Definition Rhizobium etli CIAT 652 plasmid pC, complete sequence.
Accession NC_010997
Length 1,091,523

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The map label for this gene is 190894828

Identifier: 190894828

GI number: 190894828

Start: 535068

End: 537590

Strand: Reverse

Name: 190894828

Synonym: RHECIAT_PC0000493

Alternate gene names: NA

Gene position: 537590-535068 (Counterclockwise)

Preceding gene: 190894832

Following gene: 190894827

Centisome position: 49.25

GC content: 65.76

Gene sequence:

>2523_bases
GTGAAAACGGAAAGCATCAAGCAGCCGGACGACACGGCGCCAGCGTACGGCGTGGCCGAGGGGCAGACGATCACGGCATG
GGCCGTTTCGGCCCTCATCGAGCGCTATTTTCCCGGCGAGCCGGCTCCGGCCGAAGATCGCGTCAACTACCGCTTCATCA
ACGGTTTCGTCGATGTCGGCGACCTGCCGTGCCGCAAGGCCTTCTGGTCCACCATGGTCGGGCGGGCGCTGGAGCCGGAC
ACGTGCTGGCCGACTGAAAGCCTCTATCTTCCCGGTTCAAACCGCCGCGTGGAGTTTACCAGTTTCTGGCATGTGCCCAC
CCATGTCAGGCGATGGCTGAGGGGCACGTTCAGGACGGATGCCCCGCGCAGGCTCAATCTCGCGCTCAAGACCTGCGGCG
GCGTCCGCATCTGGGTCAACGGCCAGGAGGCGTCCCGCTTCGAGCCCTTCAGGCGCAACGTCGAGAGCGCAACCGAGATC
GCGCTGACGCTCGAGGCCGGCGACAACGAGGTTCTCGTCCATACCGAAGACCTTGCCGAGCGCGACACGACCTGGTTCTT
CGAGCTCGAAATGCTGGACAAGGAGCCGCTCTCGGTGCTGCTGCCGGTAGCGCTGGACCAGAACGAGGTGCGCGAACTGG
AAGTTCTGTCGCGCGGCGTGCGCCCGGCCCGAGACGTCTTCGTCAATCAACCGCTAGAGATCGTCTTCGATACCGCGCCC
GCGCGCGATCTGCCCGTGGAGCTCAAAGTCGTCGGCCATGGCCACGAGCGGCCGGTTCTCGCCCATTCGAAGCTGACGTT
GCGCGCCCGACAGAGCCGCCTGATCGCCGAGGAAGTCTGCGGCATTGCGGACGGTTATCACGGCGTCCACATGACGATCG
GCTCCGGGCCGGGTTCGGTCACCCGCGTCATCGATGCCGCCTTCATGAGTAGCCTTTCGCCGTTGCCGGTGGAGACGTCG
CTTTCTGCCCGCAAGGGCCAGGCGCTGGAATACAGCGCCCGCTTTGGCGCCAATCGCGCCGGGCGCCTCATCGCGATGAT
GGAAACCGGCCATCACGACCCGAAAAGCTTCGATCGTATCGTTGACGCGACGCTTGCCTCGATCGATGCGCGCGAGGATT
GCTCGGACTTCATCATGGTGCCGCTCCTCTGGCTGCTCGGCGCCTATGGCGACCGGATGCCCGAGGCCATCGTCGAACGC
ATCCGCCGTTCCGTTCTCTCTTATCGCTACTGGGTCGACGAGCCGGGCAATGACGCGATGTGGTTCTGGAGCGAGAACCA
TGTGCTCTGCTTCCATACCAGCCAGCTGCTGGCCGGGCTTCTTCTGCCCGACGCGGTGTTCTCGGCCTCCGGGCGGACGG
GACGACAGCAGGCGGAACTCGCCGTCGAGCGGCTCGGCCGCTGGTTCGACAGCGTCGAGGCCCACGGCCTGGCGGAATGG
AATTCGGCCGCCTATTACCCGATCGATTTCATCGGTCTGCTCGCGCTGGAGCGATGGGCGGAGCGCGGGATCGCCGATCG
CGCCCGCGGCCAGATCGATCTCATCTTCCGCATGATCGCCCTTCACACGCTTGCCGGCGTACCGGCCGGCTCGCAGGGCC
GCGCCTACGACAAGGAGCTGCGCGCCGGACCGCTGACCGAGCTTGCACCCTTTGCCCAGGTCGCCTTTGGCACCGGCTGG
CTCAACAACGGCGTGGCGGCGCTGACGATGTTCTGTGCCGGCAGCTATGAGCCGCCCGCCGATCTGACCGAGCTTGCCGC
CCTTCCCAGGGGCAGAAGCGTCGAGGCGCGTTACAGCCAGGGGCTCGAGAGCGGAAAGCTCGTGCTGTTCAAGAACGAGG
CGGCGCAGCTTTCGACGGTGGTCGATCACAAGACCGGCCGGAAGGGTCACCAGCAGCACGTGCTCGACATCAGGCTGGCC
GGCCATCCGATGGCGCGACTCTGGGTCAACCATCCCGGCGAGGACGATCCCTGGGGCAATCAACGGCCGTCCTATTGGGC
CGGCAACGGCATCCTGCCGCGTGTCGCCCAGCATCGCGATGTCGCCCTGCTGATCGAGGACACAAGCGACGCGCGGCATG
CGTGGACGCATGCCTATATCGGCCGCGATGGCCTCGACGATCTCATCGTCGAAGACAAGTGGCTGATCGCCCGATCGGGC
AGGGGCTTTGCCGCCCTCTGGGCCTCAAACGGCCTGGAATTGATCACCGAAGGGCCGACCGCCGGCCGCGAGGCGCGCTC
CTACGGGTCGCTCTGCGGCTGGGCAGCTATCGTGGGAAGCGGGAATAGCGATGCCTTCAAGGCCTTCCTCGAACGTTTAC
GCCAGACAAAGGTTGCCTTCGATCCCGCGCTTCGGCAGCTCGTCCTGACTCCGCCGGGCGGTCCGGCGCTCTCCCTTTCT
TATGCCGATGGTCTTTCGATAGCCGGCAAGCCACGGCCGTTCACCCATGATCAGCCGCACCCGATCCTCACCCACGACAG
CGCGGCCTCCGGCTCAGCCGCTGACGGGCCGTTTTACTCCTGA

