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The map label for this gene is casR

Identifier: 190894705

GI number: 190894705

Start: 392279

End: 392947

Strand: Reverse

Name: casR

Synonym: RHECIAT_PC0000368

Alternate gene names: NA

Gene position: 392947-392279 (Counterclockwise)

Preceding gene: 190894706

Following gene: 190894704

Centisome position: 36.0

GC content: 63.38

Gene sequence:

>669_bases
ATGAAAGCTATCGATGAGCCCGCGGAGGAGCCGCGCAGACGAGGCCGGCCGAAAGTCTCCACCGACGAAGACAAGCGCGT
GCAGATCGTCGAAGTGGCCCGCCGGGTTTTTGTGAAATACGGATATGCCGGAAGCACGACCGCGGTCGTCGCCTCCGAAG
CGGGCGTTTCCAAACAGACGCTCTATCGCCTGTTTGAGAGCAAAGAAGAGCTGTTCGCCGCCGTCGTCGCGGCGTATCGG
CGCCTGATGCTTGATCTGCCACGGCCCGCCGAAGACTGTTCGATCGCCGAAAGCCTTGAACGGATCTTCATGCTCGACAT
GGACGAGGACAGAGATGCGGACCGCGCCGGTTTCCTGCAACTCGTCTTCCGTGAAGCAGCACAATTTCCTGAGCTCGTCG
ACATCCTGCAACGGGAAGGCATGCTCGCCAGCCGACAGGAGCTGGCCGACTGGCTGAGCGATCGCCGGGCCGAGGGCCGG
CTTACCCTGGACGATCCGCTGAGCGGAGCCCGGATGCTGATGGACATGATCTTCGGAGGCATGGGACCGCCGGAGGGGCC
GTGCTCAGGCCTGGCCCGAGCGGGCAGCGCTGCTTGCCCATCTTCGCCGCTCAATTGCGATCTTTGCCGCCGGCATCGGC
GCCGCCTGAGCGAACGAGAGCATTTCTGA

Upstream 100 bases:

>100_bases
ATCGAAATCGCTAATGCTACAACCGAAGAAATCCCTCAGAAATCGTAGTGCGCTTTCTCAGGTCGTCGGCGTGCGCTTCG
GCAGGGCGGGTTAGACGGTC

Downstream 100 bases:

>100_bases
CTCTTGGACCTCAGCGATTCATCGAGCTTAGCCAACAGCTTGAGTGACAGCCGTTATGCCGAGTTCGCCGCTGCCTTCAA
ATTTTCCGGAGAGACCAAGA

Product: TetR family calsymin transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Calsymin Transcriptional Regulator; Calsymin Transcriptional Regulator Protein TetR Family; Transcription Regulator TetR; Transcriptional Regulator TetR

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MKAIDEPAEEPRRRGRPKVSTDEDKRVQIVEVARRVFVKYGYAGSTTAVVASEAGVSKQTLYRLFESKEELFAAVVAAYR
RLMLDLPRPAEDCSIAESLERIFMLDMDEDRDADRAGFLQLVFREAAQFPELVDILQREGMLASRQELADWLSDRRAEGR
LTLDDPLSGARMLMDMIFGGMGPPEGPCSGLARAGSAACPSSPLNCDLCRRHRRRLSEREHF

Sequences:

>Translated_222_residues
MKAIDEPAEEPRRRGRPKVSTDEDKRVQIVEVARRVFVKYGYAGSTTAVVASEAGVSKQTLYRLFESKEELFAAVVAAYR
RLMLDLPRPAEDCSIAESLERIFMLDMDEDRDADRAGFLQLVFREAAQFPELVDILQREGMLASRQELADWLSDRRAEGR
LTLDDPLSGARMLMDMIFGGMGPPEGPCSGLARAGSAACPSSPLNCDLCRRHRRRLSEREHF
>Mature_222_residues
MKAIDEPAEEPRRRGRPKVSTDEDKRVQIVEVARRVFVKYGYAGSTTAVVASEAGVSKQTLYRLFESKEELFAAVVAAYR
RLMLDLPRPAEDCSIAESLERIFMLDMDEDRDADRAGFLQLVFREAAQFPELVDILQREGMLASRQELADWLSDRRAEGR
LTLDDPLSGARMLMDMIFGGMGPPEGPCSGLARAGSAACPSSPLNCDLCRRHRRRLSEREHF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24969; Mature: 24969

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAIDEPAEEPRRRGRPKVSTDEDKRVQIVEVARRVFVKYGYAGSTTAVVASEAGVSKQT
CCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHH
LYRLFESKEELFAAVVAAYRRLMLDLPRPAEDCSIAESLERIFMLDMDEDRDADRAGFLQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
LVFREAAQFPELVDILQREGMLASRQELADWLSDRRAEGRLTLDDPLSGARMLMDMIFGG
HHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCC
MGPPEGPCSGLARAGSAACPSSPLNCDLCRRHRRRLSEREHF
CCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKAIDEPAEEPRRRGRPKVSTDEDKRVQIVEVARRVFVKYGYAGSTTAVVASEAGVSKQT
CCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHH
LYRLFESKEELFAAVVAAYRRLMLDLPRPAEDCSIAESLERIFMLDMDEDRDADRAGFLQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
LVFREAAQFPELVDILQREGMLASRQELADWLSDRRAEGRLTLDDPLSGARMLMDMIFGG
HHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCC
MGPPEGPCSGLARAGSAACPSSPLNCDLCRRHRRRLSEREHF
CCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA