Click here to switch to the map view.

The map label for this gene is 18977478

Identifier: 18977478

GI number: 18977478

Start: 1053060

End: 1054040

Strand: Reverse

Name: 18977478

Synonym: PF1106

Alternate gene names: NA

Gene position: 1054040-1053060 (Counterclockwise)

Preceding gene: 18977479

Following gene: 18977476

Centisome position: 55.24

GC content: 40.47

Gene sequence:

>981_bases
ATGAGAAGTAGCATAGTTTTTGGAGCTCTAGGGGCTGTAATCTTGATTTTAGTTAGTCTAACAGTTAAGCCGTTCTTCTC
TTCCTTTTTCTTTGCATTTGTAACAGCTTATGTTCTCTCCCCACTCCACACAAAGCTTTCGGGGAGGTTTGGAGAGAGGC
AAAGTGCACTACTTCTCATTTTCGTTCTCCTAGCTGGGGCGGTTGTATTGATGATAATTCTCATATACACCTTAAATCCC
GTGCTGAATCAAGCATATGTGTACCTTCAAGATATAGATTCTCTGATATCCCGTGCTCCTCTCCCAAAATCAATATCCGA
TGCCTTCTTGGGAATCTACCATCAATTAGCACCTAGAGTTCAGGAGTACATCCTTTCTTTCACTTTCTCCATTCCAAAGT
ACATTCTCCAAGTTGCCGCATACTTGGCATTTGTCTACTACTTCCTTCTTCACGAGAAAGATATTGCTAAATTAATTCCC
TTTGAAAGTGATGAAAAAATGAAGAAAATTCTATACAGGGGGAACTTAACGCTCCAGGCTTTAATAAAGGCGTGGCTTCT
TCTTAATATTGCCAAGGGGATACTCATGACGATTGGCTTCATAATATTTGATGTTTCCAGTTTACCAACTGCCATACTTG
CAGGGATTGTTACGATACTATTTTCTTTTATCCCACTCTTCGAAGGATGGATGGTTTGGCTGGCTGGGTCAATTTACCTC
CTTAATTCAGGACATTTTATTAGAGCTATACTTTTGGCTGCATATGGAGCTGCTCTAGTTTCTCCCTTGCCAGATTTCAC
AATTAGACCAAAAATAGTTGCGAAAGAGGCAAAGTTCGATGAAACTCTCGTGTTGATTGGAATGATTGGAGGAGTATGGG
CCATGGGATTAAAGGGACTAATTATAGGCCCAATAGTCCTAAACGTTGCAGTGGAAATGCTGAGGGAGTGGCAAAAACTA
AATAGAGCTAGAGAATCTTAA

Upstream 100 bases:

>100_bases
GGTATCAGAAAGGCCGTTTTAAATGCGAAGGATGAGAACTTAGGAAGGCAGGATAAGAGGCTTGAAAGTAAGTACGTCGA
AATCCTGAGGGGGCTACTTA

Downstream 100 bases:

>100_bases
CTCCTTTCTCCTCTAACTCCCTCAGGACTTTCTTTTCGTCTTCGGGGTTTATTCCCTTCACGGCATCTTTGAGAAGATAA
ACTTCGAAACCATGCTTTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MRSSIVFGALGAVILILVSLTVKPFFSSFFFAFVTAYVLSPLHTKLSGRFGERQSALLLIFVLLAGAVVLMIILIYTLNP
VLNQAYVYLQDIDSLISRAPLPKSISDAFLGIYHQLAPRVQEYILSFTFSIPKYILQVAAYLAFVYYFLLHEKDIAKLIP
FESDEKMKKILYRGNLTLQALIKAWLLLNIAKGILMTIGFIIFDVSSLPTAILAGIVTILFSFIPLFEGWMVWLAGSIYL
LNSGHFIRAILLAAYGAALVSPLPDFTIRPKIVAKEAKFDETLVLIGMIGGVWAMGLKGLIIGPIVLNVAVEMLREWQKL
NRARES

Sequences:

>Translated_326_residues
MRSSIVFGALGAVILILVSLTVKPFFSSFFFAFVTAYVLSPLHTKLSGRFGERQSALLLIFVLLAGAVVLMIILIYTLNP
VLNQAYVYLQDIDSLISRAPLPKSISDAFLGIYHQLAPRVQEYILSFTFSIPKYILQVAAYLAFVYYFLLHEKDIAKLIP
FESDEKMKKILYRGNLTLQALIKAWLLLNIAKGILMTIGFIIFDVSSLPTAILAGIVTILFSFIPLFEGWMVWLAGSIYL
LNSGHFIRAILLAAYGAALVSPLPDFTIRPKIVAKEAKFDETLVLIGMIGGVWAMGLKGLIIGPIVLNVAVEMLREWQKL
NRARES
>Mature_326_residues
MRSSIVFGALGAVILILVSLTVKPFFSSFFFAFVTAYVLSPLHTKLSGRFGERQSALLLIFVLLAGAVVLMIILIYTLNP
VLNQAYVYLQDIDSLISRAPLPKSISDAFLGIYHQLAPRVQEYILSFTFSIPKYILQVAAYLAFVYYFLLHEKDIAKLIP
FESDEKMKKILYRGNLTLQALIKAWLLLNIAKGILMTIGFIIFDVSSLPTAILAGIVTILFSFIPLFEGWMVWLAGSIYL
LNSGHFIRAILLAAYGAALVSPLPDFTIRPKIVAKEAKFDETLVLIGMIGGVWAMGLKGLIIGPIVLNVAVEMLREWQKL
NRARES

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 36283; Mature: 36283

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSSIVFGALGAVILILVSLTVKPFFSSFFFAFVTAYVLSPLHTKLSGRFGERQSALLLI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
FVLLAGAVVLMIILIYTLNPVLNQAYVYLQDIDSLISRAPLPKSISDAFLGIYHQLAPRV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
QEYILSFTFSIPKYILQVAAYLAFVYYFLLHEKDIAKLIPFESDEKMKKILYRGNLTLQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHH
LIKAWLLLNIAKGILMTIGFIIFDVSSLPTAILAGIVTILFSFIPLFEGWMVWLAGSIYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHE
LNSGHFIRAILLAAYGAALVSPLPDFTIRPKIVAKEAKFDETLVLIGMIGGVWAMGLKGL
ECCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
IIGPIVLNVAVEMLREWQKLNRARES
HHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRSSIVFGALGAVILILVSLTVKPFFSSFFFAFVTAYVLSPLHTKLSGRFGERQSALLLI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
FVLLAGAVVLMIILIYTLNPVLNQAYVYLQDIDSLISRAPLPKSISDAFLGIYHQLAPRV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
QEYILSFTFSIPKYILQVAAYLAFVYYFLLHEKDIAKLIPFESDEKMKKILYRGNLTLQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHH
LIKAWLLLNIAKGILMTIGFIIFDVSSLPTAILAGIVTILFSFIPLFEGWMVWLAGSIYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHE
LNSGHFIRAILLAAYGAALVSPLPDFTIRPKIVAKEAKFDETLVLIGMIGGVWAMGLKGL
ECCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
IIGPIVLNVAVEMLREWQKLNRARES
HHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]