Upstream 100 bases:

>100_bases
TTTTCTACACGAATAGCGATGTTTTTGAGCGATTTTCAAAAATCACGCACCCAAATAGCCTAATGAAAATATTTTCATAG
GATTGCGGAGGAGGCGATCT

Downstream 100 bases:

>100_bases
GAATATAGGATTTCAGCATGAACACAGCATCTGTCGACAACGGCGCTCTCCTGACGACCATCGATCGCGTGGCGACGGCC
TTCAGCCGCCTCAGGGGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 840; Mature: 840

Protein sequence:

>840_residues
MKTESIKQPDDTAPAYGVAEGQTITAWAVSALIERYFPGEPAPAEDRVNYRFINGFVDVGDLPCRKAFWSTMVGRALEPD
TCWPTESLYLPGSNRRVEFTSFWHVPTHVRRWLRGTFRTDAPRRLNLALKTCGGVRIWVNGQEASRFEPFRRNVESATEI
ALTLEAGDNEVLVHTEDLAERDTTWFFELEMLDKEPLSVLLPVALDQNEVRELEVLSRGVRPARDVFVNQPLEIVFDTAP
ARDLPVELKVVGHGHERPVLAHSKLTLRARQSRLIAEEVCGIADGYHGVHMTIGSGPGSVTRVIDAAFMSSLSPLPVETS
LSARKGQALEYSARFGANRAGRLIAMMETGHHDPKSFDRIVDATLASIDAREDCSDFIMVPLLWLLGAYGDRMPEAIVER
IRRSVLSYRYWVDEPGNDAMWFWSENHVLCFHTSQLLAGLLLPDAVFSASGRTGRQQAELAVERLGRWFDSVEAHGLAEW
NSAAYYPIDFIGLLALERWAERGIADRARGQIDLIFRMIALHTLAGVPAGSQGRAYDKELRAGPLTELAPFAQVAFGTGW
LNNGVAALTMFCAGSYEPPADLTELAALPRGRSVEARYSQGLESGKLVLFKNEAAQLSTVVDHKTGRKGHQQHVLDIRLA
GHPMARLWVNHPGEDDPWGNQRPSYWAGNGILPRVAQHRDVALLIEDTSDARHAWTHAYIGRDGLDDLIVEDKWLIARSG
RGFAALWASNGLELITEGPTAGREARSYGSLCGWAAIVGSGNSDAFKAFLERLRQTKVAFDPALRQLVLTPPGGPALSLS
YADGLSIAGKPRPFTHDQPHPILTHDSAASGSAADGPFYS

Sequences:

