| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is divL [H]
Identifier: 192288515
GI number: 192288515
Start: 89441
End: 91954
Strand: Reverse
Name: divL [H]
Synonym: Rpal_0082
Alternate gene names: 192288515
Gene position: 91954-89441 (Counterclockwise)
Preceding gene: 192288516
Following gene: 192288514
Centisome position: 1.6
GC content: 66.27
Gene sequence:
>2514_bases ATGTCAGGCGTATTGGGGTCCATACGTCGGACCAGTCTGTCGTGCACCTCCCTGGTGCATGGTTTGGCTGGGACGGCCGT GATGGTCGCGTCGTCGCCGGCGCGAGCCGCGGACGATCACCTGGCCGCCATCACGTCGTCGCTGCTGCTGGATCTCAACC GCCACGAGATGATGACGTTGATCATCGCGCTCGCGGCGCTGGGCTTTTCGGTGATGTCTGCGATCATGCTGGTGCGGACG CGGCAGCGCGCGGTTGCGCGCGAAGCGGGGCTGCGCGCCGACCTGCAGGGGCTGCAGGCGGAGTCTGATCGTTTCCAGGC GCTGCTGTTCGCCGAGCCGCAAGTGCTGATCTCTTGGGCGGCTGGTGACAGCCGGCCGCAGGTCAGCGGCGACACCGCGC TGTTCCTGCCGCTGGAGACGCAGAGTCGCCAACCGCAACGAGTGCTGGCGTTCGGAACCTGGTTGCCGCCCGAGCCGGCG CTGCAAATGGATCACGCAGTCGATGCGCTGCTCGACAAGGGCGAAGGCTTTCTGCTGCAGCTCGTCACCTCGAACGGCCG GTCGATCGAGGCGATGGGGCGCGCCGTCGGCGGGCAGGCTGTCGTCCGCATCCGAGAACTGAGCGGCGTGCGCCGCGAGC TCGCCGACATGACCCGGCGCTTCAAGGCGCTGCAGGAAGAAACCGAGATGCTGCGCGGCTTCGCCACCGCCGCGCCGTGG CCGATCTGGACCCGCCGCTCCGACGGCACACTCAGCTTCGCCAACGCCGCCTATGCGCGGGCGACCGATGCCAGCGACGC CGCGGACGCGATCGGCCGCAATCTCGAACTGCTCGATTCCGGCGATCGCGCCGCGTTGGCACGTGCGCTCGGCGACGGCT ACGAATATTCCGGCCGGCTGCCGATCGTGGTCGGCGGCGAGCGCCGCTACTACGACGTCCGCGCCCTGAAGGTGAGCGGC GGCAGCGCCGGCATCGCAGTCGACGCCACGGAAACGGCCGCGCTCGGCGCCGCACTAGAGCGGATGGCCGATGCGCATCG GCGCACGCTTGATCAGCTTTCTTCCGGCGTTGCGGTGTTCGACGCTCAGCGCCGGCTGTCGTTTTACAACGACTCCTATC GCAAGCTGTGGGACCTCGACCGCATCTTCCTCGATAGCCATCCCGACGATTCCACCGTGCTCGACCGGCTGCGAGCCGAG CGCAAGCTGCCGGAGGAGCGCGACTTCAAGGCGTGGAAGAACAAGCTGCACGAAGCCTATCGGGCGGTCGAGGCCGAGAA GGACGTCTGGTATCTGCCGGACGGCCGCGCCGTCAGCATCGTCACCACGCCCAATCCTGAAGGCGGCGTCACCTATCTGT TTGACGACGTCACCGAGAGTCTCGACCTCAAGCGTCGCTATGGCGGCCTGATCGATGTTCAGCGCGAAACGCTCGACAAT CTGTCGGAAGCCGTTGCGGTGTTCGGCTCCAATGGCTGCGCGCAGTTGTTCAACCCGCCGTTCGCGCGGATGTGGAACCT GTCGGCCGAGGCGCTGCAGAGCCAGCCGCACATCGAGGCGATCGAGGAGTGGTGCCGGCCGTTGTTCGACGACGACGTGT TCTGGCAGGCGCTACGCGGCGCCATCACCGGCATCGACGATCGCCGCCACGTCCTGCTCAAGATCGAGCGCAAGGACGGC AGCGTGCTGGCCTGCAAGACCATGCCGCTGCCCGACGGCGCCACGATGCTGACGTTCCAGGACATCACCGACACCGAGAA CGTCGAGCGGGCGCTGCGCGAGCGCAATGAGGCGCTCGAGACCGCCGATCGCATCAAGATCGATTTCGTCCACCATGTCT CGTATGAGCTGCGGTCGCCACTGACCACCATCATCGGCTTCGCACACTTCCTCAGCGATTCTTCGACCGGGCCGCTCACC GAGAAGCAGGCCGAGTACGTGAACTACATCACGACCTCGACCAACGCGCTGATGGCGATCATCAACAACATCCTCGATCT GGCCAGCATCGACGCCGGGGCGATGACGCTCAATCTCGGCCCGATCGACATCCGCAAGGCGATCGATGCGGCGGCCGAGG GCATTCAGGACCGGCTTGCGCGCGATCAAATCGCGCTGCAGATCGACGTCGATCCGGCGATCGAGAGCTTTGTCGGCGAC GAGCGGCGCGTCGTGCAGGTGCTGTACAATCTGCTCGCCAATGCGATCGATTTCTCGCCCTCGCAGGGGACGGTGCGGCT GACGGTGCGCCGGGGCGAAACCCGGGTGGCGTTCACTGTCACCGATTCTGGTCCCGGCATCGCGCCGGCGTTCAAAGAGA AAATGTTCGATCTGTTCGAGAGCGATCCGCAGGGCTCGCGCCATCGTGGCGCCGGCCTTGGCCTGTCACTGGTGCGTTCG TTCGTCGAGCTGCACGGCGGTAAAGTCCTGGTCGAGTCGGCGGTCGGTCGCGGCACATCGGTGACCTGCGAGTTTCCGAT CGAGCCGGCCGCCCAACGCCACGCGGCCGAATGA
Upstream 100 bases:
>100_bases ACGGTCTGGACTCTTACCCCCCGAGTCGCGATGGCGATAATGTCCTCCGATTCGGCTATGGCGCGGCTTGTCAGTTGCGC CGTGCGGTTTGGGGCAATCG
Downstream 100 bases:
>100_bases GTGCGGTTGCGACATTCTCGGTGGCGCTTGCCAACGAGGTGGCGACCGTGCGGCTGATGGCCGAGGTCGCGCTGCTGATC GGTCCAGGCGATGTCGTGAC
Product: PAS/PAC sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 837; Mature: 836
Protein sequence:
>837_residues MSGVLGSIRRTSLSCTSLVHGLAGTAVMVASSPARAADDHLAAITSSLLLDLNRHEMMTLIIALAALGFSVMSAIMLVRT RQRAVAREAGLRADLQGLQAESDRFQALLFAEPQVLISWAAGDSRPQVSGDTALFLPLETQSRQPQRVLAFGTWLPPEPA LQMDHAVDALLDKGEGFLLQLVTSNGRSIEAMGRAVGGQAVVRIRELSGVRRELADMTRRFKALQEETEMLRGFATAAPW PIWTRRSDGTLSFANAAYARATDASDAADAIGRNLELLDSGDRAALARALGDGYEYSGRLPIVVGGERRYYDVRALKVSG GSAGIAVDATETAALGAALERMADAHRRTLDQLSSGVAVFDAQRRLSFYNDSYRKLWDLDRIFLDSHPDDSTVLDRLRAE RKLPEERDFKAWKNKLHEAYRAVEAEKDVWYLPDGRAVSIVTTPNPEGGVTYLFDDVTESLDLKRRYGGLIDVQRETLDN LSEAVAVFGSNGCAQLFNPPFARMWNLSAEALQSQPHIEAIEEWCRPLFDDDVFWQALRGAITGIDDRRHVLLKIERKDG SVLACKTMPLPDGATMLTFQDITDTENVERALRERNEALETADRIKIDFVHHVSYELRSPLTTIIGFAHFLSDSSTGPLT EKQAEYVNYITTSTNALMAIINNILDLASIDAGAMTLNLGPIDIRKAIDAAAEGIQDRLARDQIALQIDVDPAIESFVGD ERRVVQVLYNLLANAIDFSPSQGTVRLTVRRGETRVAFTVTDSGPGIAPAFKEKMFDLFESDPQGSRHRGAGLGLSLVRS FVELHGGKVLVESAVGRGTSVTCEFPIEPAAQRHAAE
Sequences:
>Translated_837_residues MSGVLGSIRRTSLSCTSLVHGLAGTAVMVASSPARAADDHLAAITSSLLLDLNRHEMMTLIIALAALGFSVMSAIMLVRT RQRAVAREAGLRADLQGLQAESDRFQALLFAEPQVLISWAAGDSRPQVSGDTALFLPLETQSRQPQRVLAFGTWLPPEPA LQMDHAVDALLDKGEGFLLQLVTSNGRSIEAMGRAVGGQAVVRIRELSGVRRELADMTRRFKALQEETEMLRGFATAAPW PIWTRRSDGTLSFANAAYARATDASDAADAIGRNLELLDSGDRAALARALGDGYEYSGRLPIVVGGERRYYDVRALKVSG GSAGIAVDATETAALGAALERMADAHRRTLDQLSSGVAVFDAQRRLSFYNDSYRKLWDLDRIFLDSHPDDSTVLDRLRAE RKLPEERDFKAWKNKLHEAYRAVEAEKDVWYLPDGRAVSIVTTPNPEGGVTYLFDDVTESLDLKRRYGGLIDVQRETLDN LSEAVAVFGSNGCAQLFNPPFARMWNLSAEALQSQPHIEAIEEWCRPLFDDDVFWQALRGAITGIDDRRHVLLKIERKDG SVLACKTMPLPDGATMLTFQDITDTENVERALRERNEALETADRIKIDFVHHVSYELRSPLTTIIGFAHFLSDSSTGPLT EKQAEYVNYITTSTNALMAIINNILDLASIDAGAMTLNLGPIDIRKAIDAAAEGIQDRLARDQIALQIDVDPAIESFVGD ERRVVQVLYNLLANAIDFSPSQGTVRLTVRRGETRVAFTVTDSGPGIAPAFKEKMFDLFESDPQGSRHRGAGLGLSLVRS FVELHGGKVLVESAVGRGTSVTCEFPIEPAAQRHAAE >Mature_836_residues SGVLGSIRRTSLSCTSLVHGLAGTAVMVASSPARAADDHLAAITSSLLLDLNRHEMMTLIIALAALGFSVMSAIMLVRTR QRAVAREAGLRADLQGLQAESDRFQALLFAEPQVLISWAAGDSRPQVSGDTALFLPLETQSRQPQRVLAFGTWLPPEPAL QMDHAVDALLDKGEGFLLQLVTSNGRSIEAMGRAVGGQAVVRIRELSGVRRELADMTRRFKALQEETEMLRGFATAAPWP IWTRRSDGTLSFANAAYARATDASDAADAIGRNLELLDSGDRAALARALGDGYEYSGRLPIVVGGERRYYDVRALKVSGG SAGIAVDATETAALGAALERMADAHRRTLDQLSSGVAVFDAQRRLSFYNDSYRKLWDLDRIFLDSHPDDSTVLDRLRAER KLPEERDFKAWKNKLHEAYRAVEAEKDVWYLPDGRAVSIVTTPNPEGGVTYLFDDVTESLDLKRRYGGLIDVQRETLDNL SEAVAVFGSNGCAQLFNPPFARMWNLSAEALQSQPHIEAIEEWCRPLFDDDVFWQALRGAITGIDDRRHVLLKIERKDGS VLACKTMPLPDGATMLTFQDITDTENVERALRERNEALETADRIKIDFVHHVSYELRSPLTTIIGFAHFLSDSSTGPLTE KQAEYVNYITTSTNALMAIINNILDLASIDAGAMTLNLGPIDIRKAIDAAAEGIQDRLARDQIALQIDVDPAIESFVGDE RRVVQVLYNLLANAIDFSPSQGTVRLTVRRGETRVAFTVTDSGPGIAPAFKEKMFDLFESDPQGSRHRGAGLGLSLVRSF VELHGGKVLVESAVGRGTSVTCEFPIEPAAQRHAAE
Specific function: Required for cell division and growth. It catalyzes the phosphorylation of CtrA and activates transcription in vitro of the cell cycle-regulated fliF promoter [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1788393, Length=238, Percent_Identity=28.5714285714286, Blast_Score=111, Evalue=2e-25, Organism=Escherichia coli, GI1788713, Length=301, Percent_Identity=28.2392026578073, Blast_Score=111, Evalue=2e-25, Organism=Escherichia coli, GI1789149, Length=245, Percent_Identity=29.3877551020408, Blast_Score=108, Evalue=1e-24, Organism=Escherichia coli, GI48994928, Length=244, Percent_Identity=31.9672131147541, Blast_Score=105, Evalue=1e-23, Organism=Escherichia coli, GI145693157, Length=259, Percent_Identity=28.1853281853282, Blast_Score=102, Evalue=1e-22, Organism=Escherichia coli, GI87081816, Length=240, Percent_Identity=31.6666666666667, Blast_Score=96, Evalue=7e-21, Organism=Escherichia coli, GI1790861, Length=256, Percent_Identity=28.125, Blast_Score=93, Evalue=8e-20, Organism=Escherichia