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The map label for this gene is 190894727

Identifier: 190894727

GI number: 190894727

Start: 414965

End: 416767

Strand: Reverse

Name: 190894727

Synonym: RHECIAT_PC0000392

Alternate gene names: NA

Gene position: 416767-414965 (Counterclockwise)

Preceding gene: 190894733

Following gene: 190894726

Centisome position: 38.18

GC content: 61.84

Gene sequence:

>1803_bases
TTGGATCAGAGGTCCCGTGTACTGTCGTTGCGAGACGTCGCCAGCCAGATCAACAGCGGCGGCGATCTCCAGGCCGTTCT
CCAGCAACTGATTGCCGCCGCCTGCCGTCATGCCGACTGGGCGTTGGGATCGATCATGAGCATCGATGCCGCGCATGGTT
ACGCCTATGTCATCGTACGCTACGATCCGACACTGATAGAACGGCAGCTGCCGGACAAATGGGAATTGGCGACAAGCCCG
TCCTTAATCGCTCTGCAGCGAAACGAGCCCGTCTATATCCCCGATGCACGCGAGTCTGCCGAGTTTCCCGGCTATCGGGC
GGAAGCCTTCGATCGTGACTACCGCACCGTCCTGGTCTTGCCCATGAATTGCAAGGATGCGGAAGGCCGGCCGATGGTCC
TAAGCGTCATCGCCCGACAGATCACCGAAGTATCGGAGGACGATCTTGCCTTCCTCGGCACCATCATCCATCTGGGCGCA
ATCGCCGTGGAGCGCGAACATCGGCTTGAAGCCGAGAAGCGGTCGGCGCAGCGGCTCGAGCGAGCCCTGAAGGCGCATAC
CTCGCTGCTCGAACATGTACTCAGCGACGGGTCGGTCGCACCGCTTTCGGCGATGGTCGGAATGATGCTGCCGAACCCGA
CGGTCGTAATCGACTTCACCGCCAATCAGGTGATCGCCGGGCGCCCGCCGAACGCGCTATACGACGAGACCTCCTGGCCG
GAAGCCGCTTCCACGACTCTCGCCCGGCCGCTGATGAAGGCGGCGCGTGATGCAATCGAACACGGCACGACGAATGCGGC
CAACCTTTTTCTCGACGACGGCACACAACGTTTCCGGATCTCCGCCCGCATCGAGGCGCTGATGGTCGACAATCAGCTGG
TCGGAGCGCTGATCATCTTCCCGACCTCCCGGGAATTCAGCGATCTCGACTTGCTGATGCTCGACAGCGCCAAATTCGCG
CTGAGCGTCCAGATGATGCGCAGCTTCATCCGGTTCCGGTTTGAAACCCGGACGCAGACCGAGCTGTTCTTCGAAATCGT
CGAGGCCCGGTGGCGGGACGCCGGCGATGTCGCGCAACGGGCTCAGCGGCTCGGATTGAGCTTTGCCATCCCGCAGCAAA
TGATTGTCGTCGATTTCCCCGATAAGACAAAGGCCTTCGGCGGGGCTTCCGTCGATGTCGAACACACGCTGACGCGCATT
ATGCAACAGGCCGCGGTGCAGGCCAACCTGATCGCGATCGACGGCGGTGTCGTTTGCCTCATGCCCTATGACACGAGCAA
GCGTCAGGAGCGCACGGCCAAGCTCACCCGCCGCATCGCCGAGGAACTCGGCCGCTATTTCGGCGAGGCGCCCGTTGTCG
TCTCAGGCAACCGCTGTGATACGCTACCCGGCTACCCGGCGGCTTGGGAGCGGTGCGGCCGCATGATCCGCATCGGCCGT
TCCTTTGGATTGACCGGTGCTATTTCAGCTCAGGACTTCGGGCCGCTTCCAATGTTGGTTGCCGCCTCGGAAGCCGGCGA
CGTGCGTAGTTTTGTCCAGGAAAGTGTCGGGGCTATCGCCGAGCACGATCGCGAAAACGGGACGCCCTATATGGAAACGC
TCTCCACCTATCTGCAGGAGGGGTGCCGCAGCCAGGCCTGCGCCGACACGATGGGCCTGCATGTTACGACGCTGCGTTAC
CGGCTCTCGCGCATTCAGGAGCTTTTCGGCGTCGATGTCGAGACTCCGGAAAAGCGCTTTGCCGTCGAATTGGCAATCCG
TCTGCACGGCGTCATCGACAATCGCTCGACCGCCCAAAGATAG