>Translated_840_residues
MKTESIKQPDDTAPAYGVAEGQTITAWAVSALIERYFPGEPAPAEDRVNYRFINGFVDVGDLPCRKAFWSTMVGRALEPD
TCWPTESLYLPGSNRRVEFTSFWHVPTHVRRWLRGTFRTDAPRRLNLALKTCGGVRIWVNGQEASRFEPFRRNVESATEI
ALTLEAGDNEVLVHTEDLAERDTTWFFELEMLDKEPLSVLLPVALDQNEVRELEVLSRGVRPARDVFVNQPLEIVFDTAP
ARDLPVELKVVGHGHERPVLAHSKLTLRARQSRLIAEEVCGIADGYHGVHMTIGSGPGSVTRVIDAAFMSSLSPLPVETS
LSARKGQALEYSARFGANRAGRLIAMMETGHHDPKSFDRIVDATLASIDAREDCSDFIMVPLLWLLGAYGDRMPEAIVER
IRRSVLSYRYWVDEPGNDAMWFWSENHVLCFHTSQLLAGLLLPDAVFSASGRTGRQQAELAVERLGRWFDSVEAHGLAEW
NSAAYYPIDFIGLLALERWAERGIADRARGQIDLIFRMIALHTLAGVPAGSQGRAYDKELRAGPLTELAPFAQVAFGTGW
LNNGVAALTMFCAGSYEPPADLTELAALPRGRSVEARYSQGLESGKLVLFKNEAAQLSTVVDHKTGRKGHQQHVLDIRLA
GHPMARLWVNHPGEDDPWGNQRPSYWAGNGILPRVAQHRDVALLIEDTSDARHAWTHAYIGRDGLDDLIVEDKWLIARSG
RGFAALWASNGLELITEGPTAGREARSYGSLCGWAAIVGSGNSDAFKAFLERLRQTKVAFDPALRQLVLTPPGGPALSLS
YADGLSIAGKPRPFTHDQPHPILTHDSAASGSAADGPFYS
>Mature_840_residues
MKTESIKQPDDTAPAYGVAEGQTITAWAVSALIERYFPGEPAPAEDRVNYRFINGFVDVGDLPCRKAFWSTMVGRALEPD
TCWPTESLYLPGSNRRVEFTSFWHVPTHVRRWLRGTFRTDAPRRLNLALKTCGGVRIWVNGQEASRFEPFRRNVESATEI
ALTLEAGDNEVLVHTEDLAERDTTWFFELEMLDKEPLSVLLPVALDQNEVRELEVLSRGVRPARDVFVNQPLEIVFDTAP
ARDLPVELKVVGHGHERPVLAHSKLTLRARQSRLIAEEVCGIADGYHGVHMTIGSGPGSVTRVIDAAFMSSLSPLPVETS
LSARKGQALEYSARFGANRAGRLIAMMETGHHDPKSFDRIVDATLASIDAREDCSDFIMVPLLWLLGAYGDRMPEAIVER
IRRSVLSYRYWVDEPGNDAMWFWSENHVLCFHTSQLLAGLLLPDAVFSASGRTGRQQAELAVERLGRWFDSVEAHGLAEW
NSAAYYPIDFIGLLALERWAERGIADRARGQIDLIFRMIALHTLAGVPAGSQGRAYDKELRAGPLTELAPFAQVAFGTGW
LNNGVAALTMFCAGSYEPPADLTELAALPRGRSVEARYSQGLESGKLVLFKNEAAQLSTVVDHKTGRKGHQQHVLDIRLA
GHPMARLWVNHPGEDDPWGNQRPSYWAGNGILPRVAQHRDVALLIEDTSDARHAWTHAYIGRDGLDDLIVEDKWLIARSG
RGFAALWASNGLELITEGPTAGREARSYGSLCGWAAIVGSGNSDAFKAFLERLRQTKVAFDPALRQLVLTPPGGPALSLS
YADGLSIAGKPRPFTHDQPHPILTHDSAASGSAADGPFYS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 92638; Mature: 92638

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTESIKQPDDTAPAYGVAEGQTITAWAVSALIERYFPGEPAPAEDRVNYRFINGFVDVG
CCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECEEECC
DLPCRKAFWSTMVGRALEPDTCWPTESLYLPGSNRRVEFTSFWHVPTHVRRWLRGTFRTD
CCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCEEEEEEEECCHHHHHHHHHHHCCCC
APRRLNLALKTCGGVRIWVNGQEASRFEPFRRNVESATEIALTLEAGDNEVLVHTEDLAE
CCCEEEEEEECCCCEEEEECCCCCCCCCHHHHCHHCCEEEEEEEECCCCEEEEEEHHHHC
RDTTWFFELEMLDKEPLSVLLPVALDQNEVRELEVLSRGVRPARDVFVNQPLEIVFDTAP
CCCEEEEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEECCC
ARDLPVELKVVGHGHERPVLAHSKLTLRARQSRLIAEEVCGIADGYHGVHMTIGSGPGSV
CCCCCEEEEEEECCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHH
TRVIDAAFMSSLSPLPVETSLSARKGQALEYSARFGANRAGRLIAMMETGHHDPKSFDRI
HHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEHHHCCCCCCCCEEEEEECCCCCHHHHHHH
VDATLASIDAREDCSDFIMVPLLWLLGAYGDRMPEAIVERIRRSVLSYRYWVDEPGNDAM
HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEEECCCCCCEE
WFWSENHVLCFHTSQLLAGLLLPDAVFSASGRTGRQQAELAVERLGRWFDSVEAHGLAEW
EEEECCCEEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
NSAAYYPIDFIGLLALERWAERGIADRARGQIDLIFRMIALHTLAGVPAGSQGRAYDKEL
CCCCCCHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
RAGPLTELAPFAQVAFGTGWLNNGVAALTMFCAGSYEPPADLTELAALPRGRSVEARYSQ
CCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCHHHHC
GLESGKLVLFKNEAAQLSTVVDHKTGRKGHQQHVLDIRLAGHPMARLWVNHPGEDDPWGN
CCCCCCEEEEECCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCC
QRPSYWAGNGILPRVAQHRDVALLIEDTSDARHAWTHAYIGRDGLDDLIVEDKWLIARSG
CCCCCCCCCCCCHHHHCCCCEEEEEECCCCCHHHHHHHHCCCCCCHHHHCCCCEEEEECC
RGFAALWASNGLELITEGPTAGREARSYGSLCGWAAIVGSGNSDAFKAFLERLRQTKVAF
CCEEEEEECCCCEEEECCCCCCHHHHHHCCHHHEHHEECCCCCHHHHHHHHHHHHHHHHH
DPALRQLVLTPPGGPALSLSYADGLSIAGKPRPFTHDQPHPILTHDSAASGSAADGPFYS
CHHHHEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKTESIKQPDDTAPAYGVAEGQTITAWAVSALIERYFPGEPAPAEDRVNYRFINGFVDVG
CCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECEEECC
DLPCRKAFWSTMVGRALEPDTCWPTESLYLPGSNRRVEFTSFWHVPTHVRRWLRGTFRTD
CCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCEEEEEEEECCHHHHHHHHHHHCCCC
APRRLNLALKTCGGVRIWVNGQEASRFEPFRRNVESATEIALTLEAGDNEVLVHTEDLAE
CCCEEEEEEECCCCEEEEECCCCCCCCCHHHHCHHCCEEEEEEEECCCCEEEEEEHHHHC
RDTTWFFELEMLDKEPLSVLLPVALDQNEVRELEVLSRGVRPARDVFVNQPLEIVFDTAP
CCCEEEEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEECCC
ARDLPVELKVVGHGHERPVLAHSKLTLRARQSRLIAEEVCGIADGYHGVHMTIGSGPGSV
CCCCCEEEEEEECCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHH
TRVIDAAFMSSLSPLPVETSLSARKGQALEYSARFGANRAGRLIAMMETGHHDPKSFDRI
HHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEHHHCCCCCCCCEEEEEECCCCCHHHHHHH
VDATLASIDAREDCSDFIMVPLLWLLGAYGDRMPEAIVERIRRSVLSYRYWVDEPGNDAM
HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEEECCCCCCEE
WFWSENHVLCFHTSQLLAGLLLPDAVFSASGRTGRQQAELAVERLGRWFDSVEAHGLAEW
EEEECCCEEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
NSAAYYPIDFIGLLALERWAERGIADRARGQIDLIFRMIALHTLAGVPAGSQGRAYDKEL
CCCCCCHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
RAGPLTELAPFAQVAFGTGWLNNGVAALTMFCAGSYEPPADLTELAALPRGRSVEARYSQ
CCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCHHHHC
GLESGKLVLFKNEAAQLSTVVDHKTGRKGHQQHVLDIRLAGHPMARLWVNHPGEDDPWGN
CCCCCCEEEEECCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCC
QRPSYWAGNGILPRVAQHRDVALLIEDTSDARHAWTHAYIGRDGLDDLIVEDKWLIARSG
CCCCCCCCCCCCHHHHCCCCEEEEEECCCCCHHHHHHHHCCCCCCHHHHCCCCEEEEECC
RGFAALWASNGLELITEGPTAGREARSYGSLCGWAAIVGSGNSDAFKAFLERLRQTKVAF
CCEEEEEECCCCEEEECCCCCCHHHHHHCCHHHEHHEECCCCCHHHHHHHHHHHHHHHHH
DPALRQLVLTPPGGPALSLSYADGLSIAGKPRPFTHDQPHPILTHDSAASGSAADGPFYS
CHHHHEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA