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The map label for this gene is 192288648

Identifier: 192288648

GI number: 192288648

Start: 236477

End: 236890

Strand: Reverse

Name: 192288648

Synonym: Rpal_0217

Alternate gene names: NA

Gene position: 236890-236477 (Counterclockwise)

Preceding gene: 192288649

Following gene: 192288647

Centisome position: 4.12

GC content: 60.63

Gene sequence:

>414_bases
ATGAGCAGCGACGCCCACGGCAAGCGCACGCCGACCTCGATGCGCACTCCGATCGGCAAGGTGCGCAAATTCGGCCCCGC
CGGCTCCGGAACCTCGGATTTCTGGCAGCAGCGCATCACCGGCGTCGCCATGGCGCTGCTGATCCTGCCGACCATCGTGG
TGATCATGATGCTGCTCGGCCGCAACCAGGCGGCCGCCGCGCAGATCCTCGGCTCTCCGCTGATCTCGCTGATCATGATC
CTGTTCATCATTGCCTCCGCGATCCACATGAAGATCGGCATGCAGGTGGTGATCGAGGACTACGTCCAGAACGAAAAGCT
CAAGTTGGTCACCATCATGGCCAACAACTTCTTCTCGATCGCCGTGGCGCTGGCCGCGATCTTTGCGATCTTCAAAATGG
CATCCGGAGTTTAA

Upstream 100 bases:

>100_bases
AGACCGCCGACCGCGAGTGGCTGACCTGGGCGGCGCTGATCGGTGGCATCGTGCTGACCGTTCTGCTCTGGGTGATTGCC
TATTCGATGGGGGTGGCCCG

Downstream 100 bases:

>100_bases
GGCATGGCGGCGAACGTCAACGGCGCCCCGGCGGCGGGCGGCTACGCCTATCCGATCGAGGACCACACCTACGACGTCGT
GGTGGTCGGCGCCGGCGGCG

Product: succinate dehydrogenase, hydrophobic membrane anchor protein

Products: fumarate; reduced acceptor

Alternate protein names: Succinate Dehydrogenase Hydrophobic Membrane Anchor; Succinate Dehydrogenase Cytochrome B Subunit; Succinate Dehydrogenase Subunit D; Succinate Dehydrogenase Membrane Anchor Subunit; Succinate Dehydrogenase Cytochrome B Small Subunit; Succinate Dehydrogenase Membrane Anchor Subunit Protein

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MSSDAHGKRTPTSMRTPIGKVRKFGPAGSGTSDFWQQRITGVAMALLILPTIVVIMMLLGRNQAAAAQILGSPLISLIMI
LFIIASAIHMKIGMQVVIEDYVQNEKLKLVTIMANNFFSIAVALAAIFAIFKMASGV

Sequences:

>Translated_137_residues
MSSDAHGKRTPTSMRTPIGKVRKFGPAGSGTSDFWQQRITGVAMALLILPTIVVIMMLLGRNQAAAAQILGSPLISLIMI
LFIIASAIHMKIGMQVVIEDYVQNEKLKLVTIMANNFFSIAVALAAIFAIFKMASGV
>Mature_136_residues
SSDAHGKRTPTSMRTPIGKVRKFGPAGSGTSDFWQQRITGVAMALLILPTIVVIMMLLGRNQAAAAQILGSPLISLIMIL
FIIASAIHMKIGMQVVIEDYVQNEKLKLVTIMANNFFSIAVALAAIFAIFKMASGV

Specific function: Unknown

COG id: COG2142

COG function: function code C; Succinate dehydrogenase, hydrophobic anchor subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.3.99.1

Molecular weight: Translated: 14720; Mature: 14589

Theoretical pI: Translated: 11.16; Mature: 11.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.3 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.6 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSDAHGKRTPTSMRTPIGKVRKFGPAGSGTSDFWQQRITGVAMALLILPTIVVIMMLLG
CCCCCCCCCCCCHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RNQAAAAQILGSPLISLIMILFIIASAIHMKIGMQVVIEDYVQNEKLKLVTIMANNFFSI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHH
AVALAAIFAIFKMASGV
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SSDAHGKRTPTSMRTPIGKVRKFGPAGSGTSDFWQQRITGVAMALLILPTIVVIMMLLG
CCCCCCCCCCCHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RNQAAAAQILGSPLISLIMILFIIASAIHMKIGMQVVIEDYVQNEKLKLVTIMANNFFSI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHH
AVALAAIFAIFKMASGV
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinate; acceptor

Specific reaction: succinate + acceptor = fumarate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA