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The map label for this gene is 18977357

Identifier: 18977357

GI number: 18977357

Start: 940306

End: 941361

Strand: Direct

Name: 18977357

Synonym: PF0985

Alternate gene names: NA

Gene position: 940306-941361 (Clockwise)

Preceding gene: 18977353

Following gene: 18977359

Centisome position: 49.28

GC content: 39.02

Gene sequence:

>1056_bases
TTGTCAAAACCTTTATTCGTAACTCCTCCATACGTATCCACACTTCTTACACTTATAGAATATTGTACTTGGCTCATCTC
CTGCCCTAGTTTGAAGTTCCCACCACCATGCTTCATTATGCCCACATTTTGGGCAGGTTACTTTTGCTGTTGGAAGAGTC
GAAACTTCTTGTTCAATTACAACTACTCCTTCATCAGGCCTATGCTTGACTTCTTCTGTTCTTCTATATGCTTTGGTGTC
CTCAGGATTTATAGGTTCCTCATAACCACATTTTCTACAGACAAAGACTCCTCTCCTCCTGTCGGGTATCATAATACTCC
CACATTTGGGGCAGAATTTCACCATTTATCTCACCCCCATACTAGCCAAGGGCAAAGTTTAATCGTTCAAAATAAAAAGT
TTACCTTACACCATTCTTTGGAGGGAAGGTGTATGAAGATTAGTAAGATAATAGAGCAAATAAAATCTGAGCTCGATAAA
AAAGATAAGCTAAGAGAAGAGGCATTAGAAATTACTAGGGACATAATAAGACTAAGTGGTGATGCTATAAAGGCAATGCA
TAGGGGAGAATTAGAATTAGCTCACGAAAGACTTGAAAAAGCTAGGGGGCTCGTAAAAGAATTAAAAGAAAAGTTGAGAG
AGCATCCAGATCTTTACTATACAGGATACGTCCAGAATGCGAACCAAGAATTCGTTGAAGCTGTTCTAATGTACCACTAT
CTCACAGATAGGGAATTTCCAAGCCACGTCGACCTGGGAGTTCCTTCCCAGGATTACATTTTGGGAGTTGGGGACTTCAT
AGGAGAGTTAAGACGATATTTCTTGATAAATCTAATGAAAGGAAATCTTGACGAAGCAGAGAGCACTTACAGATTTATGG
AAGAAGTCTATGAAGAACTAATGACACTCGAATATCCAAAAGGTCTAGTTAATATAAGGCAAAAGCAAGATCAGGCGAGG
TACACCTTGGAAAGAACTCTTGAAGATCTAACAAGAGCAAAAGTTAACAGAAGGGTTGAAGAAAAACTGGAGGCTTTTTT
GAATGATAGATCTTAG

Upstream 100 bases:

>100_bases
ACTCTTTCTTTACCCCTCAATAAATAAGTTTTTCCATTGTCTGTATCGGGTATTCTTTTATAAGCTTCCTCTAGCTCCTT
CAAAGCTTTCTCTGCTAATC

Downstream 100 bases:

>100_bases
AAAACTGACGGAAGTGCAGCGAAGGCTTAGTAGGAAAATAGTGGAAAAACCAATAGATATAGCGAAAGTGAAGAGAGTTG
GAGCCGTGGACGTCTCTTAT

Product: haloacid dehalogenase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 350

Protein sequence:

>351_residues
MSKPLFVTPPYVSTLLTLIEYCTWLISCPSLKFPPPCFIMPTFWAGYFCCWKSRNFLFNYNYSFIRPMLDFFCSSICFGV
LRIYRFLITTFSTDKDSSPPVGYHNTPTFGAEFHHLSHPHTSQGQSLIVQNKKFTLHHSLEGRCMKISKIIEQIKSELDK
KDKLREEALEITRDIIRLSGDAIKAMHRGELELAHERLEKARGLVKELKEKLREHPDLYYTGYVQNANQEFVEAVLMYHY
LTDREFPSHVDLGVPSQDYILGVGDFIGELRRYFLINLMKGNLDEAESTYRFMEEVYEELMTLEYPKGLVNIRQKQDQAR
YTLERTLEDLTRAKVNRRVEEKLEAFLNDRS

Sequences:

>Translated_351_residues
MSKPLFVTPPYVSTLLTLIEYCTWLISCPSLKFPPPCFIMPTFWAGYFCCWKSRNFLFNYNYSFIRPMLDFFCSSICFGV
LRIYRFLITTFSTDKDSSPPVGYHNTPTFGAEFHHLSHPHTSQGQSLIVQNKKFTLHHSLEGRCMKISKIIEQIKSELDK
KDKLREEALEITRDIIRLSGDAIKAMHRGELELAHERLEKARGLVKELKEKLREHPDLYYTGYVQNANQEFVEAVLMYHY
LTDREFPSHVDLGVPSQDYILGVGDFIGELRRYFLINLMKGNLDEAESTYRFMEEVYEELMTLEYPKGLVNIRQKQDQAR
YTLERTLEDLTRAKVNRRVEEKLEAFLNDRS
>Mature_350_residues
SKPLFVTPPYVSTLLTLIEYCTWLISCPSLKFPPPCFIMPTFWAGYFCCWKSRNFLFNYNYSFIRPMLDFFCSSICFGVL
RIYRFLITTFSTDKDSSPPVGYHNTPTFGAEFHHLSHPHTSQGQSLIVQNKKFTLHHSLEGRCMKISKIIEQIKSELDKK
DKLREEALEITRDIIRLSGDAIKAMHRGELELAHERLEKARGLVKELKEKLREHPDLYYTGYVQNANQEFVEAVLMYHYL
TDREFPSHVDLGVPSQDYILGVGDFIGELRRYFLINLMKGNLDEAESTYRFMEEVYEELMTLEYPKGLVNIRQKQDQARY
TLERTLEDLTRAKVNRRVEEKLEAFLNDRS

Specific function: Unknown

COG id: COG2178

COG function: function code J; Predicted RNA-binding protein of the translin family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002848
- InterPro:   IPR016069
- InterPro:   IPR016068 [H]

Pfam domain/function: PF01997 Translin [H]

EC number: NA

Molecular weight: Translated: 41225; Mature: 41094

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKPLFVTPPYVSTLLTLIEYCTWLISCPSLKFPPPCFIMPTFWAGYFCCWKSRNFLFNY
CCCCCEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECHHHHHHHHHHCCCCCEEEEC
NYSFIRPMLDFFCSSICFGVLRIYRFLITTFSTDKDSSPPVGYHNTPTFGAEFHHLSHPH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCC
TSQGQSLIVQNKKFTLHHSLEGRCMKISKIIEQIKSELDKKDKLREEALEITRDIIRLSG
CCCCCEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DAIKAMHRGELELAHERLEKARGLVKELKEKLREHPDLYYTGYVQNANQEFVEAVLMYHY
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHH
LTDREFPSHVDLGVPSQDYILGVGDFIGELRRYFLINLMKGNLDEAESTYRFMEEVYEEL
HHCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
MTLEYPKGLVNIRQKQDQARYTLERTLEDLTRAKVNRRVEEKLEAFLNDRS
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SKPLFVTPPYVSTLLTLIEYCTWLISCPSLKFPPPCFIMPTFWAGYFCCWKSRNFLFNY
CCCCEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECHHHHHHHHHHCCCCCEEEEC
NYSFIRPMLDFFCSSICFGVLRIYRFLITTFSTDKDSSPPVGYHNTPTFGAEFHHLSHPH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCC
TSQGQSLIVQNKKFTLHHSLEGRCMKISKIIEQIKSELDKKDKLREEALEITRDIIRLSG
CCCCCEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DAIKAMHRGELELAHERLEKARGLVKELKEKLREHPDLYYTGYVQNANQEFVEAVLMYHY
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHH
LTDREFPSHVDLGVPSQDYILGVGDFIGELRRYFLINLMKGNLDEAESTYRFMEEVYEEL
HHCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
MTLEYPKGLVNIRQKQDQARYTLERTLEDLTRAKVNRRVEEKLEAFLNDRS
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]