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The map label for this gene is peb1A [H]

Identifier: 190894703

GI number: 190894703

Start: 390555

End: 391394

Strand: Reverse

Name: peb1A [H]

Synonym: RHECIAT_PC0000366

Alternate gene names: 190894703

Gene position: 391394-390555 (Counterclockwise)

Preceding gene: 190894704

Following gene: 190894702

Centisome position: 35.86

GC content: 60.83

Gene sequence:

>840_bases
ATGACCATTTCCTTTCGCACCGGCGTGATGTCGCTGGCCGTCGCCGCGCTCATGTCCACGCCTGCACTGGCCGACGGAAG
CAAGCTCGATGAAGTGCTGGCCCGCGGCCATCTCGTTCTCGGCACGGGCAGCACCAATGCGCCTTGGCACTTCAAGAGCG
CGGACGACAAGCTTCAGGGCTTCGATGTCGACATGGGCCATATCATCGCCAAGGCCCTGTTCGGCGATCCGGAGAAGATC
GAATATGTCAATCAGTCCTCGGACGCCCGTATTCCGAACATCACCACCGACAAGGTCGATATTACCTGCCAGTTCATGAC
CGTTACGGGGGAACGCGCCCAGCAGGTGGCCTTTACCATTCCCTATTATCGCGAGGGCGTCGGCCTGATGCTCAAGGCGG
ACGGAAAGTATGCCGATTATGCCGCTCTGAAGGCGGCGGGTTCCTCGGCCACCATCTCGGTTCTGCAGAACGTCTATGCG
GAGACGATGGTGCATGCGGCATTGCCCGAGGCGACCGTCGACCAGTACGAATCCGTCGACCTGATCTACCAGGCGCTGGA
GTCGGGGCGTGCGGATGCCGTCGCCACGGACCAGTCGTCGCTCGCCTGGTACATGACGCAGAACCCAGGCCGCTACAAGG
ATGCCGGCTACGGCTGGAACCCGCAGACCTATGCCTGCGCCGTCAAACGCGGTGACCAGGACTGGCTGAACTTCGTCAAC
ACTGCTCTTCACGAAGCCATGACCGGCGTCGAATTCGACTTCTACGCCAAGTCCTTCAAGACCTGGTTCGGCAAAGACCT
GACGCCGCCGCAGATCGGCTTCCCCGTCGAATTCAAGTGA

Upstream 100 bases:

>100_bases
TGACAATTCATCGCCGATGGCACTTGATACGCTTATTCCAGTAAAACAGACATGCGTCCATTATACTGGAATAATGGGAA
CCATCCATAAGGGGAACGCT

Downstream 100 bases:

>100_bases
CGGTCATGCGAGGCGGGATCTCAAACCCGCTCCGCAGGAACAGGATGATCTTAGGCCGGGGTCGGCCTAAGATTGGTATC
CGGTTCTAAATCGAGGAGTT

Product: putative amino acid ABC transporter substrate-binding protein

Products: NA

Alternate protein names: CBF1; PEB1 [H]

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MTISFRTGVMSLAVAALMSTPALADGSKLDEVLARGHLVLGTGSTNAPWHFKSADDKLQGFDVDMGHIIAKALFGDPEKI
EYVNQSSDARIPNITTDKVDITCQFMTVTGERAQQVAFTIPYYREGVGLMLKADGKYADYAALKAAGSSATISVLQNVYA
ETMVHAALPEATVDQYESVDLIYQALESGRADAVATDQSSLAWYMTQNPGRYKDAGYGWNPQTYACAVKRGDQDWLNFVN
TALHEAMTGVEFDFYAKSFKTWFGKDLTPPQIGFPVEFK

Sequences:

>Translated_279_residues
MTISFRTGVMSLAVAALMSTPALADGSKLDEVLARGHLVLGTGSTNAPWHFKSADDKLQGFDVDMGHIIAKALFGDPEKI
EYVNQSSDARIPNITTDKVDITCQFMTVTGERAQQVAFTIPYYREGVGLMLKADGKYADYAALKAAGSSATISVLQNVYA
ETMVHAALPEATVDQYESVDLIYQALESGRADAVATDQSSLAWYMTQNPGRYKDAGYGWNPQTYACAVKRGDQDWLNFVN
TALHEAMTGVEFDFYAKSFKTWFGKDLTPPQIGFPVEFK
>Mature_278_residues
TISFRTGVMSLAVAALMSTPALADGSKLDEVLARGHLVLGTGSTNAPWHFKSADDKLQGFDVDMGHIIAKALFGDPEKIE
YVNQSSDARIPNITTDKVDITCQFMTVTGERAQQVAFTIPYYREGVGLMLKADGKYADYAALKAAGSSATISVLQNVYAE
TMVHAALPEATVDQYESVDLIYQALESGRADAVATDQSSLAWYMTQNPGRYKDAGYGWNPQTYACAVKRGDQDWLNFVNT
ALHEAMTGVEFDFYAKSFKTWFGKDLTPPQIGFPVEFK

Specific function: Common antigen and a major cell adherence molecule. Most probably involved, with PEB1C, in a binding-protein-dependent transport system for an amino acid. May be involved in binding to intestinal cells [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell surface [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1788228, Length=263, Percent_Identity=26.615969581749, Blast_Score=88, Evalue=5e-19,
Organism=Escherichia coli, GI1787031, Length=259, Percent_Identity=28.957528957529, Blast_Score=88, Evalue=8e-19,
Organism=Escherichia coli, GI1786876, Length=263, Percent_Identity=24.7148288973384, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1787088, Length=232, Percent_Identity=26.2931034482759, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1787085, Length=208, Percent_Identity=25.4807692307692, Blast_Score=71, Evalue=8e-14,
Organism=Escherichia coli, GI1788648, Length=238, Percent_Identity=25.6302521008403, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1788649, Length=239, Percent_Identity=25.5230125523013, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015683
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 30535; Mature: 30403

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: PS01039 SBP_BACTERIAL_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTISFRTGVMSLAVAALMSTPALADGSKLDEVLARGHLVLGTGSTNAPWHFKSADDKLQG
CEEEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEECCCCCCCEEECCCCCCCCC
FDVDMGHIIAKALFGDPEKIEYVNQSSDARIPNITTDKVDITCQFMTVTGERAQQVAFTI
CCCCHHHHHHHHHCCCHHHHHEECCCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEEEEC
PYYREGVGLMLKADGKYADYAALKAAGSSATISVLQNVYAETMVHAALPEATVDQYESVD
CHHHCCCEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LIYQALESGRADAVATDQSSLAWYMTQNPGRYKDAGYGWNPQTYACAVKRGDQDWLNFVN
HHHHHHHCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHH
TALHEAMTGVEFDFYAKSFKTWFGKDLTPPQIGFPVEFK
HHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TISFRTGVMSLAVAALMSTPALADGSKLDEVLARGHLVLGTGSTNAPWHFKSADDKLQG
EEEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEECCCCCCCEEECCCCCCCCC
FDVDMGHIIAKALFGDPEKIEYVNQSSDARIPNITTDKVDITCQFMTVTGERAQQVAFTI
CCCCHHHHHHHHHCCCHHHHHEECCCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEEEEC
PYYREGVGLMLKADGKYADYAALKAAGSSATISVLQNVYAETMVHAALPEATVDQYESVD
CHHHCCCEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LIYQALESGRADAVATDQSSLAWYMTQNPGRYKDAGYGWNPQTYACAVKRGDQDWLNFVN
HHHHHHHCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHH
TALHEAMTGVEFDFYAKSFKTWFGKDLTPPQIGFPVEFK
HHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10688204; 1885571 [H]