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The map label for this gene is yqeZ [H]

Identifier: 18977905

GI number: 18977905

Start: 1430753

End: 1432096

Strand: Direct

Name: yqeZ [H]

Synonym: PF1533

Alternate gene names: 18977905

Gene position: 1430753-1432096 (Clockwise)

Preceding gene: 18977904

Following gene: 18977906

Centisome position: 74.98

GC content: 41.74

Gene sequence:

>1344_bases
ATGACCATGAAAAAGGCAATAATGATACTTACGATCTTCACTTTGCTACTCTTTGCCCAGGGTGTGAAAGGAAGAGACAG
CAATGTTGTTTATGTAGCTCAAATTACAGGCCAGATAACATCATACACCTTTGACCAATTTGACCGCTACATCTCAATAG
CTGAAAGAAACAATGCTAGGGCAATAATCATTGAGCTAGACACGCCAGGAGGAAGAGGAGACGCAATGATGGAAATAATT
CAGAGAATACAACAGGCAAAGGTTCCTGTAATAATTTATGTCTATCCTCCAGGAGCATCAGCTGCTTCTGCGGGAACTTA
CATAGCCTTAGGCGCCCATTTAATAGCCATGGCTCCTGGGACAAGCATAGGAGCCTGTAGGCCTATTCTCGGATATTCAC
AAAATGGATCAATAGTAGAAGCACCCCCTAAGATCGTTAATCATTATATAGCCTACATAAAAAGCCTCGCCGAGGAAAGT
GGGAGAAATGCCACTATAGCTGAGAAGTTTATAACAGAAGACCTCAGCCTTACCCCAGAAGAAGCTCTAAAGTATGGAGT
TATTGAAGTCATAGCAAGAGATGTCGATGATCTTCTGGAGAAAGCAAACGGAATGACAACTAAAATCCCAGTGAATGGAA
GATACATAAAACTAAACTTCACTAATGTGGAAGTTCGGTATTTAGAACCCTCCTTAAAAGACAAACTAATTACCTACATA
ACTGATCCAAATATATCCTACATACTCTTAACTCTGGGAATCTGGGCCCTAATACTCGGGTTTCTAACTCCTGGATGGCA
TGTTCCAGAGACAATTGGAGCAATAATGATAATCCTTGCAATCCTAGGGTTCGGTTACTTTGGCTACAACGCAGCGGGCC
TATTATTAATAATAGTGGGGATGTTGTTCTTTGTTGCAGAAGCCCTAACACCAACATTTGGCTTATTCACAGTAGCTGGT
CTTATTTCCTTTATCCTAGGGGGAATTCTACTGTTTGGAGGGGGGAACGTGGAGTATCTAGTGAGTAAAGATGTCTTTTC
CCAGCTCAGACTTATAATAATAATCCTGGGGGTGATAATTGCACTGTTCTTTGCCTTTGGCATGGCTGCAGTAATAAGAG
CACATAGAAGAAAAGCTGCCACAGGAAAGGAGGAAATGATAGGAAGTGAAGGAACCGTTGTTGAGGAACTAAATCCGGAG
GGGATGATAAAGGTTAGAGGAGAATTGTGGAAGGCAAGGAGTAAGGATGGAGAAAAAATAGAGAAAGGTGAAAAGGTAAA
AGTTGTGGGAATGGAAGGCTTGACCCTTATTGTTGTTAGAAAGAAAGAGGAGGGTGGTAAGTGA

Upstream 100 bases:

>100_bases
TATTATTTTTTTGGTGATTTTTATGGAGGATTGATTAACCTCTCAAGGTTATGAAGGTCAAAACTTAAATACCTGTATTA
CTACTTTTAGTTGATTAGGG

Downstream 100 bases:

>100_bases
TGGCCACGCCAATAGGGTTTTTTACTGCAGCAATAATTTTGTTATTTATTTTGATTTTCCTTTCAAGTGCAATAAAGATA
GTAAAGGAATATGAGAGGGC

Product: nodulation protein nfeD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 447; Mature: 446

Protein sequence:

>447_residues
MTMKKAIMILTIFTLLLFAQGVKGRDSNVVYVAQITGQITSYTFDQFDRYISIAERNNARAIIIELDTPGGRGDAMMEII
QRIQQAKVPVIIYVYPPGASAASAGTYIALGAHLIAMAPGTSIGACRPILGYSQNGSIVEAPPKIVNHYIAYIKSLAEES
GRNATIAEKFITEDLSLTPEEALKYGVIEVIARDVDDLLEKANGMTTKIPVNGRYIKLNFTNVEVRYLEPSLKDKLITYI
TDPNISYILLTLGIWALILGFLTPGWHVPETIGAIMIILAILGFGYFGYNAAGLLLIIVGMLFFVAEALTPTFGLFTVAG
LISFILGGILLFGGGNVEYLVSKDVFSQLRLIIIILGVIIALFFAFGMAAVIRAHRRKAATGKEEMIGSEGTVVEELNPE
GMIKVRGELWKARSKDGEKIEKGEKVKVVGMEGLTLIVVRKKEEGGK

Sequences:

>Translated_447_residues
MTMKKAIMILTIFTLLLFAQGVKGRDSNVVYVAQITGQITSYTFDQFDRYISIAERNNARAIIIELDTPGGRGDAMMEII
QRIQQAKVPVIIYVYPPGASAASAGTYIALGAHLIAMAPGTSIGACRPILGYSQNGSIVEAPPKIVNHYIAYIKSLAEES
GRNATIAEKFITEDLSLTPEEALKYGVIEVIARDVDDLLEKANGMTTKIPVNGRYIKLNFTNVEVRYLEPSLKDKLITYI
TDPNISYILLTLGIWALILGFLTPGWHVPETIGAIMIILAILGFGYFGYNAAGLLLIIVGMLFFVAEALTPTFGLFTVAG
LISFILGGILLFGGGNVEYLVSKDVFSQLRLIIIILGVIIALFFAFGMAAVIRAHRRKAATGKEEMIGSEGTVVEELNPE
GMIKVRGELWKARSKDGEKIEKGEKVKVVGMEGLTLIVVRKKEEGGK
>Mature_446_residues
TMKKAIMILTIFTLLLFAQGVKGRDSNVVYVAQITGQITSYTFDQFDRYISIAERNNARAIIIELDTPGGRGDAMMEIIQ
RIQQAKVPVIIYVYPPGASAASAGTYIALGAHLIAMAPGTSIGACRPILGYSQNGSIVEAPPKIVNHYIAYIKSLAEESG
RNATIAEKFITEDLSLTPEEALKYGVIEVIARDVDDLLEKANGMTTKIPVNGRYIKLNFTNVEVRYLEPSLKDKLITYIT
DPNISYILLTLGIWALILGFLTPGWHVPETIGAIMIILAILGFGYFGYNAAGLLLIIVGMLFFVAEALTPTFGLFTVAGL
ISFILGGILLFGGGNVEYLVSKDVFSQLRLIIIILGVIIALFFAFGMAAVIRAHRRKAATGKEEMIGSEGTVVEELNPEG
MIKVRGELWKARSKDGEKIEKGEKVKVVGMEGLTLIVVRKKEEGGK

Specific function: Unknown

COG id: COG1030

COG function: function code O; Membrane-bound serine protease (ClpP class)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002810
- InterPro:   IPR002825 [H]

Pfam domain/function: PF01972 DUF114; PF01957 NfeD [H]

EC number: NA

Molecular weight: Translated: 48659; Mature: 48528

Theoretical pI: Translated: 8.30; Mature: 8.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMKKAIMILTIFTLLLFAQGVKGRDSNVVYVAQITGQITSYTFDQFDRYISIAERNNAR
CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHEEHEECCCCE
AIIIELDTPGGRGDAMMEIIQRIQQAKVPVIIYVYPPGASAASAGTYIALGAHLIAMAPG
EEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHEEHHHHEEECCC
TSIGACRPILGYSQNGSIVEAPPKIVNHYIAYIKSLAEESGRNATIAEKFITEDLSLTPE
CCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHH
EALKYGVIEVIARDVDDLLEKANGMTTKIPVNGRYIKLNFTNVEVRYLEPSLKDKLITYI
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEEEEEEEEECCCCCCCEEEEE
TDPNISYILLTLGIWALILGFLTPGWHVPETIGAIMIILAILGFGYFGYNAAGLLLIIVG
ECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHCHHHHHHHHHHHH
MLFFVAEALTPTFGLFTVAGLISFILGGILLFGGGNVEYLVSKDVFSQLRLIIIILGVII
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEECCCCEEEEECHHHHHHHHHHHHHHHHHH
ALFFAFGMAAVIRAHRRKAATGKEEMIGSEGTVVEELNPEGMIKVRGELWKARSKDGEKI
HHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEECCCCCCEEEEHHHHHHHCCCCCCHH
EKGEKVKVVGMEGLTLIVVRKKEEGGK
CCCCEEEEEEECCEEEEEEEECCCCCC
>Mature Secondary Structure 
TMKKAIMILTIFTLLLFAQGVKGRDSNVVYVAQITGQITSYTFDQFDRYISIAERNNAR
CHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHEEHEECCCCE
AIIIELDTPGGRGDAMMEIIQRIQQAKVPVIIYVYPPGASAASAGTYIALGAHLIAMAPG
EEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHEEHHHHEEECCC
TSIGACRPILGYSQNGSIVEAPPKIVNHYIAYIKSLAEESGRNATIAEKFITEDLSLTPE
CCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHH
EALKYGVIEVIARDVDDLLEKANGMTTKIPVNGRYIKLNFTNVEVRYLEPSLKDKLITYI
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEEEEEEEEECCCCCCCEEEEE
TDPNISYILLTLGIWALILGFLTPGWHVPETIGAIMIILAILGFGYFGYNAAGLLLIIVG
ECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHCHHHHHHHHHHHH
MLFFVAEALTPTFGLFTVAGLISFILGGILLFGGGNVEYLVSKDVFSQLRLIIIILGVII
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEECCCCEEEEECHHHHHHHHHHHHHHHHHH
ALFFAFGMAAVIRAHRRKAATGKEEMIGSEGTVVEELNPEGMIKVRGELWKARSKDGEKI
HHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEECCCCCCEEEEHHHHHHHCCCCCCHH
EKGEKVKVVGMEGLTLIVVRKKEEGGK
CCCCEEEEEEECCEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]