Definition Rhizobium etli CIAT 652 plasmid pC, complete sequence.
Accession NC_010997
Length 1,091,523

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The map label for this gene is yhaO [H]

Identifier: 190894581

GI number: 190894581

Start: 244473

End: 245741

Strand: Reverse

Name: yhaO [H]

Synonym: RHECIAT_PC0000243

Alternate gene names: 190894581

Gene position: 245741-244473 (Counterclockwise)

Preceding gene: 190894582

Following gene: 190894580

Centisome position: 22.51

GC content: 65.72

Gene sequence:

>1269_bases
ATGGCTTATCGTTTCGTCCACACTGCCGATCTCCATCTCGACTCTCCGCTACGGTCGCTGGCGCTTCGCAACGCCGAGCT
GGCCGATCTCGTGAGCGACGCCAGTCGGCAGGTGCTGATCGCGATCGTCGACCTTTGCCTCGAGGAACAGGTCGATGCGC
TGGTCATCGCCGGCGATCTCTATGACGGCGAGCAGACGTCGATGAAGACGGCGCGCTTCCTGGCAAGCCAGCTGGAACGG
CTGCACCGGGCGGGGATTTGCGTCTTCAAGATCCGCGGCAATCACGATGCGATGTCGAAGATCGCCAGAGAGCTGGTGAT
GCCCGACACGGTGAAGGTCTTCGGCGGCCATGCCGAGACCGTGGAGGCGACGAAAGGCAGCCTGTCGGTTGCGATGCACG
GTCTGAGCTTTGCCAAGCCGCAGGCGCCGGACCCGCTTCTGCCGAAGTTCAAGCCGCCGGTCGCAGGTGCCGTCAATATC
GGCATCATGCATACGAGCCTTGCCGGATCCGCCGGCCATGATGTCTATGCGCCCTGCAACGTGCTCGACCTTCACGCCTC
GGGATTCGACTACTGGGCGCTCGGGCATCTTCATCAGCGCAGCCAGTATCCCGGCACGGCGACGGTCATCATGCCCGGCA
TGCCGCAGGGCCGCGACATTAACGAGGCGGGCGTCAAGACGGTGTCGCTGGTGACCGTGGCGGACAACAGGACGGTGACG
GTCGAGGAGCGGCGCACCAGCATCGCGCAGTTCGAGCGCGTCGATGTCGACCTCACGGGTGTCGACGATTGGCGTGATGC
GGCCATGGCGATCGAAGCGGCACTCATGGGGCAGCGCGACCATACCGCCTCGCCGCATCTCGTCGCGCGCCTCAGGCTTT
CCGGTCGCACGCCGCTCTCCTGGCAGCTTCGCCGCGATATCGACCTCATGCAGGCGGAAGCCGAGCAGCGCGGTGACCGC
ATCGGCCGGACCTGGATCGAGAAGCTGGAGCTCGCCTTAGAAGCGCCGGTGCCCCTCGCCGACGAAGCAGTTGCCGATCC
CGTCATCGAGCTCGGCGCGCTGATGCGGGACGATGTCATCGCCCGCAGCGGGTTTCGCGACGATGTCAGGGAGATGGTCC
GCGACCTGCTCGCCGACCTGCCGCCCGAGAGCCGGGCATTTGCCGGGCATGACGAGGCGGGTTTCGAACGCTTCATCGAC
AGCCTTCTCGCCGATGGCGCCGAGGATATCGCCGCCCGGATGAAGGCCGCGGAGCGGGGAGACAGCTGA

Upstream 100 bases:

>100_bases
GCTCCATATTCTCTTCCTCCCGGTCAGGTGACAGCGATCGCGCGTTCATCGGTCCGAGGGCACCCGCTCATCATTCTGTC
GCAACGCGATTTCTGCATTC

Downstream 100 bases:

>100_bases
TGCGCCTGCGCCGTCTCGACCTCGTCCGTTATGGCAAGTTCACCGACCACTCGATCGATTTCGGTGCGGCCCGCACGGGT
TCGCCGGATCTGCACATCGT

Product: putative serine/threonine-specific phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 422; Mature: 421

Protein sequence:

>422_residues
MAYRFVHTADLHLDSPLRSLALRNAELADLVSDASRQVLIAIVDLCLEEQVDALVIAGDLYDGEQTSMKTARFLASQLER
LHRAGICVFKIRGNHDAMSKIARELVMPDTVKVFGGHAETVEATKGSLSVAMHGLSFAKPQAPDPLLPKFKPPVAGAVNI
GIMHTSLAGSAGHDVYAPCNVLDLHASGFDYWALGHLHQRSQYPGTATVIMPGMPQGRDINEAGVKTVSLVTVADNRTVT
VEERRTSIAQFERVDVDLTGVDDWRDAAMAIEAALMGQRDHTASPHLVARLRLSGRTPLSWQLRRDIDLMQAEAEQRGDR
IGRTWIEKLELALEAPVPLADEAVADPVIELGALMRDDVIARSGFRDDVREMVRDLLADLPPESRAFAGHDEAGFERFID
SLLADGAEDIAARMKAAERGDS

Sequences:

>Translated_422_residues
MAYRFVHTADLHLDSPLRSLALRNAELADLVSDASRQVLIAIVDLCLEEQVDALVIAGDLYDGEQTSMKTARFLASQLER
LHRAGICVFKIRGNHDAMSKIARELVMPDTVKVFGGHAETVEATKGSLSVAMHGLSFAKPQAPDPLLPKFKPPVAGAVNI
GIMHTSLAGSAGHDVYAPCNVLDLHASGFDYWALGHLHQRSQYPGTATVIMPGMPQGRDINEAGVKTVSLVTVADNRTVT
VEERRTSIAQFERVDVDLTGVDDWRDAAMAIEAALMGQRDHTASPHLVARLRLSGRTPLSWQLRRDIDLMQAEAEQRGDR
IGRTWIEKLELALEAPVPLADEAVADPVIELGALMRDDVIARSGFRDDVREMVRDLLADLPPESRAFAGHDEAGFERFID
SLLADGAEDIAARMKAAERGDS
>Mature_421_residues
AYRFVHTADLHLDSPLRSLALRNAELADLVSDASRQVLIAIVDLCLEEQVDALVIAGDLYDGEQTSMKTARFLASQLERL
HRAGICVFKIRGNHDAMSKIARELVMPDTVKVFGGHAETVEATKGSLSVAMHGLSFAKPQAPDPLLPKFKPPVAGAVNIG
IMHTSLAGSAGHDVYAPCNVLDLHASGFDYWALGHLHQRSQYPGTATVIMPGMPQGRDINEAGVKTVSLVTVADNRTVTV
EERRTSIAQFERVDVDLTGVDDWRDAAMAIEAALMGQRDHTASPHLVARLRLSGRTPLSWQLRRDIDLMQAEAEQRGDRI
GRTWIEKLELALEAPVPLADEAVADPVIELGALMRDDVIARSGFRDDVREMVRDLLADLPPESRAFAGHDEAGFERFIDS
LLADGAEDIAARMKAAERGDS

Specific function: Unknown

COG id: COG0420

COG function: function code L; DNA repair exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallophosphoesterase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004843
- InterPro:   IPR014576 [H]

Pfam domain/function: PF00149 Metallophos [H]

EC number: NA

Molecular weight: Translated: 46029; Mature: 45898

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYRFVHTADLHLDSPLRSLALRNAELADLVSDASRQVLIAIVDLCLEEQVDALVIAGDL
CCEEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC
YDGEQTSMKTARFLASQLERLHRAGICVFKIRGNHDAMSKIARELVMPDTVKVFGGHAET
CCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHCCCCHHHHHCCCCHH
VEATKGSLSVAMHGLSFAKPQAPDPLLPKFKPPVAGAVNIGIMHTSLAGSAGHDVYAPCN
HHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCC
VLDLHASGFDYWALGHLHQRSQYPGTATVIMPGMPQGRDINEAGVKTVSLVTVADNRTVT
EEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHCCEEEEEEEEECCCEEE
VEERRTSIAQFERVDVDLTGVDDWRDAAMAIEAALMGQRDHTASPHLVARLRLSGRTPLS
EHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCC
WQLRRDIDLMQAEAEQRGDRIGRTWIEKLELALEAPVPLADEAVADPVIELGALMRDDVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
ARSGFRDDVREMVRDLLADLPPESRAFAGHDEAGFERFIDSLLADGAEDIAARMKAAERG
HHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
DS
CC
>Mature Secondary Structure 
AYRFVHTADLHLDSPLRSLALRNAELADLVSDASRQVLIAIVDLCLEEQVDALVIAGDL
CEEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC
YDGEQTSMKTARFLASQLERLHRAGICVFKIRGNHDAMSKIARELVMPDTVKVFGGHAET
CCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHCCCCHHHHHCCCCHH
VEATKGSLSVAMHGLSFAKPQAPDPLLPKFKPPVAGAVNIGIMHTSLAGSAGHDVYAPCN
HHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCC
VLDLHASGFDYWALGHLHQRSQYPGTATVIMPGMPQGRDINEAGVKTVSLVTVADNRTVT
EEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHCCEEEEEEEEECCCEEE
VEERRTSIAQFERVDVDLTGVDDWRDAAMAIEAALMGQRDHTASPHLVARLRLSGRTPLS
EHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCC
WQLRRDIDLMQAEAEQRGDRIGRTWIEKLELALEAPVPLADEAVADPVIELGALMRDDVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
ARSGFRDDVREMVRDLLADLPPESRAFAGHDEAGFERFIDSLLADGAEDIAARMKAAERG
HHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
DS
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]