| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is yjeE [C]
Identifier: 192288514
GI number: 192288514
Start: 87924
End: 89444
Strand: Reverse
Name: yjeE [C]
Synonym: Rpal_0081
Alternate gene names: 192288514
Gene position: 89444-87924 (Counterclockwise)
Preceding gene: 192288515
Following gene: 192288513
Centisome position: 1.56
GC content: 68.11
Gene sequence:
>1521_bases ATGAGTGCGGTTGCGACATTCTCGGTGGCGCTTGCCAACGAGGTGGCGACCGTGCGGCTGATGGCCGAGGTCGCGCTGCT GATCGGTCCAGGCGATGTCGTGACCTTGTCGGGCGATCTCGGCGCCGGCAAGACAGCCGCGGCGCGGGCGATGATCCGTT ATCTTGCGGACGATGACGCGCTCGAAGTGCCGAGCCCGACCTTCACGCTGGTGCAGACCTACGATCTGCCGCCTTATCCG CTGCTGCATGCGGATCTGTATCGGGTCGAGGATCCGTCCGAGCTGGAAGAGATCGGGCTGTCGCCGCTGCCGGACGGCAC CGTGGCGCTGATCGAATGGCCCGAGCGCGCTGGGGCGGCGCTGCCGGAAGATCGCATCGACATCGCGCTCAGTCATCGTC CGGCGCTCGGCCCGTCGGCGCGCGCGGCGGAAATCACCGGTCACGGCAAAGCCGTGAAGCAGGTCGAACGGCTCGCCGCG CTGCGCAGCTTCATCGAGACCGCCGGTTATGCCGATGCCGAGCGCCGGCACATGCCGGGTGACGCGTCGACGCGTTCCTA CGCGCGGCTGCAGCGCGGCGCCGAAAGCGTAATCCTGATGAACGCGCCGCGCCGCCCGGACGGTCCGGCGCTCTATGCCG GCAAGAGCTACAGCGCCGCGGTGCATCTGGCAGAAGATGTCCGGCCCTTCGTTGCGATCGGGCAGGGCCTGCGCGAACGC GGCTTCTCGGCGCCCGCGATCCATCACGCCGATCTGGACGCCGGCTTCCTGATCACCGAAGATCTCGGCCGCATCGGCTT TGTCGAGGGCGATCCGCCGGCGCCGGTGGTGGCGCGTTATCAGGCCGCCACCGACATGCTGGCGGCGCTGCACGCTAAGC CGCTGCCGGATCATCTGCCGCTGTCGACGCGCGAGAGCTACGCCGTGCCGACGTTCGACGAAGCCGCGATGATGATCGAG GTCGGCCTGATGCCCGAGTGGTATCTGCCGGATCGCGGCGCGCCGCCGTCGGAAGCATTGCGGGCCGAATTCGTAGCGCT GTGGCGCAAGCTGCTCGCCGGCATCGCGACCGCGCCGCGGACCTGGGTGCTGCGCGACTATCACTCGCCGAATTTGATCT GGTTGGAGGACCGTCCCGGCATCGAGCGCGTCGGGGTCATCGACTTCCAGGACACTGTGCTGGGCCCGGCCGCCTATGAT GTGGTGTCGCTGCTGCAGGACGCTCGCATCGACGTGCCGGAAGCGACAGAATTGTCGCTGCTCGGCCGCTACGTCAAAGC CCGGCTCGCTGCCGATCCCGAGTTCGACGCCCCTGGGTTCGCGCGGCTCTACGCCGTGATGTCGGCGCAGCGGAACACGC GGCTATTGGGAACTTTTGCTCGGCTCAACCGGCGCGACGGCAAGCCGCAATATTTGAAACATCAGCCGCGGGTGTGGGCC TATCTGGCCCGCTCGCTGGCGCATCCGGCGCTCGCCGAGGTCCGCGCCTGGTATCGGGACCACGTGCCACCACCGCTCTG A
Upstream 100 bases:
>100_bases TGCACGGCGGTAAAGTCCTGGTCGAGTCGGCGGTCGGTCGCGGCACATCGGTGACCTGCGAGTTTCCGATCGAGCCGGCC GCCCAACGCCACGCGGCCGA
Downstream 100 bases:
>100_bases TTCGGCGGATTTCCTTTACGCATCTTTAGAGTCGGCCTCGTAGTGTTGCGGGGTCGCCGCGGCATGGCCCGGCGGCGCCA AGACCGAACTGCAGGACTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 506; Mature: 505
Protein sequence:
>506_residues MSAVATFSVALANEVATVRLMAEVALLIGPGDVVTLSGDLGAGKTAAARAMIRYLADDDALEVPSPTFTLVQTYDLPPYP LLHADLYRVEDPSELEEIGLSPLPDGTVALIEWPERAGAALPEDRIDIALSHRPALGPSARAAEITGHGKAVKQVERLAA LRSFIETAGYADAERRHMPGDASTRSYARLQRGAESVILMNAPRRPDGPALYAGKSYSAAVHLAEDVRPFVAIGQGLRER GFSAPAIHHADLDAGFLITEDLGRIGFVEGDPPAPVVARYQAATDMLAALHAKPLPDHLPLSTRESYAVPTFDEAAMMIE VGLMPEWYLPDRGAPPSEALRAEFVALWRKLLAGIATAPRTWVLRDYHSPNLIWLEDRPGIERVGVIDFQDTVLGPAAYD VVSLLQDARIDVPEATELSLLGRYVKARLAADPEFDAPGFARLYAVMSAQRNTRLLGTFARLNRRDGKPQYLKHQPRVWA YLARSLAHPALAEVRAWYRDHVPPPL
Sequences:
>Translated_506_residues MSAVATFSVALANEVATVRLMAEVALLIGPGDVVTLSGDLGAGKTAAARAMIRYLADDDALEVPSPTFTLVQTYDLPPYP LLHADLYRVEDPSELEEIGLSPLPDGTVALIEWPERAGAALPEDRIDIALSHRPALGPSARAAEITGHGKAVKQVERLAA LRSFIETAGYADAERRHMPGDASTRSYARLQRGAESVILMNAPRRPDGPALYAGKSYSAAVHLAEDVRPFVAIGQGLRER GFSAPAIHHADLDAGFLITEDLGRIGFVEGDPPAPVVARYQAATDMLAALHAKPLPDHLPLSTRESYAVPTFDEAAMMIE VGLMPEWYLPDRGAPPSEALRAEFVALWRKLLAGIATAPRTWVLRDYHSPNLIWLEDRPGIERVGVIDFQDTVLGPAAYD VVSLLQDARIDVPEATELSLLGRYVKARLAADPEFDAPGFARLYAVMSAQRNTRLLGTFARLNRRDGKPQYLKHQPRVWA YLARSLAHPALAEVRAWYRDHVPPPL >Mature_505_residues SAVATFSVALANEVATVRLMAEVALLIGPGDVVTLSGDLGAGKTAAARAMIRYLADDDALEVPSPTFTLVQTYDLPPYPL LHADLYRVEDPSELEEIGLSPLPDGTVALIEWPERAGAALPEDRIDIALSHRPALGPSARAAEITGHGKAVKQVERLAAL RSFIETAGYADAERRHMPGDASTRSYARLQRGAESVILMNAPRRPDGPALYAGKSYSAAVHLAEDVRPFVAIGQGLRERG FSAPAIHHADLDAGFLITEDLGRIGFVEGDPPAPVVARYQAATDMLAALHAKPLPDHLPLSTRESYAVPTFDEAAMMIEV GLMPEWYLPDRGAPPSEALRAEFVALWRKLLAGIATAPRTWVLRDYHSPNLIWLEDRPGIERVGVIDFQDTVLGPAAYDV VSLLQDARIDVPEATELSLLGRYVKARLAADPEFDAPGFARLYAVMSAQRNTRLLGTFARLNRRDGKPQYLKHQPRVWAY LARSLAHPALAEVRAWYRDHVPPPL
Specific function: Unknown
COG id: COG3178
COG function: function code R; Predicted phosphotransferase related to Ser/Thr protein kinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0079 family [H]
Homologues:
Organism=Escherichia coli, GI1790610, Length=143, Percent_Identity=35.6643356643357, Blast_Score=85, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003442 [H]
Pfam domain/function: PF02367 UPF0079 [H]
EC number: NA
Molecular weight: Translated: 55113; Mature: 54982
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVATFSVALANEVATVRLMAEVALLIGPGDVVTLSGDLGAGKTAAARAMIRYLADDDA CCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCC LEVPSPTFTLVQTYDLPPYPLLHADLYRVEDPSELEEIGLSPLPDGTVALIEWPERAGAA CCCCCCCEEEEEECCCCCCCCHHHHHHCCCCHHHHHHCCCCCCCCCCEEEEECCHHCCCC LPEDRIDIALSHRPALGPSARAAEITGHGKAVKQVERLAALRSFIETAGYADAERRHMPG CCCCCEEEEECCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCC DASTRSYARLQRGAESVILMNAPRRPDGPALYAGKSYSAAVHLAEDVRPFVAIGQGLRER CCCHHHHHHHHCCCCEEEEEECCCCCCCCEEECCCCCHHEEHHHHHHHHHHHHHHHHHHC GFSAPAIHHADLDAGFLITEDLGRIGFVEGDPPAPVVARYQAATDMLAALHAKPLPDHLP CCCCCCEEECCCCCCEEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC LSTRESYAVPTFDEAAMMIEVGLMPEWYLPDRGAPPSEALRAEFVALWRKLLAGIATAPR CCCCCCCCCCCHHCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC TWVLRDYHSPNLIWLEDRPGIERVGVIDFQDTVLGPAAYDVVSLLQDARIDVPEATELSL EEEEEECCCCCEEEECCCCCCCEEEEEECHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHH LGRYVKARLAADPEFDAPGFARLYAVMSAQRNTRLLGTFARLNRRDGKPQYLKHQPRVWA HHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHCCCHHHH YLARSLAHPALAEVRAWYRDHVPPPL HHHHHHCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SAVATFSVALANEVATVRLMAEVALLIGPGDVVTLSGDLGAGKTAAARAMIRYLADDDA CCHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCC LEVPSPTFTLVQTYDLPPYPLLHADLYRVEDPSELEEIGLSPLPDGTVALIEWPERAGAA CCCCCCCEEEEEECCCCCCCCHHHHHHCCCCHHHHHHCCCCCCCCCCEEEEECCHHCCCC LPEDRIDIALSHRPALGPSARAAEITGHGKAVKQVERLAALRSFIETAGYADAERRHMPG CCCCCEEEEECCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCC DASTRSYARLQRGAESVILMNAPRRPDGPALYAGKSYSAAVHLAEDVRPFVAIGQGLRER CCCHHHHHHHHCCCCEEEEEECCCCCCCCEEECCCCCHHEEHHHHHHHHHHHHHHHHHHC GFSAPAIHHADLDAGFLITEDLGRIGFVEGDPPAPVVARYQAATDMLAALHAKPLPDHLP CCCCCCEEECCCCCCEEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC LSTRESYAVPTFDEAAMMIEVGLMPEWYLPDRGAPPSEALRAEFVALWRKLLAGIATAPR CCCCCCCCCCCHHCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC TWVLRDYHSPNLIWLEDRPGIERVGVIDFQDTVLGPAAYDVVSLLQDARIDVPEATELSL EEEEEECCCCCEEEECCCCCCCEEEEEECHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHH LGRYVKARLAADPEFDAPGFARLYAVMSAQRNTRLLGTFARLNRRDGKPQYLKHQPRVWA HHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHCCCHHHH YLARSLAHPALAEVRAWYRDHVPPPL HHHHHHCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]