Definition Rhizobium etli CIAT 652 plasmid pC, complete sequence.
Accession NC_010997
Length 1,091,523

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The map label for this gene is 190894745

Identifier: 190894745

GI number: 190894745

Start: 436123

End: 436875

Strand: Reverse

Name: 190894745

Synonym: RHECIAT_PC0000410

Alternate gene names: NA

Gene position: 436875-436123 (Counterclockwise)

Preceding gene: 190894753

Following gene: 190894744

Centisome position: 40.02

GC content: 61.09

Gene sequence:

>753_bases
ATGAAGATCATGGTAGCGGGAGCAAGCGGCATTGTCGGAACGCAACTCACGGCGAAGCTGCGCCGGGCGGGCCACGATGT
GACGGCCGCATCGTTATCGCTTGGCGTCGATACGGTGACGGGCAGGGGCCTCGAAGCGGCGATGGCGGGAAACGAAATCG
TCATCGATGTCACCAATGCCGCATCATTCGGCGATAGTTCGGCATTCGATTTCTTCAGAACATCGACGAAGAATCTGCTC
GCCGCTGCGGCCGGAGCCAATGTCAGGCACTATCTCGCGCTCTCGGTCGTCGGCACGCCCTGCCTCGTCGAAAGCGATTA
TTTTCGCGCGAAACTGGTGCAGGAAAATCTCATCCGTGCTTCCGGCCGAGGCTACACGCTCCTCCGCTCGACGCAATTTT
ACGAGTTCATCAACGGCTTGATCGAAATCGGTGCCGAAGGCGACGTCCTTCGCTTGCCCCCCGCGGCAATGCGGCCGGTC
GCCGCCAGTGACGTCGCGGCGTTTCTGACGGAACTGGCAGCGGGAAGTCCCGTCGGCGATATCGTCGAGATCGCTGGCCC
GGAACAGTTCGGAATCGACGAAATCGCGCGGATTTATCTCGCCGCAAACGAAGACCAGCGGCGGGTGATGACGGATCCGT
CCGTTCCCTATTTCGACGTCGAATTGACCGGCAATGTGCTGCTTCCCGGTGCCGGCGCCCGCACGGCGAGCCAGACGCTC
TCCAACTGGCTCTTCCAATCGATGGCCGCCTAA

Upstream 100 bases:

>100_bases
AGGACTAGGACGCCGGACCTCCGGCACGATGGAAGCTCTCTGACTTTCCGGTCATTGTCGGCTGAACCGCGAGCATTAGG
CTGAGATGGAGAGGGTCGAT

Downstream 100 bases:

>100_bases
CGGCCCGTTTGAAATTGCGCGAGGTAATACCTTTCGAAAAGAAGGCATTACCGAGCTGCCAGAATGGCCACGACCGTTAC
CGCCAAAGGGCAGGTCCCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NAD-Dependent Epimerase/Dehydratase; Secreted Protein; DTDP-4-Dehydrorhamnose Reductase; Nucleoside-Diphosphate Sugar Epimerase; Nucleoside-Diphosphate-Sugar Epimerase; NmrA-Like; Nucleotide-Diphosphate-Sugar Epimerase/NmrA Family Protein; GCN5-Related N-Acetyltransferase; Transcriptional Regulator LysR-Family; LysR Family Transcriptional Regulator; NmrA-Like Protein; Nmra-Like Family Protein; NAD Dependent Epimerase/Dehydratase Family; NAD Dependent Epimerase/Dehydratase Family Protein

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MKIMVAGASGIVGTQLTAKLRRAGHDVTAASLSLGVDTVTGRGLEAAMAGNEIVIDVTNAASFGDSSAFDFFRTSTKNLL
AAAAGANVRHYLALSVVGTPCLVESDYFRAKLVQENLIRASGRGYTLLRSTQFYEFINGLIEIGAEGDVLRLPPAAMRPV
AASDVAAFLTELAAGSPVGDIVEIAGPEQFGIDEIARIYLAANEDQRRVMTDPSVPYFDVELTGNVLLPGAGARTASQTL
SNWLFQSMAA

Sequences:

>Translated_250_residues
MKIMVAGASGIVGTQLTAKLRRAGHDVTAASLSLGVDTVTGRGLEAAMAGNEIVIDVTNAASFGDSSAFDFFRTSTKNLL
AAAAGANVRHYLALSVVGTPCLVESDYFRAKLVQENLIRASGRGYTLLRSTQFYEFINGLIEIGAEGDVLRLPPAAMRPV
AASDVAAFLTELAAGSPVGDIVEIAGPEQFGIDEIARIYLAANEDQRRVMTDPSVPYFDVELTGNVLLPGAGARTASQTL
SNWLFQSMAA
>Mature_250_residues
MKIMVAGASGIVGTQLTAKLRRAGHDVTAASLSLGVDTVTGRGLEAAMAGNEIVIDVTNAASFGDSSAFDFFRTSTKNLL
AAAAGANVRHYLALSVVGTPCLVESDYFRAKLVQENLIRASGRGYTLLRSTQFYEFINGLIEIGAEGDVLRLPPAAMRPV
AASDVAAFLTELAAGSPVGDIVEIAGPEQFGIDEIARIYLAANEDQRRVMTDPSVPYFDVELTGNVLLPGAGARTASQTL
SNWLFQSMAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26288; Mature: 26288

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIMVAGASGIVGTQLTAKLRRAGHDVTAASLSLGVDTVTGRGLEAAMAGNEIVIDVTNA
CEEEEECCCCCCHHHHHHHHHHCCCCCEEHHHCCCCCCCCCCCEEEEECCCEEEEEECCC
ASFGDSSAFDFFRTSTKNLLAAAAGANVRHYLALSVVGTPCLVESDYFRAKLVQENLIRA
CCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEECHHHHHHHHHHHHHHC
SGRGYTLLRSTQFYEFINGLIEIGAEGDVLRLPPAAMRPVAASDVAAFLTELAAGSPVGD
CCCCEEEEEHHHHHHHHHHHHHCCCCCCEEECCHHHHCCCHHHHHHHHHHHHHCCCCCCH
IVEIAGPEQFGIDEIARIYLAANEDQRRVMTDPSVPYFDVELTGNVLLPGAGARTASQTL
HEEECCCCCCCHHHHHEEEEECCCCCCEEECCCCCCEEEEEEECCEEECCCCCHHHHHHH
SNWLFQSMAA
HHHHHHHHCC
>Mature Secondary Structure
MKIMVAGASGIVGTQLTAKLRRAGHDVTAASLSLGVDTVTGRGLEAAMAGNEIVIDVTNA
CEEEEECCCCCCHHHHHHHHHHCCCCCEEHHHCCCCCCCCCCCEEEEECCCEEEEEECCC
ASFGDSSAFDFFRTSTKNLLAAAAGANVRHYLALSVVGTPCLVESDYFRAKLVQENLIRA
CCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEECHHHHHHHHHHHHHHC
SGRGYTLLRSTQFYEFINGLIEIGAEGDVLRLPPAAMRPVAASDVAAFLTELAAGSPVGD
CCCCEEEEEHHHHHHHHHHHHHCCCCCCEEECCHHHHCCCHHHHHHHHHHHHHCCCCCCH
IVEIAGPEQFGIDEIARIYLAANEDQRRVMTDPSVPYFDVELTGNVLLPGAGARTASQTL
HEEECCCCCCCHHHHHEEEEECCCCCCEEECCCCCCEEEEEEECCEEECCCCCHHHHHHH
SNWLFQSMAA
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA