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The map label for this gene is ocdc [H]

Identifier: 190894710

GI number: 190894710

Start: 399088

End: 400071

Strand: Reverse

Name: ocdc [H]

Synonym: RHECIAT_PC0000375

Alternate gene names: 190894710

Gene position: 400071-399088 (Counterclockwise)

Preceding gene: 190894711

Following gene: 190894709

Centisome position: 36.65

GC content: 65.85

Gene sequence:

>984_bases
ATGATCATTCTGACGGAGGCGGAATTGCGAGAGATTGTCGTGCTCGACCGCGATGCGGTCGCCTGCGTCGAAGAGGCTTT
CGCAGCGCTCGCGACCAAGGCCGTCGCCATGCCGCCGATCCTGCGGCTCGACATTCCCGAGCGTCGAGGCGAAGTCGATG
TGAAGACCGCCTATGTGCCGGGGATAGAAAGCTTCGCGATCAAGATCAGCCCCGGCTTCTTCGACAATCCCAGGATCGGC
CTGCCGAGCACCAATGGCATGATGGTGCTGCTGTCGAGCCGGACCGGCCTGGTGCAGGCGCTGCTCCTCGACAACGGTTA
TCTCACCGACGTGCGCACCGCCGCGGCCGGCGCCGTCGCGGCAAAACATCTGTCGCGGCAAAATTCCAGCGTGGCGGCGA
TCTTCGGCGCCGGCATGCAGGCGCAGCTGCAGCTGGAAGCGCTGAGGCTGGTGCGGCCGATCCGTGACGCCAGGATATGG
GCGCGGGATGCGGCCAGGGCTAAGGGCGTGGCTGCGGAACTGGCGGCAAGGCTCGGCTTTCCCGTCAACGCGATATCCGA
CCCGCGGCAAGCAATGTCCGGTGCCGATATTGTCGTGACCACCACGCCCGCGGAAAAACCGATCATCGACGCCGGCTGGC
TCGAACCCGGGCAGCATCTGACGGCCATGGGATCGGATGCCGAGCACAAGAACGAGATCGATCCCGCGGCCATCGCCGGC
GCCGGCCTCTATGTCGCCGACAGCCTGAAGCAGACGCGCCGGCTCGGCGAGCTGCACCATGCGATCGAAGCGGGCCTCGT
CGCAGGCGATGCCGATTTCGCCGAACTCGGCCGGATCATCGCCGGGCGAATGCCGGGCAGAATGAGCAGCGACCAGATCA
CCATCGCAGACCTCACGGGAACCGGCATTCAGGACACCGCCATTGCCACGCTCGCCTTTGCCCGCGCCGACGCGGCGAAG
GCCGGCACCACATTCGAAAGCTGA

Upstream 100 bases:

>100_bases
TCGTTGCGGTCCTTTCCGGCTGCAATGTCGACATGGAACAGCATCGTCGGGTGACGGACGGCGAGACTGCAATCTGCGCG
GAGGATGGCCCATGAGCCGG

Downstream 100 bases:

>100_bases
CCGGCGCGGCGCCGGAGAAGAAGGGAAGAGATATGACCCAGCCCCATCTGAAGTTTTCGCTCGGCGAATATGCCGCGCGG
CTGGAAAAGACACGGCGCGC

Product: ectoine utilization protein EutC

Products: NA

Alternate protein names: OCD 1 [H]

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MIILTEAELREIVVLDRDAVACVEEAFAALATKAVAMPPILRLDIPERRGEVDVKTAYVPGIESFAIKISPGFFDNPRIG
LPSTNGMMVLLSSRTGLVQALLLDNGYLTDVRTAAAGAVAAKHLSRQNSSVAAIFGAGMQAQLQLEALRLVRPIRDARIW
ARDAARAKGVAAELAARLGFPVNAISDPRQAMSGADIVVTTTPAEKPIIDAGWLEPGQHLTAMGSDAEHKNEIDPAAIAG
AGLYVADSLKQTRRLGELHHAIEAGLVAGDADFAELGRIIAGRMPGRMSSDQITIADLTGTGIQDTAIATLAFARADAAK
AGTTFES

Sequences:

