| Definition | Pyrococcus furiosus DSM 3638, complete genome. |
|---|---|
| Accession | NC_003413 |
| Length | 1,908,256 |
Click here to switch to the map view.
The map label for this gene is f1pep1 [H]
Identifier: 18977197
GI number: 18977197
Start: 803543
End: 805393
Strand: Reverse
Name: f1pep1 [H]
Synonym: PF0825
Alternate gene names: 18977197
Gene position: 805393-803543 (Counterclockwise)
Preceding gene: 18977198
Following gene: 18977193
Centisome position: 42.21
GC content: 45.76
Gene sequence:
>1851_bases ATGGAAGATCCCTACATATGGATGGAAAACCTCGAGGATGAAAGGGTTCTGAAAATAATTGAAGAAGAAAACAAGAGGTT TAGGGAGTTTATTGGTGAGCTAAGCGACAAGCTGTTCCCCGAGGTATGGGAACAATTTTCCCAACCCACAATTGGAATGG CAAGGATAACCAAGAAAGGAATAATAGCTTCATACAGCGAGAAAGATAGAGTTGTGATAAAGTGGTTCAATGGTGATGTT ATAGTTGATTCCAAGGAATTGGAAAGAGAAGTTGGAGATGAAGTTCTTCTCCAGGGATTCACAACGGATGAAGAGGGAGA AAAGCTCGCCTATAGCTTTTCCATTGGAGGGGCGGATGAGGGAATAACGAGGATAATAGACCTCAAAACTGGGGAAGTCA TAGAGGAGATAAAGCCCTCCATATGGAACATAACCTTCCTAAAGGACGGCTACTACTTCACAAGGTTTTACAGAAAGGAG AAGACTCCCGATGGGGTTAATCCTCCAGCCGCAAGAATGTTCTGGAAGGACAGAGAAGGGGAGAGGATGGTCTTTGGAGA AGGGCTAACATCGGGATACTTCATGAGCATTAGAAAAAGTTCCGACGGAAAGTTTGCGATTGTGACCCTAACTTATGGAT GGAATCAAGGCGAGGTATACATCGGACCAATTGACAACCCCCAGGAATGGAAGAAGGTGTACTCTGCAAGTGTTCCAGTG GAGGCGATAGATGTTGTCAATGGAAAGCTGTACATCCTCACCAAGGAAGGGAAAGGGCTAGGAAAAATAATTGCCATAAA AAATGGGAAAATAGATGAGGTTATACCAGAGGGGGAGTTTCCGCTAGAGTGGGCTGTGATAGTGAGGGATAAGATATTGG CTGGAAGGCTCGTCCACGCGAGCTATAAGCTTGAGGTATACACTTTAAACGGCGAAAAGATTAAAGAAATCACCTTCGAC GTTCCAGGAAGCTTGTATCCCTTGGACAAGGATGAAGAGAGAGTTCTTCTTAGATACACAAGCTTTACCATCCCATATAG GCTCTACGAGTTCAAGGACGATTTAAGGCTGATTGAGGAGAGAAAAGTTGAGGGGGAGTTCAGAGTTGAGGAAGACTTTG CCACAAGCAAGGACGGGACAAAGGTTCACTACTTCATAGTGAAGGGAGAGAGGGATGAAAAGAGGGCCTGGGTATTTGGC TACGGTGGATTCAACATCGCTCTAACTCCAATGTTCTTCCCTCAAGTGATACCATTCCTCAAGAGAGGAGGAACATTCAT CATGGCCAACTTAAGGGGAGGAAGCGAGTATGGTGAGGAGTGGCATAGGGCTGGAATGAGAGAGAACAAGCAGAATGTCT TCGATGACTTCATAGCAGTCCTTGAAAAGCTAAAGAAAGAAGGCTATAAGGTAGCTGCATGGGGAAGGAGCAACGGTGGC CTCTTGGTTTCAGCAACATTAACTCAAAGACCCGACGTTATGGATTCCGCATTGATAGGGTACCCAGTGATTGACATGTT GAGGTTCCACAAGCTCTATATTGGTAGCGTTTGGATTCCAGAATACGGAAATCCAGAAGATCCAAAAGATAGGGAGTTCC TCCTGAAGTACTCTCCCTATCACAACGTTGATCCTAAAAAGAAGTACCCACCAACGCTAATCTACACTGGCCTCCACGAT GACAGGGTTCACCCGGCACATGCCCTCAAGTTCTTCATGAAGCTGAAGGAAATAGGTGCCCCGGTTTATCTAAGAGTTGA GACGAAGAGTGGTCATATGGGCGCTTCTCCAGAGACAAGAGCCAGGGAGCTCACAGATCTCCTGGCCTTTGTTCTCAAGA CCCTTTCCTGA
Upstream 100 bases:
>100_bases TACTCTTCGTTCCGATCTCATATCTTTTAGCCGCAACTCTAATTTTCCTGGACGAAAAACTTCATTAACCCTACCTTTCA ACGCTAAGATGGTGATCTCT
Downstream 100 bases:
>100_bases TATCCTCTTCTATTATTCTTTTCATCCACGTACCCTTCATGAACCACATGAGCGCTATTGTTGCCGCTAAAAAGTTGCTC ATGCCCATGCCAAAGAACAC
Product: prolyl endopeptidase
Products: NA
Alternate protein names: Post-proline cleaving enzyme; Proline-specific endopeptidase; PE; PSE [H]
Number of amino acids: Translated: 616; Mature: 616
Protein sequence:
>616_residues MEDPYIWMENLEDERVLKIIEEENKRFREFIGELSDKLFPEVWEQFSQPTIGMARITKKGIIASYSEKDRVVIKWFNGDV IVDSKELEREVGDEVLLQGFTTDEEGEKLAYSFSIGGADEGITRIIDLKTGEVIEEIKPSIWNITFLKDGYYFTRFYRKE KTPDGVNPPAARMFWKDREGERMVFGEGLTSGYFMSIRKSSDGKFAIVTLTYGWNQGEVYIGPIDNPQEWKKVYSASVPV EAIDVVNGKLYILTKEGKGLGKIIAIKNGKIDEVIPEGEFPLEWAVIVRDKILAGRLVHASYKLEVYTLNGEKIKEITFD VPGSLYPLDKDEERVLLRYTSFTIPYRLYEFKDDLRLIEERKVEGEFRVEEDFATSKDGTKVHYFIVKGERDEKRAWVFG YGGFNIALTPMFFPQVIPFLKRGGTFIMANLRGGSEYGEEWHRAGMRENKQNVFDDFIAVLEKLKKEGYKVAAWGRSNGG LLVSATLTQRPDVMDSALIGYPVIDMLRFHKLYIGSVWIPEYGNPEDPKDREFLLKYSPYHNVDPKKKYPPTLIYTGLHD DRVHPAHALKFFMKLKEIGAPVYLRVETKSGHMGASPETRARELTDLLAFVLKTLS
Sequences:
>Translated_616_residues MEDPYIWMENLEDERVLKIIEEENKRFREFIGELSDKLFPEVWEQFSQPTIGMARITKKGIIASYSEKDRVVIKWFNGDV IVDSKELEREVGDEVLLQGFTTDEEGEKLAYSFSIGGADEGITRIIDLKTGEVIEEIKPSIWNITFLKDGYYFTRFYRKE KTPDGVNPPAARMFWKDREGERMVFGEGLTSGYFMSIRKSSDGKFAIVTLTYGWNQGEVYIGPIDNPQEWKKVYSASVPV EAIDVVNGKLYILTKEGKGLGKIIAIKNGKIDEVIPEGEFPLEWAVIVRDKILAGRLVHASYKLEVYTLNGEKIKEITFD VPGSLYPLDKDEERVLLRYTSFTIPYRLYEFKDDLRLIEERKVEGEFRVEEDFATSKDGTKVHYFIVKGERDEKRAWVFG YGGFNIALTPMFFPQVIPFLKRGGTFIMANLRGGSEYGEEWHRAGMRENKQNVFDDFIAVLEKLKKEGYKVAAWGRSNGG LLVSATLTQRPDVMDSALIGYPVIDMLRFHKLYIGSVWIPEYGNPEDPKDREFLLKYSPYHNVDPKKKYPPTLIYTGLHD DRVHPAHALKFFMKLKEIGAPVYLRVETKSGHMGASPETRARELTDLLAFVLKTLS >Mature_616_residues MEDPYIWMENLEDERVLKIIEEENKRFREFIGELSDKLFPEVWEQFSQPTIGMARITKKGIIASYSEKDRVVIKWFNGDV IVDSKELEREVGDEVLLQGFTTDEEGEKLAYSFSIGGADEGITRIIDLKTGEVIEEIKPSIWNITFLKDGYYFTRFYRKE KTPDGVNPPAARMFWKDREGERMVFGEGLTSGYFMSIRKSSDGKFAIVTLTYGWNQGEVYIGPIDNPQEWKKVYSASVPV EAIDVVNGKLYILTKEGKGLGKIIAIKNGKIDEVIPEGEFPLEWAVIVRDKILAGRLVHASYKLEVYTLNGEKIKEITFD VPGSLYPLDKDEERVLLRYTSFTIPYRLYEFKDDLRLIEERKVEGEFRVEEDFATSKDGTKVHYFIVKGERDEKRAWVFG YGGFNIALTPMFFPQVIPFLKRGGTFIMANLRGGSEYGEEWHRAGMRENKQNVFDDFIAVLEKLKKEGYKVAAWGRSNGG LLVSATLTQRPDVMDSALIGYPVIDMLRFHKLYIGSVWIPEYGNPEDPKDREFLLKYSPYHNVDPKKKYPPTLIYTGLHD DRVHPAHALKFFMKLKEIGAPVYLRVETKSGHMGASPETRARELTDLLAFVLKTLS
Specific function: Cleaves peptide bonds on the C-terminal side of prolyl residues within peptides that are up to approximately 30 amino acids long. Has an absolute requirement for an X-Pro bond in the trans configuration immediately preceding the Pro-Y scissible bond [H]
COG id: COG1505
COG function: function code E; Serine proteases of the peptidase family S9A
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S9A family [H]
Homologues:
Organism=Homo sapiens, GI41349456, Length=689, Percent_Identity=30.188679245283, Blast_Score=241, Evalue=1e-63, Organism=Homo sapiens, GI108860686, Length=353, Percent_Identity=26.628895184136, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI284172438, Length=219, Percent_Identity=27.8538812785388, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI284172431, Length=219, Percent_Identity=27.8538812785388, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI284172420, Length=219, Percent_Identity=27.8538812785388, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI284172413, Length=219, Percent_Identity=27.8538812785388, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI70778815, Length=219, Percent_Identity=27.8538812785388, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI108860692, Length=196, Percent_Identity=27.5510204081633, Blast_Score=69, Evalue=9e-12, Organism=Escherichia coli, GI1788150, Length=679, Percent_Identity=23.7113402061856, Blast_Score=129, Evalue=4e-31, Organism=Drosophila melanogaster, GI24583414, Length=693, Percent_Identity=30.3030303030303, Blast_Score=232, Evalue=6e-61, Organism=Drosophila melanogaster, GI221510989, Length=582, Percent_Identity=32.1305841924399, Blast_Score=224, Evalue=1e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002471 - InterPro: IPR001375 - InterPro: IPR002470 - InterPro: IPR004106 [H]
Pfam domain/function: PF00326 Peptidase_S9; PF02897 Peptidase_S9_N [H]
EC number: =3.4.21.26 [H]
Molecular weight: Translated: 70825; Mature: 70825
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDPYIWMENLEDERVLKIIEEENKRFREFIGELSDKLFPEVWEQFSQPTIGMARITKKG CCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCC IIASYSEKDRVVIKWFNGDVIVDSKELEREVGDEVLLQGFTTDEEGEKLAYSFSIGGADE CEEECCCCCEEEEEEECCCEEEEHHHHHHHCCCHHEEECCCCCCCCCEEEEEEECCCCCC GITRIIDLKTGEVIEEIKPSIWNITFLKDGYYFTRFYRKEKTPDGVNPPAARMFWKDREG CCEEEEECCCHHHHHHCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCHHHHEECCCCC ERMVFGEGLTSGYFMSIRKSSDGKFAIVTLTYGWNQGEVYIGPIDNPQEWKKVYSASVPV CEEEEECCCCCCEEEEEEECCCCCEEEEEEEEECCCCEEEECCCCCHHHHHHHHCCCCCE EAIDVVNGKLYILTKEGKGLGKIIAIKNGKIDEVIPEGEFPLEWAVIVRDKILAGRLVHA EEEEECCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEHHHHHHCEEEEE SYKLEVYTLNGEKIKEITFDVPGSLYPLDKDEERVLLRYTSFTIPYRLYEFKDDLRLIEE EEEEEEEEECCCEEEEEEEECCCCCCCCCCCCCEEEEEEEEEECCEEEEHHHHHHHHHHH RKVEGEFRVEEDFATSKDGTKVHYFIVKGERDEKRAWVFGYGGFNIALTPMFFPQVIPFL HCCCCCEEEECCCCCCCCCCEEEEEEEECCCCCCEEEEEEECCCEEEECHHHHHHHHHHH KRGGTFIMANLRGGSEYGEEWHRAGMRENKQNVFDDFIAVLEKLKKEGYKVAAWGRSNGG HCCCEEEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC LLVSATLTQRPDVMDSALIGYPVIDMLRFHKLYIGSVWIPEYGNPEDPKDREFLLKYSPY EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCEEEEEECCC HNVDPKKKYPPTLIYTGLHDDRVHPAHALKFFMKLKEIGAPVYLRVETKSGHMGASPETR CCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHH ARELTDLLAFVLKTLS HHHHHHHHHHHHHHCC >Mature Secondary Structure MEDPYIWMENLEDERVLKIIEEENKRFREFIGELSDKLFPEVWEQFSQPTIGMARITKKG CCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCC IIASYSEKDRVVIKWFNGDVIVDSKELEREVGDEVLLQGFTTDEEGEKLAYSFSIGGADE CEEECCCCCEEEEEEECCCEEEEHHHHHHHCCCHHEEECCCCCCCCCEEEEEEECCCCCC GITRIIDLKTGEVIEEIKPSIWNITFLKDGYYFTRFYRKEKTPDGVNPPAARMFWKDREG CCEEEEECCCHHHHHHCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCHHHHEECCCCC ERMVFGEGLTSGYFMSIRKSSDGKFAIVTLTYGWNQGEVYIGPIDNPQEWKKVYSASVPV CEEEEECCCCCCEEEEEEECCCCCEEEEEEEEECCCCEEEECCCCCHHHHHHHHCCCCCE EAIDVVNGKLYILTKEGKGLGKIIAIKNGKIDEVIPEGEFPLEWAVIVRDKILAGRLVHA EEEEECCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEHHHHHHCEEEEE SYKLEVYTLNGEKIKEITFDVPGSLYPLDKDEERVLLRYTSFTIPYRLYEFKDDLRLIEE EEEEEEEEECCCEEEEEEEECCCCCCCCCCCCCEEEEEEEEEECCEEEEHHHHHHHHHHH RKVEGEFRVEEDFATSKDGTKVHYFIVKGERDEKRAWVFGYGGFNIALTPMFFPQVIPFL HCCCCCEEEECCCCCCCCCCEEEEEEEECCCCCCEEEEEEECCCEEEECHHHHHHHHHHH KRGGTFIMANLRGGSEYGEEWHRAGMRENKQNVFDDFIAVLEKLKKEGYKVAAWGRSNGG HCCCEEEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC LLVSATLTQRPDVMDSALIGYPVIDMLRFHKLYIGSVWIPEYGNPEDPKDREFLLKYSPY EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCEEEEEECCC HNVDPKKKYPPTLIYTGLHDDRVHPAHALKFFMKLKEIGAPVYLRVETKSGHMGASPETR CCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHH ARELTDLLAFVLKTLS HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1840588; 7764331 [H]