coli, GI1786600, Length=270, Percent_Identity=24.8148148148148, Blast_Score=92, Evalue=2e-19, Organism=Escherichia coli, GI1790436, Length=215, Percent_Identity=26.5116279069767, Blast_Score=87, Evalue=4e-18, Organism=Escherichia coli, GI1788549, Length=402, Percent_Identity=22.1393034825871, Blast_Score=86, Evalue=1e-17, Organism=Escherichia coli, GI1786912, Length=245, Percent_Identity=24.8979591836735, Blast_Score=84, Evalue=3e-17, Organism=Escherichia coli, GI87082128, Length=240, Percent_Identity=26.6666666666667, Blast_Score=79, Evalue=9e-16, Organism=Escherichia coli, GI1790300, Length=376, Percent_Identity=23.936170212766, Blast_Score=76, Evalue=1e-14, Organism=Escherichia coli, GI1788279, Length=202, Percent_Identity=26.7326732673267, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1786783, Length=233, Percent_Identity=28.755364806867, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 91661; Mature: 91530
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGVLGSIRRTSLSCTSLVHGLAGTAVMVASSPARAADDHLAAITSSLLLDLNRHEMMTL CCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHH IIALAALGFSVMSAIMLVRTRQRAVAREAGLRADLQGLQAESDRFQALLFAEPQVLISWA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHEEEEEECCEEEEEEE AGDSRPQVSGDTALFLPLETQSRQPQRVLAFGTWLPPEPALQMDHAVDALLDKGEGFLLQ CCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEE LVTSNGRSIEAMGRAVGGQAVVRIRELSGVRRELADMTRRFKALQEETEMLRGFATAAPW EEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PIWTRRSDGTLSFANAAYARATDASDAADAIGRNLELLDSGDRAALARALGDGYEYSGRL CCEECCCCCCEEECCCHHHCCCCCCHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCEE PIVVGGERRYYDVRALKVSGGSAGIAVDATETAALGAALERMADAHRRTLDQLSSGVAVF EEEECCCCEEEEEEEEEECCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE DAQRRLSFYNDSYRKLWDLDRIFLDSHPDDSTVLDRLRAERKLPEERDFKAWKNKLHEAY EHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH RAVEAEKDVWYLPDGRAVSIVTTPNPEGGVTYLFDDVTESLDLKRRYGGLIDVQRETLDN HHHHCCCCEEECCCCCEEEEEECCCCCCCEEEEEHHHHHHHHHHHHHCCEEEEHHHHHHH LSEAVAVFGSNGCAQLFNPPFARMWNLSAEALQSQPHIEAIEEWCRPLFDDDVFWQALRG HHHHHHHHCCCCCHHHCCCCHHHHHCCCHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHH AITGIDDRRHVLLKIERKDGSVLACKTMPLPDGATMLTFQDITDTENVERALRERNEALE HHCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH TADRIKIDFVHHVSYELRSPLTTIIGFAHFLSDSSTGPLTEKQAEYVNYITTSTNALMAI HHHHEEEEEHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHH INNILDLASIDAGAMTLNLGPIDIRKAIDAAAEGIQDRLARDQIALQIDVDPAIESFVGD HHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHCCC ERRVVQVLYNLLANAIDFSPSQGTVRLTVRRGETRVAFTVTDSGPGIAPAFKEKMFDLFE HHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEEEECCCCCCCHHHHHHHHHHHC SDPQGSRHRGAGLGLSLVRSFVELHGGKVLVESAVGRGTSVTCEFPIEPAAQRHAAE CCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEHHCCCCCEEEEECCCCCHHHHCCCC >Mature Secondary Structure SGVLGSIRRTSLSCTSLVHGLAGTAVMVASSPARAADDHLAAITSSLLLDLNRHEMMTL CCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHH IIALAALGFSVMSAIMLVRTRQRAVAREAGLRADLQGLQAESDRFQALLFAEPQVLISWA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHEEEEEECCEEEEEEE AGDSRPQVSGDTALFLPLETQSRQPQRVLAFGTWLPPEPALQMDHAVDALLDKGEGFLLQ CCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEE LVTSNGRSIEAMGRAVGGQAVVRIRELSGVRRELADMTRRFKALQEETEMLRGFATAAPW EEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PIWTRRSDGTLSFANAAYARATDASDAADAIGRNLELLDSGDRAALARALGDGYEYSGRL CCEECCCCCCEEECCCHHHCCCCCCHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCEE PIVVGGERRYYDVRALKVSGGSAGIAVDATETAALGAALERMADAHRRTLDQLSSGVAVF EEEECCCCEEEEEEEEEECCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE DAQRRLSFYNDSYRKLWDLDRIFLDSHPDDSTVLDRLRAERKLPEERDFKAWKNKLHEAY EHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH RAVEAEKDVWYLPDGRAVSIVTTPNPEGGVTYLFDDVTESLDLKRRYGGLIDVQRETLDN HHHHCCCCEEECCCCCEEEEEECCCCCCCEEEEEHHHHHHHHHHHHHCCEEEEHHHHHHH LSEAVAVFGSNGCAQLFNPPFARMWNLSAEALQSQPHIEAIEEWCRPLFDDDVFWQALRG HHHHHHHHCCCCCHHHCCCCHHHHHCCCHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHH AITGIDDRRHVLLKIERKDGSVLACKTMPLPDGATMLTFQDITDTENVERALRERNEALE HHCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH TADRIKIDFVHHVSYELRSPLTTIIGFAHFLSDSSTGPLTEKQAEYVNYITTSTNALMAI HHHHEEEEEHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHH INNILDLASIDAGAMTLNLGPIDIRKAIDAAAEGIQDRLARDQIALQIDVDPAIESFVGD HHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHCCC ERRVVQVLYNLLANAIDFSPSQGTVRLTVRRGETRVAFTVTDSGPGIAPAFKEKMFDLFE HHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEEEECCCCCCCHHHHHHHHHHHC SDPQGSRHRGAGLGLSLVRSFVELHGGKVLVESAVGRGTSVTCEFPIEPAAQRHAAE CCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEHHCCCCCEEEEECCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10557274; 11259647 [H]