>Translated_327_residues
MIILTEAELREIVVLDRDAVACVEEAFAALATKAVAMPPILRLDIPERRGEVDVKTAYVPGIESFAIKISPGFFDNPRIG
LPSTNGMMVLLSSRTGLVQALLLDNGYLTDVRTAAAGAVAAKHLSRQNSSVAAIFGAGMQAQLQLEALRLVRPIRDARIW
ARDAARAKGVAAELAARLGFPVNAISDPRQAMSGADIVVTTTPAEKPIIDAGWLEPGQHLTAMGSDAEHKNEIDPAAIAG
AGLYVADSLKQTRRLGELHHAIEAGLVAGDADFAELGRIIAGRMPGRMSSDQITIADLTGTGIQDTAIATLAFARADAAK
AGTTFES
>Mature_327_residues
MIILTEAELREIVVLDRDAVACVEEAFAALATKAVAMPPILRLDIPERRGEVDVKTAYVPGIESFAIKISPGFFDNPRIG
LPSTNGMMVLLSSRTGLVQALLLDNGYLTDVRTAAAGAVAAKHLSRQNSSVAAIFGAGMQAQLQLEALRLVRPIRDARIW
ARDAARAKGVAAELAARLGFPVNAISDPRQAMSGADIVVTTTPAEKPIIDAGWLEPGQHLTAMGSDAEHKNEIDPAAIAG
AGLYVADSLKQTRRLGELHHAIEAGLVAGDADFAELGRIIAGRMPGRMSSDQITIADLTGTGIQDTAIATLAFARADAAK
AGTTFES

Specific function: Unknown

COG id: COG2423

COG function: function code E; Predicted ornithine cyclodeaminase, mu-crystallin homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ornithine cyclodeaminase family [H]

Homologues:

Organism=Homo sapiens, GI4503065, Length=288, Percent_Identity=28.8194444444444, Blast_Score=108, Evalue=6e-24,
Organism=Homo sapiens, GI62241008, Length=288, Percent_Identity=28.8194444444444, Blast_Score=108, Evalue=6e-24,
Organism=Drosophila melanogaster, GI24642678, Length=291, Percent_Identity=27.4914089347079, Blast_Score=80, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014334
- InterPro:   IPR016040
- InterPro:   IPR003462 [H]

Pfam domain/function: PF02423 OCD_Mu_crystall [H]

EC number: =4.3.1.12 [H]

Molecular weight: Translated: 34365; Mature: 34365

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIILTEAELREIVVLDRDAVACVEEAFAALATKAVAMPPILRLDIPERRGEVDVKTAYVP
CEEEECHHCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEECC
GIESFAIKISPGFFDNPRIGLPSTNGMMVLLSSRTGLVQALLLDNGYLTDVRTAAAGAVA
CCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHH
AKHLSRQNSSVAAIFGAGMQAQLQLEALRLVRPIRDARIWARDAARAKGVAAELAARLGF
HHHHHCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC
PVNAISDPRQAMSGADIVVTTTPAEKPIIDAGWLEPGQHLTAMGSDAEHKNEIDPAAIAG
CCCCCCCHHHHHCCCCEEEEECCCCCCCEECCCCCCCCCEEECCCCCCCCCCCCHHHHCC
AGLYVADSLKQTRRLGELHHAIEAGLVAGDADFAELGRIIAGRMPGRMSSDQITIADLTG
CCHHHHHHHHHHHHHHHHHHHHHHCEEECCCCHHHHHHHHHCCCCCCCCCCCEEEEEECC
TGIQDTAIATLAFARADAAKAGTTFES
CCCCHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIILTEAELREIVVLDRDAVACVEEAFAALATKAVAMPPILRLDIPERRGEVDVKTAYVP
CEEEECHHCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEECC
GIESFAIKISPGFFDNPRIGLPSTNGMMVLLSSRTGLVQALLLDNGYLTDVRTAAAGAVA
CCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHH
AKHLSRQNSSVAAIFGAGMQAQLQLEALRLVRPIRDARIWARDAARAKGVAAELAARLGF
HHHHHCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC
PVNAISDPRQAMSGADIVVTTTPAEKPIIDAGWLEPGQHLTAMGSDAEHKNEIDPAAIAG
CCCCCCCHHHHHCCCCEEEEECCCCCCCEECCCCCCCCCEEECCCCCCCCCCCCHHHHCC
AGLYVADSLKQTRRLGELHHAIEAGLVAGDADFAELGRIIAGRMPGRMSSDQITIADLTG
CCHHHHHHHHHHHHHHHHHHHHHHCEEECCCCHHHHHHHHHCCCCCCCCCCCEEEEEECC
TGIQDTAIATLAFARADAAKAGTTFES
CCCCHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481431 [H]