRLFELDWSNDAAWS
CHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCEE
WGSGPTVVLIHGWGGRAAQMAPLAVELARSGLRAVAFDVAGHGESAEPSAGWEYSIRDIA
CCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHH
KVSRQLGSVAGYVGHSAGGLSLMAARRIHGLSPAKYVCVCAPSHPYPPVRGLAQRLDPRP
HHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCH
SVLQRYRTYLGAQFQTDWRSLEAGAAYLGAGDDLLLCYDRKDRFVDPDDGNRIHALCPGS
HHHHHHHHHHCCCHHHHHHHHHCCCEEECCCCCEEEEECCCCCCCCCCCCCEEEEECCCC
RLLTSDAYGHTRILRATEVMREIAKFLNDEASRIAAA
EEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCC
>Mature Secondary Structure
MLQRLVKATNQWMPTAMAFHCCRILASRPPRAEVSAAEQAALAQASRLFELDWSNDAAWS
CHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCEE
WGSGPTVVLIHGWGGRAAQMAPLAVELARSGLRAVAFDVAGHGESAEPSAGWEYSIRDIA
CCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHH
KVSRQLGSVAGYVGHSAGGLSLMAARRIHGLSPAKYVCVCAPSHPYPPVRGLAQRLDPRP
HHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCH
SVLQRYRTYLGAQFQTDWRSLEAGAAYLGAGDDLLLCYDRKDRFVDPDDGNRIHALCPGS
HHHHHHHHHHCCCHHHHHHHHHCCCEEECCCCCEEEEECCCCCCCCCCCCCEEEEECCCC
RLLTSDAYGHTRILRATEVMREIAKFLNDEASRIAAA
EEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA