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The map label for this gene is 18977399

Identifier: 18977399

GI number: 18977399

Start: 982426

End: 983547

Strand: Reverse

Name: 18977399

Synonym: PF1027

Alternate gene names: NA

Gene position: 983547-982426 (Counterclockwise)

Preceding gene: 18977403

Following gene: 18977398

Centisome position: 51.54

GC content: 35.38

Gene sequence:

>1122_bases
ATGAAAGTAGAAAAATATGCGATTATCTTTGGAAAAAATCCTGAGCTTGGACTTTATGAGCTAAAGGCCTTCTCAAAGAG
GTTTAAGTTAGGGGTAAGAATATTAGAGATCCGTTTTTATGGTCCAAACAAAAGTTTTGCTATAATCCAGGCTAAAGAAG
AAATAGAAAAAAAGTTTAAGTGGTTAGGGGGAGCTTTAAAGTTAGTGAGAATTGTAGGAGAAGGCTTAGATACAATAGAG
AATCTCGAATACTCAAAATTGTTTACAGTGAGCTTATATGGGAAAGAAGATTGGAAAGCGTGGAGAAAACTTGGATCTCA
AGTTAAAGCAGTTTTTAAGAGGAAAGATTCTTCTAAATTCTTTAAACCTGCTAACGTTTATTCTATGCCTAGCGAATTAA
TTCTAAAAGGATTTCCAGAAGTCAAAGATGTGGTATTTTTGTTTGTAGATAAGGACAGAGTTCTGGTGGGGGAAACGATA
AGGATTACAAATCCCTTTGAACTTAAAAAATTGGATGTAGAGAGACCCATAGTTAGACCTACTCTTTCAATTCCCCCTAG
GCTAGCTAGGATAATGATAAATCTCTCAGAAGTTAGAAAGGGAAACGTTCTAGATCCGTTTTGTGGTACTGGAACTATTT
TAGTTGAACTCCTCCTTCAAGGTTTAATTGCATATGGGAGTGACATAAGTCAGGAAAGAATAAATGATGCAAGAAAAAAC
ATTGAATGGATCAGAAAGGAGTTTAGGATAAAACAGAACGCAAGTTTGAGGGTTTGTGACGTTAGAAGGCTAAAAAAGTG
CTTTAGAACTAGATTTGATGCTATAATTACAGAACCGTATATGGGTCGACCACTAAAAACTAAGCCAACAAGGGAGGAGG
CCATTAAAATAGCAAAACAATTGGATCGGTTATATTATCAAGCCTTTGAAAGCTTTTCTGATGTTCTTAAGAGAAATGCT
AAAGTAGTTTTCGTATTTCCCGCATTTAATTTAGCTGAGGGAGGAGTTTATAGGAGAAATAGACCCTGGTTAGAGGAACT
TGGGTTTAAGGTTGAGTATTCCATTTTAGATATTGATGAAAAGCATAGGATTGGAAGAGATATATACGTGATTAGATACT
AG

Upstream 100 bases:

>100_bases
CCTTCCCTTTCAATTGTTGTTTTTAGCCTTTTTAAAAATTCCCAGGTTGTTATAAATTTTTTAAAGGGAGATCCTAAGAT
GGTGTAAAGGGACAAAGGCT

Downstream 100 bases:

>100_bases
CAATGCTTTTATCCTACCTGGCTCATTGTTCCTGGGTGAAAGTGATATGGCTAGGATCACTGAGGAACAAAGAAGGAAGC
TTGCTCAAGATGCGTTGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MKVEKYAIIFGKNPELGLYELKAFSKRFKLGVRILEIRFYGPNKSFAIIQAKEEIEKKFKWLGGALKLVRIVGEGLDTIE
NLEYSKLFTVSLYGKEDWKAWRKLGSQVKAVFKRKDSSKFFKPANVYSMPSELILKGFPEVKDVVFLFVDKDRVLVGETI
RITNPFELKKLDVERPIVRPTLSIPPRLARIMINLSEVRKGNVLDPFCGTGTILVELLLQGLIAYGSDISQERINDARKN
IEWIRKEFRIKQNASLRVCDVRRLKKCFRTRFDAIITEPYMGRPLKTKPTREEAIKIAKQLDRLYYQAFESFSDVLKRNA
KVVFVFPAFNLAEGGVYRRNRPWLEELGFKVEYSILDIDEKHRIGRDIYVIRY

Sequences:

>Translated_373_residues
MKVEKYAIIFGKNPELGLYELKAFSKRFKLGVRILEIRFYGPNKSFAIIQAKEEIEKKFKWLGGALKLVRIVGEGLDTIE
NLEYSKLFTVSLYGKEDWKAWRKLGSQVKAVFKRKDSSKFFKPANVYSMPSELILKGFPEVKDVVFLFVDKDRVLVGETI
RITNPFELKKLDVERPIVRPTLSIPPRLARIMINLSEVRKGNVLDPFCGTGTILVELLLQGLIAYGSDISQERINDARKN
IEWIRKEFRIKQNASLRVCDVRRLKKCFRTRFDAIITEPYMGRPLKTKPTREEAIKIAKQLDRLYYQAFESFSDVLKRNA
KVVFVFPAFNLAEGGVYRRNRPWLEELGFKVEYSILDIDEKHRIGRDIYVIRY
>Mature_373_residues
MKVEKYAIIFGKNPELGLYELKAFSKRFKLGVRILEIRFYGPNKSFAIIQAKEEIEKKFKWLGGALKLVRIVGEGLDTIE
NLEYSKLFTVSLYGKEDWKAWRKLGSQVKAVFKRKDSSKFFKPANVYSMPSELILKGFPEVKDVVFLFVDKDRVLVGETI
RITNPFELKKLDVERPIVRPTLSIPPRLARIMINLSEVRKGNVLDPFCGTGTILVELLLQGLIAYGSDISQERINDARKN
IEWIRKEFRIKQNASLRVCDVRRLKKCFRTRFDAIITEPYMGRPLKTKPTREEAIKIAKQLDRLYYQAFESFSDVLKRNA
KVVFVFPAFNLAEGGVYRRNRPWLEELGFKVEYSILDIDEKHRIGRDIYVIRY

Specific function: Unknown

COG id: COG1041

COG function: function code L; Predicted DNA modification methylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 THUMP domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005885
- InterPro:   IPR002052
- InterPro:   IPR002296
- InterPro:   IPR000241
- InterPro:   IPR004114 [H]

Pfam domain/function: PF02926 THUMP; PF01170 UPF0020 [H]

EC number: NA

Molecular weight: Translated: 43522; Mature: 43522

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVEKYAIIFGKNPELGLYELKAFSKRFKLGVRILEIRFYGPNKSFAIIQAKEEIEKKFK
CCCEEEEEEECCCCCCCHHHHHHHHHHHHCCEEEEEEEEECCCCCEEEEECHHHHHHHHH
WLGGALKLVRIVGEGLDTIENLEYSKLFTVSLYGKEDWKAWRKLGSQVKAVFKRKDSSKF
HHHHHHHHHHHHHCCHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCC
FKPANVYSMPSELILKGFPEVKDVVFLFVDKDRVLVGETIRITNPFELKKLDVERPIVRP
CCCCCCCCCCHHHHHCCCCCHHEEEEEEECCCCEEECCEEEECCCCCEEEECCCCCCCCC
TLSIPPRLARIMINLSEVRKGNVLDPFCGTGTILVELLLQGLIAYGSDISQERINDARKN
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
IEWIRKEFRIKQNASLRVCDVRRLKKCFRTRFDAIITEPYMGRPLKTKPTREEAIKIAKQ
HHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
LDRLYYQAFESFSDVLKRNAKVVFVFPAFNLAEGGVYRRNRPWLEELGFKVEYSILDIDE
HHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCHHHCCCEEEEEEECCCH
KHRIGRDIYVIRY
HHCCCCEEEEEEC
>Mature Secondary Structure
MKVEKYAIIFGKNPELGLYELKAFSKRFKLGVRILEIRFYGPNKSFAIIQAKEEIEKKFK
CCCEEEEEEECCCCCCCHHHHHHHHHHHHCCEEEEEEEEECCCCCEEEEECHHHHHHHHH
WLGGALKLVRIVGEGLDTIENLEYSKLFTVSLYGKEDWKAWRKLGSQVKAVFKRKDSSKF
HHHHHHHHHHHHHCCHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCC
FKPANVYSMPSELILKGFPEVKDVVFLFVDKDRVLVGETIRITNPFELKKLDVERPIVRP
CCCCCCCCCCHHHHHCCCCCHHEEEEEEECCCCEEECCEEEECCCCCEEEECCCCCCCCC
TLSIPPRLARIMINLSEVRKGNVLDPFCGTGTILVELLLQGLIAYGSDISQERINDARKN
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
IEWIRKEFRIKQNASLRVCDVRRLKKCFRTRFDAIITEPYMGRPLKTKPTREEAIKIAKQ
HHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
LDRLYYQAFESFSDVLKRNAKVVFVFPAFNLAEGGVYRRNRPWLEELGFKVEYSILDIDE
HHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCHHHCCCEEEEEEECCCH
KHRIGRDIYVIRY
HHCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]