| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190894704
Identifier: 190894704
GI number: 190894704
Start: 391642
End: 392223
Strand: Reverse
Name: 190894704
Synonym: RHECIAT_PC0000367
Alternate gene names: NA
Gene position: 392223-391642 (Counterclockwise)
Preceding gene: 190894705
Following gene: 190894703
Centisome position: 35.93
GC content: 57.04
Gene sequence:
>582_bases ATGCCGAGTTCGCCGCTGCCTTCAAATTTTCCGGAGAGACCAAGACAGCACAGTCGGACGTGCAGCGGGACTACCTGCTG GACGCCTATGAGGCGTCCTTCGAGACCGAGGCGGACACCATCGACGACGAGACCGATTTATTTCGAGGAGAACATCGCGT CGATTACGTCGGTCGACGATTTCCTGTCGAGTTCGCGGCTGAAGAACTATGTGCTGACGGCGTTCGGCCTCAGCACCGAA TACACATCGAGCAGCTTTCGGAAAGATGTCCTTACGAGCGATCTCGACGACGCCGACAGTTTCGTCAACCAGCTCGACGA CGACGTCTATGTCAGCCTCGCAAAGGCCTTCAACTTCAACGAGGACGGCTCCGTCGACGGCGGTCTCCTGTCGGAAGACC AGATTTCACTGGTGACAAGTGCTTATGCAGTGGCCTCTGCGACGATTGCTTCCAAAGTGATCCTACTCCGTTACCACCGC CCAACGTCGTTCGGCGGCCGCCACTCCGAGACCGATCGGGAACACTTCTTGTGGGAGAACTCTCCAGAAGTCGCTTGGGC GACCTCTTTGGAGTCCACATAA
Upstream 100 bases:
>100_bases TGCCGCCGGCATCGGCGCCGCCTGAGCGAACGAGAGCATTTCTGACTCTTGGACCTCAGCGATTCATCGAGCTTAGCCAA CAGCTTGAGTGACAGCCGTT
Downstream 100 bases:
>100_bases TCGCCGCACATTTTGCTTCGACCATCTTGGCAACCCCAAGCGGTCAGAACGCAGCAAGTGGTCCGCTCGGAAAGCGGTCG AAAAAAATGCTGCACTGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MPSSPLPSNFPERPRQHSRTCSGTTCWTPMRRPSRPRRTPSTTRPIYFEENIASITSVDDFLSSSRLKNYVLTAFGLSTE YTSSSFRKDVLTSDLDDADSFVNQLDDDVYVSLAKAFNFNEDGSVDGGLLSEDQISLVTSAYAVASATIASKVILLRYHR PTSFGGRHSETDREHFLWENSPEVAWATSLEST
Sequences:
>Translated_193_residues MPSSPLPSNFPERPRQHSRTCSGTTCWTPMRRPSRPRRTPSTTRPIYFEENIASITSVDDFLSSSRLKNYVLTAFGLSTE YTSSSFRKDVLTSDLDDADSFVNQLDDDVYVSLAKAFNFNEDGSVDGGLLSEDQISLVTSAYAVASATIASKVILLRYHR PTSFGGRHSETDREHFLWENSPEVAWATSLEST >Mature_192_residues PSSPLPSNFPERPRQHSRTCSGTTCWTPMRRPSRPRRTPSTTRPIYFEENIASITSVDDFLSSSRLKNYVLTAFGLSTEY TSSSFRKDVLTSDLDDADSFVNQLDDDVYVSLAKAFNFNEDGSVDGGLLSEDQISLVTSAYAVASATIASKVILLRYHRP TSFGGRHSETDREHFLWENSPEVAWATSLEST
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21545; Mature: 21414
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSSPLPSNFPERPRQHSRTCSGTTCWTPMRRPSRPRRTPSTTRPIYFEENIASITSVDD CCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHH FLSSSRLKNYVLTAFGLSTEYTSSSFRKDVLTSDLDDADSFVNQLDDDVYVSLAKAFNFN HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHCCC EDGSVDGGLLSEDQISLVTSAYAVASATIASKVILLRYHRPTSFGGRHSETDREHFLWEN CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCHHHCCCCC SPEVAWATSLEST CCCEEEECCCCCC >Mature Secondary Structure PSSPLPSNFPERPRQHSRTCSGTTCWTPMRRPSRPRRTPSTTRPIYFEENIASITSVDD CCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHH FLSSSRLKNYVLTAFGLSTEYTSSSFRKDVLTSDLDDADSFVNQLDDDVYVSLAKAFNFN HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHCCC EDGSVDGGLLSEDQISLVTSAYAVASATIASKVILLRYHRPTSFGGRHSETDREHFLWEN CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCHHHCCCCC SPEVAWATSLEST CCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA