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The map label for this gene is secF [C]

Identifier: 18976545

GI number: 18976545

Start: 182599

End: 183489

Strand: Direct

Name: secF [C]

Synonym: PF0173

Alternate gene names: 18976545

Gene position: 182599-183489 (Clockwise)

Preceding gene: 18976542

Following gene: 18976546

Centisome position: 9.57

GC content: 39.51

Gene sequence:

>891_bases
GTGCCAGAGGTGGACAATGTGATAAAAGAGAAGTTAAAACTTCTTGTGGAGATGGATCCAAAGAAGATGATAATATACCC
ATTAATTGTTTTTGGAATTGCCATAATCATTATCATTGCAAACTATGTAATGACAGGTAGCTTTGTCAAAGAGGGAATAG
AGCTAAGAGGAGGGTCGGTAATAACCCTCCAAGGGGTAAACGTTAGTCCTGACGAAATAGCGAAAAGTATCAAAGAAAAA
ACAGGAATTGATGTTACAGTAGAAAAATTTAGTGGTGTTGGTGGGAGCGGGGTTAGGGTTTATGTATCTGCGGGGGATGA
TGTCAATTTAGTCAGAGAAGCTTTGAAAGAAATGTTTCCCGATGTGGAGCCTCAGACTGTAGTTATTGGGCCTACTTTTG
GAGAAATAGTGAGGGAGCAGGGAATAAAGGCTATAGTTTATGCTTTCATAGGGATGGCTATTGTTGTTTTCCTGTTCTTT
AGAGTTCCCGTCCCATCTATGACTGTTGTATTCTCTGCCTTCTCTGATATGATTATAGCCATAGCTTTAATGAACATTTT
TGGAATAGAGCTCAGTCAAGCTACTATAGCTGCTTTATTAATGTTAATTGGTTATTCGGTTGATAGTAATATATTGCTAA
CGACAAGACTACTCAGGAGGAAGGAGTTTACCGTAGAGGAGGCTTATTACTCCTCCCTAAAAACAGGCTTTACGATGAGC
ACTACAACCCTGGGAGCTTTGGCATCGCTGTGGATATTCTCAACAGCTCAGGTAATTGATGATATAGCTTCAGTTCTCAT
ATTTGGATTGCTTGCTGACTTTATGAACACTTGGATTTTAAATGCAGGAGTTTTGCGTTTATACATAGCTAAGAGGGAGG
GTAAGGAATGA

Upstream 100 bases:

>100_bases
TTTTTCTCGCGAATTTATAGGGCCTCTATAGTATTTAAATACTTTTGTGAGTTTGCTGATAAGTGACCAAAATACATTTA
ATGGAAAATGTAAAATGTGA

Downstream 100 bases:

>100_bases
AGTGGAGGAGAATTTTACTTAATTTTAGGGTCATTGTTCTCATATTCTTCCTCTTGATCTCAATAACAGCCCTAGCTACG
AGAGGTTTAACTTTTGGTTT

Product: preprotein translocase subunit SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MPEVDNVIKEKLKLLVEMDPKKMIIYPLIVFGIAIIIIIANYVMTGSFVKEGIELRGGSVITLQGVNVSPDEIAKSIKEK
TGIDVTVEKFSGVGGSGVRVYVSAGDDVNLVREALKEMFPDVEPQTVVIGPTFGEIVREQGIKAIVYAFIGMAIVVFLFF
RVPVPSMTVVFSAFSDMIIAIALMNIFGIELSQATIAALLMLIGYSVDSNILLTTRLLRRKEFTVEEAYYSSLKTGFTMS
TTTLGALASLWIFSTAQVIDDIASVLIFGLLADFMNTWILNAGVLRLYIAKREGKE

Sequences:

>Translated_296_residues
MPEVDNVIKEKLKLLVEMDPKKMIIYPLIVFGIAIIIIIANYVMTGSFVKEGIELRGGSVITLQGVNVSPDEIAKSIKEK
TGIDVTVEKFSGVGGSGVRVYVSAGDDVNLVREALKEMFPDVEPQTVVIGPTFGEIVREQGIKAIVYAFIGMAIVVFLFF
RVPVPSMTVVFSAFSDMIIAIALMNIFGIELSQATIAALLMLIGYSVDSNILLTTRLLRRKEFTVEEAYYSSLKTGFTMS
TTTLGALASLWIFSTAQVIDDIASVLIFGLLADFMNTWILNAGVLRLYIAKREGKE
>Mature_295_residues
PEVDNVIKEKLKLLVEMDPKKMIIYPLIVFGIAIIIIIANYVMTGSFVKEGIELRGGSVITLQGVNVSPDEIAKSIKEKT
GIDVTVEKFSGVGGSGVRVYVSAGDDVNLVREALKEMFPDVEPQTVVIGPTFGEIVREQGIKAIVYAFIGMAIVVFLFFR
VPVPSMTVVFSAFSDMIIAIALMNIFGIELSQATIAALLMLIGYSVDSNILLTTRLLRRKEFTVEEAYYSSLKTGFTMST
TTLGALASLWIFSTAQVIDDIASVLIFGLLADFMNTWILNAGVLRLYIAKREGKE

Specific function: Involved In Protein Export. [C]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813 [H]

Pfam domain/function: PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 32398; Mature: 32267

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEVDNVIKEKLKLLVEMDPKKMIIYPLIVFGIAIIIIIANYVMTGSFVKEGIELRGGSV
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
ITLQGVNVSPDEIAKSIKEKTGIDVTVEKFSGVGGSGVRVYVSAGDDVNLVREALKEMFP
EEEECCCCCHHHHHHHHHHHCCCEEEEHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHCC
DVEPQTVVIGPTFGEIVREQGIKAIVYAFIGMAIVVFLFFRVPVPSMTVVFSAFSDMIIA
CCCCCEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
IALMNIFGIELSQATIAALLMLIGYSVDSNILLTTRLLRRKEFTVEEAYYSSLKTGFTMS
HHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEH
TTTLGALASLWIFSTAQVIDDIASVLIFGLLADFMNTWILNAGVLRLYIAKREGKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCC
>Mature Secondary Structure 
PEVDNVIKEKLKLLVEMDPKKMIIYPLIVFGIAIIIIIANYVMTGSFVKEGIELRGGSV
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
ITLQGVNVSPDEIAKSIKEKTGIDVTVEKFSGVGGSGVRVYVSAGDDVNLVREALKEMFP
EEEECCCCCHHHHHHHHHHHCCCEEEEHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHCC
DVEPQTVVIGPTFGEIVREQGIKAIVYAFIGMAIVVFLFFRVPVPSMTVVFSAFSDMIIA
CCCCCEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
IALMNIFGIELSQATIAALLMLIGYSVDSNILLTTRLLRRKEFTVEEAYYSSLKTGFTMS
HHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEH
TTTLGALASLWIFSTAQVIDDIASVLIFGLLADFMNTWILNAGVLRLYIAKREGKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]