| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is glnP [H]
Identifier: 190894702
GI number: 190894702
Start: 389729
End: 390391
Strand: Reverse
Name: glnP [H]
Synonym: RHECIAT_PC0000365
Alternate gene names: 190894702
Gene position: 390391-389729 (Counterclockwise)
Preceding gene: 190894703
Following gene: 190894701
Centisome position: 35.77
GC content: 61.09
Gene sequence:
>663_bases ATGGGTTACACGCTGAATTTCGCGGTCGTCTGGCGCAATTTCGACTTTCTGTTAAGCGGCCTTGCGCTCAGCCTCGGCCT TGCAGTGATCTCGATCCTGATCGGGGCCGCAATCGGTCTTGTCGTGGCCTTTGCGCTGATATCCAGGAGCCGCTTCGCAC TCGTGCCGGCGCGCGTCTATGTCACCGTCATTCGCAACCTGCCGATACTCGTCCTCGTGCTTTTCGCCTTTTTCGCGCTG CCGCAGATGGGCTTGCGCCTCGACAAGATGAAAAGCTTCGTGCTGGTTCTCTCCCTCTATTCCGGCGCCTATCTGGCCGA AGTGTTCCGTGCCGGCCTGCTGTCGATTCCGAGAGGACTGACCGAAGCGGGCCTCGCCATCGGCCTGACCGGGATGCAGA TCCGCAGTTCCATCATTGCCCCGCTGATGCTGCGCAACGTGCTGCCGTCGCTTTCGTCGACGATCATCTCGCTCTTCAAG GATACCTCGCTCGCCGCCGCCATCGCCGTGCCCGAACTGACCTTTGCCGCCCGCAAGATCAATGTCGAGAGCTTCCGCGT CATAGAAACCTGGATGGTCACGTCAGCCCTCTATGTCGCGACCTGCTTCCTCATCGCCGCCCTGATGCGCCTCGTCGAGC GGCGTCTGGCCCTGCCGAGATAG
Upstream 100 bases:
>100_bases GGCCTAAGATTGGTATCCGGTTCTAAATCGAGGAGTTGGAGCATGATGTCGTCCGAACCGCTCGCGCGTTCGACATCAGC TCCGGTCTGAAAGGGCCTGC
Downstream 100 bases:
>100_bases TCCCGATGTCCCACACTTTTCTCGAACAACTCTGGATCGCCCGCTACGTCATCATGAACGGCATCGCCATGACGGTGTCG ATCTCCCTGCTGGCCATTCT
Product: putative amino acid ABC transporter permease
Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MGYTLNFAVVWRNFDFLLSGLALSLGLAVISILIGAAIGLVVAFALISRSRFALVPARVYVTVIRNLPILVLVLFAFFAL PQMGLRLDKMKSFVLVLSLYSGAYLAEVFRAGLLSIPRGLTEAGLAIGLTGMQIRSSIIAPLMLRNVLPSLSSTIISLFK DTSLAAAIAVPELTFAARKINVESFRVIETWMVTSALYVATCFLIAALMRLVERRLALPR
Sequences:
>Translated_220_residues MGYTLNFAVVWRNFDFLLSGLALSLGLAVISILIGAAIGLVVAFALISRSRFALVPARVYVTVIRNLPILVLVLFAFFAL PQMGLRLDKMKSFVLVLSLYSGAYLAEVFRAGLLSIPRGLTEAGLAIGLTGMQIRSSIIAPLMLRNVLPSLSSTIISLFK DTSLAAAIAVPELTFAARKINVESFRVIETWMVTSALYVATCFLIAALMRLVERRLALPR >Mature_219_residues GYTLNFAVVWRNFDFLLSGLALSLGLAVISILIGAAIGLVVAFALISRSRFALVPARVYVTVIRNLPILVLVLFAFFALP QMGLRLDKMKSFVLVLSLYSGAYLAEVFRAGLLSIPRGLTEAGLAIGLTGMQIRSSIIAPLMLRNVLPSLSSTIISLFKD TSLAAAIAVPELTFAARKINVESFRVIETWMVTSALYVATCFLIAALMRLVERRLALPR
Specific function: Part of the binding-protein-dependent transport system for glutamine; probably responsible for the translocation of the substrate across the membrane [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787030, Length=215, Percent_Identity=35.8139534883721, Blast_Score=128, Evalue=3e-31, Organism=Escherichia coli, GI1788226, Length=201, Percent_Identity=34.8258706467662, Blast_Score=111, Evalue=4e-26, Organism=Escherichia coli, GI1788645, Length=219, Percent_Identity=26.9406392694064, Blast_Score=88, Evalue=4e-19, Organism=Escherichia coli, GI1788646, Length=213, Percent_Identity=26.7605633802817, Blast_Score=82, Evalue=2e-17, Organism=Escherichia coli, GI1786873, Length=225, Percent_Identity=28.8888888888889, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI48994930, Length=134, Percent_Identity=33.5820895522388, Blast_Score=80, Evalue=9e-17, Organism=Escherichia coli, GI1787087, Length=223, Percent_Identity=26.457399103139, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1786874, Length=231, Percent_Identity=27.7056277056277, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI87082239, Length=207, Percent_Identity=28.0193236714976, Blast_Score=77, Evalue=8e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 23922; Mature: 23791
Theoretical pI: Translated: 11.37; Mature: 11.37
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYTLNFAVVWRNFDFLLSGLALSLGLAVISILIGAAIGLVVAFALISRSRFALVPARVY CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH VTVIRNLPILVLVLFAFFALPQMGLRLDKMKSFVLVLSLYSGAYLAEVFRAGLLSIPRGL HHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCH TEAGLAIGLTGMQIRSSIIAPLMLRNVLPSLSSTIISLFKDTSLAAAIAVPELTFAARKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NVESFRVIETWMVTSALYVATCFLIAALMRLVERRLALPR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GYTLNFAVVWRNFDFLLSGLALSLGLAVISILIGAAIGLVVAFALISRSRFALVPARVY CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH VTVIRNLPILVLVLFAFFALPQMGLRLDKMKSFVLVLSLYSGAYLAEVFRAGLLSIPRGL HHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCH TEAGLAIGLTGMQIRSSIIAPLMLRNVLPSLSSTIISLFKDTSLAAAIAVPELTFAARKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NVESFRVIETWMVTSALYVATCFLIAALMRLVERRLALPR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamine [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]