Definition Rhizobium etli CIAT 652 plasmid pC, complete sequence.
Accession NC_010997
Length 1,091,523

Click here to switch to the map view.

The map label for this gene is glnP [H]

Identifier: 190894701

GI number: 190894701

Start: 389064

End: 389723

Strand: Reverse

Name: glnP [H]

Synonym: RHECIAT_PC0000364

Alternate gene names: 190894701

Gene position: 389723-389064 (Counterclockwise)

Preceding gene: 190894702

Following gene: 190894700

Centisome position: 35.7

GC content: 61.82

Gene sequence:

>660_bases
ATGTCCCACACTTTTCTCGAACAACTCTGGATCGCCCGCTACGTCATCATGAACGGCATCGCCATGACGGTGTCGATCTC
CCTGCTGGCCATTCTCGCTGGCTCCGTCCTCGGCGTTTTCGTCGGCCTGGCGCTCGTCTATGGCGGCATGATTTTACGCC
TCATCGTGCGCGCCTATACGGATATCATCCGCGGCACGCCGGTGCTCGTGCTCGTGCTGGCAAGCTATTACGTCTCCGCT
GCAGTCGGTCTCGACCTCGGGCCGTTCTCCGCCGGCGTGCTCGCCCTTGCCGTCTTCTGCTCTTCCCATGTCGGCGAGAT
CGTGCGCGGAGCGCTCCAGGCGATCCCGAAGGGGCAGACGGAAGCCGCCAAGGCGATCGGCCTGACCTTTACCCAGACCT
TTACCTCGGTGCTGTGGCCGCAGGCCATGCGCCAGTGCCTGCCGGCATGGGTGAATACGGCGGCCGAAATGGTGAAGGCG
TCGACGCTGCTCTCGGTCGTCGGCGTCGCGGAGCTTCTGCTGCGCACGCAGGAGATCATTTCCCGCAATTTCATGAGCCT
CCAGTTCTATTTTCTGGCCGGTGGTCTCTATTTCATCGTCAACTACGGCATCGAGCACTTCGGCAAATATGTCGAGCGCA
AGACCGCCCTGCCGTCCTGA

Upstream 100 bases:

>100_bases
CCTGGATGGTCACGTCAGCCCTCTATGTCGCGACCTGCTTCCTCATCGCCGCCCTGATGCGCCTCGTCGAGCGGCGTCTG
GCCCTGCCGAGATAGTCCCG

Downstream 100 bases:

>100_bases
GGAGACTTCCCGATGGCCAAGACCATTCTCGACATCAAGGGTCTGCGCAAGACTTACGGTATCCACGAGGTTCTCAAAGG
CGTCGATTGCGCTGTGCAGG

Product: putative amino acid ABC transporter permease

Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MSHTFLEQLWIARYVIMNGIAMTVSISLLAILAGSVLGVFVGLALVYGGMILRLIVRAYTDIIRGTPVLVLVLASYYVSA
AVGLDLGPFSAGVLALAVFCSSHVGEIVRGALQAIPKGQTEAAKAIGLTFTQTFTSVLWPQAMRQCLPAWVNTAAEMVKA
STLLSVVGVAELLLRTQEIISRNFMSLQFYFLAGGLYFIVNYGIEHFGKYVERKTALPS

Sequences:

>Translated_219_residues
MSHTFLEQLWIARYVIMNGIAMTVSISLLAILAGSVLGVFVGLALVYGGMILRLIVRAYTDIIRGTPVLVLVLASYYVSA
AVGLDLGPFSAGVLALAVFCSSHVGEIVRGALQAIPKGQTEAAKAIGLTFTQTFTSVLWPQAMRQCLPAWVNTAAEMVKA
STLLSVVGVAELLLRTQEIISRNFMSLQFYFLAGGLYFIVNYGIEHFGKYVERKTALPS
>Mature_218_residues
SHTFLEQLWIARYVIMNGIAMTVSISLLAILAGSVLGVFVGLALVYGGMILRLIVRAYTDIIRGTPVLVLVLASYYVSAA
VGLDLGPFSAGVLALAVFCSSHVGEIVRGALQAIPKGQTEAAKAIGLTFTQTFTSVLWPQAMRQCLPAWVNTAAEMVKAS
TLLSVVGVAELLLRTQEIISRNFMSLQFYFLAGGLYFIVNYGIEHFGKYVERKTALPS

Specific function: Part of the binding-protein-dependent transport system for glutamine; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787030, Length=208, Percent_Identity=33.6538461538462, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1788226, Length=208, Percent_Identity=29.3269230769231, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1788646, Length=196, Percent_Identity=29.0816326530612, Blast_Score=87, Evalue=6e-19,
Organism=Escherichia coli, GI1787087, Length=220, Percent_Identity=25.9090909090909, Blast_Score=85, Evalue=3e-18,
Organism=Escherichia coli, GI87082239, Length=202, Percent_Identity=27.7227722772277, Blast_Score=84, Evalue=8e-18,
Organism=Escherichia coli, GI1788645, Length=218, Percent_Identity=27.0642201834862, Blast_Score=80, Evalue=7e-17,
Organism=Escherichia coli, GI1786873, Length=210, Percent_Identity=24.2857142857143, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1786874, Length=216, Percent_Identity=26.8518518518519, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1787086, Length=209, Percent_Identity=22.9665071770335, Blast_Score=68, Evalue=4e-13,
Organism=Escherichia coli, GI48994930, Length=129, Percent_Identity=28.6821705426357, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 23640; Mature: 23509

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHTFLEQLWIARYVIMNGIAMTVSISLLAILAGSVLGVFVGLALVYGGMILRLIVRAYT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DIIRGTPVLVLVLASYYVSAAVGLDLGPFSAGVLALAVFCSSHVGEIVRGALQAIPKGQT
HHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
EAAKAIGLTFTQTFTSVLWPQAMRQCLPAWVNTAAEMVKASTLLSVVGVAELLLRTQEII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRNFMSLQFYFLAGGLYFIVNYGIEHFGKYVERKTALPS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SHTFLEQLWIARYVIMNGIAMTVSISLLAILAGSVLGVFVGLALVYGGMILRLIVRAYT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DIIRGTPVLVLVLASYYVSAAVGLDLGPFSAGVLALAVFCSSHVGEIVRGALQAIPKGQT
HHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
EAAKAIGLTFTQTFTSVLWPQAMRQCLPAWVNTAAEMVKASTLLSVVGVAELLLRTQEII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRNFMSLQFYFLAGGLYFIVNYGIEHFGKYVERKTALPS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-glutamine [Periplasm]; H2O [C]

Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]