Upstream 100 bases:

>100_bases
TTTTCGCCGTAAGATAAATCAGCGGCTTCCTATGAATCCAAGTAGATTTGTCCGCTGAGCGCGCGCATAGTCGCTGACGG
ATGTCAACGAGGCGAAACGA

Downstream 100 bases:

>100_bases
TTCTCCACCCCTTATATACGCTCGTTCGAAGCTCTGCCCCTCGCGCCTTTTTGTCTCCTCTGGATCGAGGCAGAAGTTTT
TCACCCCATCCTACGAAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator CdaR; CdaR Family Transcriptional Regulator; Transcriptional Regulator; PucR Family Transcriptional Regulator; GAF Domain Protein; Phytochrome Sensor Protein; Transcriptional Regulator CdaR Family

Number of amino acids: Translated: 600; Mature: 600

Protein sequence:

>600_residues
MDQRSRVLSLRDVASQINSGGDLQAVLQQLIAAACRHADWALGSIMSIDAAHGYAYVIVRYDPTLIERQLPDKWELATSP
SLIALQRNEPVYIPDARESAEFPGYRAEAFDRDYRTVLVLPMNCKDAEGRPMVLSVIARQITEVSEDDLAFLGTIIHLGA
IAVEREHRLEAEKRSAQRLERALKAHTSLLEHVLSDGSVAPLSAMVGMMLPNPTVVIDFTANQVIAGRPPNALYDETSWP
EAASTTLARPLMKAARDAIEHGTTNAANLFLDDGTQRFRISARIEALMVDNQLVGALIIFPTSREFSDLDLLMLDSAKFA
LSVQMMRSFIRFRFETRTQTELFFEIVEARWRDAGDVAQRAQRLGLSFAIPQQMIVVDFPDKTKAFGGASVDVEHTLTRI
MQQAAVQANLIAIDGGVVCLMPYDTSKRQERTAKLTRRIAEELGRYFGEAPVVVSGNRCDTLPGYPAAWERCGRMIRIGR
SFGLTGAISAQDFGPLPMLVAASEAGDVRSFVQESVGAIAEHDRENGTPYMETLSTYLQEGCRSQACADTMGLHVTTLRY
RLSRIQELFGVDVETPEKRFAVELAIRLHGVIDNRSTAQR

Sequences:

>Translated_600_residues
MDQRSRVLSLRDVASQINSGGDLQAVLQQLIAAACRHADWALGSIMSIDAAHGYAYVIVRYDPTLIERQLPDKWELATSP
SLIALQRNEPVYIPDARESAEFPGYRAEAFDRDYRTVLVLPMNCKDAEGRPMVLSVIARQITEVSEDDLAFLGTIIHLGA
IAVEREHRLEAEKRSAQRLERALKAHTSLLEHVLSDGSVAPLSAMVGMMLPNPTVVIDFTANQVIAGRPPNALYDETSWP
EAASTTLARPLMKAARDAIEHGTTNAANLFLDDGTQRFRISARIEALMVDNQLVGALIIFPTSREFSDLDLLMLDSAKFA
LSVQMMRSFIRFRFETRTQTELFFEIVEARWRDAGDVAQRAQRLGLSFAIPQQMIVVDFPDKTKAFGGASVDVEHTLTRI
MQQAAVQANLIAIDGGVVCLMPYDTSKRQERTAKLTRRIAEELGRYFGEAPVVVSGNRCDTLPGYPAAWERCGRMIRIGR
SFGLTGAISAQDFGPLPMLVAASEAGDVRSFVQESVGAIAEHDRENGTPYMETLSTYLQEGCRSQACADTMGLHVTTLRY
RLSRIQELFGVDVETPEKRFAVELAIRLHGVIDNRSTAQR
>Mature_600_residues
MDQRSRVLSLRDVASQINSGGDLQAVLQQLIAAACRHADWALGSIMSIDAAHGYAYVIVRYDPTLIERQLPDKWELATSP
SLIALQRNEPVYIPDARESAEFPGYRAEAFDRDYRTVLVLPMNCKDAEGRPMVLSVIARQITEVSEDDLAFLGTIIHLGA
IAVEREHRLEAEKRSAQRLERALKAHTSLLEHVLSDGSVAPLSAMVGMMLPNPTVVIDFTANQVIAGRPPNALYDETSWP
EAASTTLARPLMKAARDAIEHGTTNAANLFLDDGTQRFRISARIEALMVDNQLVGALIIFPTSREFSDLDLLMLDSAKFA
LSVQMMRSFIRFRFETRTQTELFFEIVEARWRDAGDVAQRAQRLGLSFAIPQQMIVVDFPDKTKAFGGASVDVEHTLTRI
MQQAAVQANLIAIDGGVVCLMPYDTSKRQERTAKLTRRIAEELGRYFGEAPVVVSGNRCDTLPGYPAAWERCGRMIRIGR
SFGLTGAISAQDFGPLPMLVAASEAGDVRSFVQESVGAIAEHDRENGTPYMETLSTYLQEGCRSQACADTMGLHVTTLRY
RLSRIQELFGVDVETPEKRFAVELAIRLHGVIDNRSTAQR

Specific function: Unknown

COG id: COG2508

COG function: function code TQ; Regulator of polyketide synthase expression

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66490; Mature: 66490

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQRSRVLSLRDVASQINSGGDLQAVLQQLIAAACRHADWALGSIMSIDAAHGYAYVIVR
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHEEECCCCEEEEEEE
YDPTLIERQLPDKWELATSPSLIALQRNEPVYIPDARESAEFPGYRAEAFDRDYRTVLVL
ECCHHHHHCCCCCCCCCCCCCEEEEECCCCEECCCCCCCCCCCCCCHHHCCCCCEEEEEE
PMNCKDAEGRPMVLSVIARQITEVSEDDLAFLGTIIHLGAIAVEREHRLEAEKRSAQRLE
ECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
RALKAHTSLLEHVLSDGSVAPLSAMVGMMLPNPTVVIDFTANQVIAGRPPNALYDETSWP
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEECCCCEECCCCCCCCCCCCCCC
EAASTTLARPLMKAARDAIEHGTTNAANLFLDDGTQRFRISARIEALMVDNQLVGALIIF
CHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEEEEEEECCCEEEEEEEE
PTSREFSDLDLLMLDSAKFALSVQMMRSFIRFRFETRTQTELFFEIVEARWRDAGDVAQR
ECCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHH
AQRLGLSFAIPQQMIVVDFPDKTKAFGGASVDVEHTLTRIMQQAAVQANLIAIDGGVVCL
HHHCCCEEECCCEEEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHHHEEEEEECCCEEEE
MPYDTSKRQERTAKLTRRIAEELGRYFGEAPVVVSGNRCDTLPGYPAAWERCGRMIRIGR
ECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHH
SFGLTGAISAQDFGPLPMLVAASEAGDVRSFVQESVGAIAEHDRENGTPYMETLSTYLQE
HCCCCEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
GCRSQACADTMGLHVTTLRYRLSRIQELFGVDVETPEKRFAVELAIRLHGVIDNRSTAQR
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MDQRSRVLSLRDVASQINSGGDLQAVLQQLIAAACRHADWALGSIMSIDAAHGYAYVIVR
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHEEECCCCEEEEEEE
YDPTLIERQLPDKWELATSPSLIALQRNEPVYIPDARESAEFPGYRAEAFDRDYRTVLVL
ECCHHHHHCCCCCCCCCCCCCEEEEECCCCEECCCCCCCCCCCCCCHHHCCCCCEEEEEE
PMNCKDAEGRPMVLSVIARQITEVSEDDLAFLGTIIHLGAIAVEREHRLEAEKRSAQRLE
ECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
RALKAHTSLLEHVLSDGSVAPLSAMVGMMLPNPTVVIDFTANQVIAGRPPNALYDETSWP
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEECCCCEECCCCCCCCCCCCCCC
EAASTTLARPLMKAARDAIEHGTTNAANLFLDDGTQRFRISARIEALMVDNQLVGALIIF
CHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEEEEEEECCCEEEEEEEE
PTSREFSDLDLLMLDSAKFALSVQMMRSFIRFRFETRTQTELFFEIVEARWRDAGDVAQR
ECCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHH
AQRLGLSFAIPQQMIVVDFPDKTKAFGGASVDVEHTLTRIMQQAAVQANLIAIDGGVVCL
HHHCCCEEECCCEEEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHHHEEEEEECCCEEEE
MPYDTSKRQERTAKLTRRIAEELGRYFGEAPVVVSGNRCDTLPGYPAAWERCGRMIRIGR
ECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHH
SFGLTGAISAQDFGPLPMLVAASEAGDVRSFVQESVGAIAEHDRENGTPYMETLSTYLQE
HCCCCEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
GCRSQACADTMGLHVTTLRYRLSRIQELFGVDVETPEKRFAVELAIRLHGVIDNRSTAQR
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA