Click here to switch to the map view.

The map label for this gene is 190894423

Identifier: 190894423

GI number: 190894423

Start: 81348

End: 81665

Strand: Reverse

Name: 190894423

Synonym: RHECIAT_PC0000085

Alternate gene names: NA

Gene position: 81665-81348 (Counterclockwise)

Preceding gene: 190894424

Following gene: 190894416

Centisome position: 7.48

GC content: 58.81

Gene sequence:

>318_bases
ATGACATCCGGCGGCTGGAAGGAATTGGCATTCGGCCCCTTCCGCGATCAGGTGACCATCCATTGGATCCGTCCCTTCGA
GGACGACCACCCGGGCGTGGCGCTTCTGAAATACGAGGCCGGCGCCAGCGTTCCGCGCCATCGGCATGAGGGACTGGAAA
CAATTCTCGTTCTTGATGGCGTACAATCCGACGAGGCGGGCGATTATGGTCGCGGCAGTTATATCGTCAACGCTCCCGGT
ACCGAACATTCGGTCTGGAGCGAAACCGGCTGCGTCGTGCTCATCCAATGGGATCGGCCGGTGAAAATATTGGAATAG

Upstream 100 bases:

>100_bases
ATCGCCATGATCCGCGCCCAGGGCGCGATCGTCGGCTGGACCGCCCATGTCGACGACATTCTGGAAAGCATTGCCCATGC
CTGAAACCACCCGCGAACTT

Downstream 100 bases:

>100_bases
GACGTCGCATAAAACCGGCCGGCCTTCGACATTGCCCCGTTGCGCCAGTCTGCCGCAATGACGTCAGCACGCCGCGATCG
TTGCATTATTCCTGGCCGCG

Product: putative allophanate hydrolase

Products: NA

Alternate protein names: Allophanate Hydrolase; Transcription Negative Regulator ChrR; Anti-Sigma Factor; Transcription Negative Regulator

Number of amino acids: Translated: 105; Mature: 104

Protein sequence:

>105_residues
MTSGGWKELAFGPFRDQVTIHWIRPFEDDHPGVALLKYEAGASVPRHRHEGLETILVLDGVQSDEAGDYGRGSYIVNAPG
TEHSVWSETGCVVLIQWDRPVKILE

Sequences:

>Translated_105_residues
MTSGGWKELAFGPFRDQVTIHWIRPFEDDHPGVALLKYEAGASVPRHRHEGLETILVLDGVQSDEAGDYGRGSYIVNAPG
TEHSVWSETGCVVLIQWDRPVKILE
>Mature_104_residues
TSGGWKELAFGPFRDQVTIHWIRPFEDDHPGVALLKYEAGASVPRHRHEGLETILVLDGVQSDEAGDYGRGSYIVNAPGT
EHSVWSETGCVVLIQWDRPVKILE

Specific function: Unknown

COG id: COG3806

COG function: function code T; Anti-sigma factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11699; Mature: 11568

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSGGWKELAFGPFRDQVTIHWIRPFEDDHPGVALLKYEAGASVPRHRHEGLETILVLDG
CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEC
VQSDEAGDYGRGSYIVNAPGTEHSVWSETGCVVLIQWDRPVKILE
CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEECCCCEEECC
>Mature Secondary Structure 
TSGGWKELAFGPFRDQVTIHWIRPFEDDHPGVALLKYEAGASVPRHRHEGLETILVLDG
CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEC
VQSDEAGDYGRGSYIVNAPGTEHSVWSETGCVVLIQWDRPVKILE
CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEECCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA