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The map label for this gene is 18976542

Identifier: 18976542

GI number: 18976542

Start: 179807

End: 180805

Strand: Direct

Name: 18976542

Synonym: PF0170

Alternate gene names: NA

Gene position: 179807-180805 (Clockwise)

Preceding gene: 18976541

Following gene: 18976545

Centisome position: 9.42

GC content: 38.44

Gene sequence:

>999_bases
ATGAAGATAAAGAAGAGATATGTAACTGTGGTAGCGGGGATTGGATTATTGGGAGTTCTTCTTTGGTGGGCAGGAATTAG
AGAAACTCTAACATTGCTCTTTTCTGCTGATCTTAATTACCTGGGAATTGCCTTCTTGATGTATTGCCTTTCCGTTCTTG
TTTGGGCCGTGAGGTGGAGAATTTTTTTGGAGAAGGCGAATATTAAAGTTCCGTTCATTCGAATTCTTGGCGGTATTTTT
GTTGGAATATTTGTCAACAACTTAACCCCTGGAGCTAGGACTGGAGGAGAACCCGTGAAGGCCTTTTATATAACTAGAGG
TATGGGAAAGAATGAGAGTTATCCTAGGGTTTTAGCTACAGTAATGGCCGATAGAATTTTGGATGTCATTCCAGTAATGG
CTTTCATGGTTGTTGCTCTTCTCTATGCTCTAAAACTTAGGGAAAATATCTTAGTTGCTGTATTAGCCTTTTCCTCCCTT
CTTATCATGTTAATACTCGCTATAACTCTTATATTTTCCCTAAAAGAAAGATATGCGCTGGTTATTATAATGAAAATTGT
GGGGATTTTCAAGAGAATTTTCCCAAAAAAACTTGGGGATGGGGAAATTGTGGAAGCAAAAGTTAGATCTGCTATACGGG
AATTTAAGGAAACATTATTAGGAATCGCCAATAAGCGAAAGGATGTTATAATTCCCTTACTTTGGAGCTTTCTGCTTTGG
AGTTTGGATATCCTTAGGACTTATTTTGTGTTTTTAAGCATAGGGTGGAGAGTTTCCTTAGTTAAGGTTTTATTGGTAAA
AATGGCTTCAATGGCCATGGCCATGATTAGTATAGTCCCAGGGGGAATTGGAGTTAGCGAGGTTGTTCAGTCTGCCCTTT
TCCTAGTAGTTGGGATTGAAAAAAGTGTTGCAGTATCTGCAATTCTTTTGGATAGGTTGATTTCGTTTTGGTTTCCCACC
CTCATTGGAGGAATTCTTCTAATTAAAGAAAGAGTTTAG

Upstream 100 bases:

>100_bases
GTTCTCCTGGAATAGGAATTGATGAGGTTCAGAGATTCTACCCACACAAACATCTAACTCAGGGGTTCTTTATTGCAAAG
TTAAGAAAGGTGAGAGAAAT

Downstream 100 bases:

>100_bases
AGGGTTTGAAATTCTCTCTTTAAAAGTGTGAGCTGTTGTTCGTTAAATGTTTCTGGCTTTACCACTATAATCAACGTAGC
TCCTCTAATGAGTAAGTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MKIKKRYVTVVAGIGLLGVLLWWAGIRETLTLLFSADLNYLGIAFLMYCLSVLVWAVRWRIFLEKANIKVPFIRILGGIF
VGIFVNNLTPGARTGGEPVKAFYITRGMGKNESYPRVLATVMADRILDVIPVMAFMVVALLYALKLRENILVAVLAFSSL
LIMLILAITLIFSLKERYALVIIMKIVGIFKRIFPKKLGDGEIVEAKVRSAIREFKETLLGIANKRKDVIIPLLWSFLLW
SLDILRTYFVFLSIGWRVSLVKVLLVKMASMAMAMISIVPGGIGVSEVVQSALFLVVGIEKSVAVSAILLDRLISFWFPT
LIGGILLIKERV

Sequences:

>Translated_332_residues
MKIKKRYVTVVAGIGLLGVLLWWAGIRETLTLLFSADLNYLGIAFLMYCLSVLVWAVRWRIFLEKANIKVPFIRILGGIF
VGIFVNNLTPGARTGGEPVKAFYITRGMGKNESYPRVLATVMADRILDVIPVMAFMVVALLYALKLRENILVAVLAFSSL
LIMLILAITLIFSLKERYALVIIMKIVGIFKRIFPKKLGDGEIVEAKVRSAIREFKETLLGIANKRKDVIIPLLWSFLLW
SLDILRTYFVFLSIGWRVSLVKVLLVKMASMAMAMISIVPGGIGVSEVVQSALFLVVGIEKSVAVSAILLDRLISFWFPT
LIGGILLIKERV
>Mature_332_residues
MKIKKRYVTVVAGIGLLGVLLWWAGIRETLTLLFSADLNYLGIAFLMYCLSVLVWAVRWRIFLEKANIKVPFIRILGGIF
VGIFVNNLTPGARTGGEPVKAFYITRGMGKNESYPRVLATVMADRILDVIPVMAFMVVALLYALKLRENILVAVLAFSSL
LIMLILAITLIFSLKERYALVIIMKIVGIFKRIFPKKLGDGEIVEAKVRSAIREFKETLLGIANKRKDVIIPLLWSFLLW
SLDILRTYFVFLSIGWRVSLVKVLLVKMASMAMAMISIVPGGIGVSEVVQSALFLVVGIEKSVAVSAILLDRLISFWFPT
LIGGILLIKERV

Specific function: Unknown

COG id: COG0392

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0104 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022791
- InterPro:   IPR005242 [H]

Pfam domain/function: PF03706 UPF0104 [H]

EC number: NA

Molecular weight: Translated: 37080; Mature: 37080

Theoretical pI: Translated: 10.83; Mature: 10.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKKRYVTVVAGIGLLGVLLWWAGIRETLTLLFSADLNYLGIAFLMYCLSVLVWAVRWR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
IFLEKANIKVPFIRILGGIFVGIFVNNLTPGARTGGEPVKAFYITRGMGKNESYPRVLAT
HHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEEECCCCCCCCHHHHHHH
VMADRILDVIPVMAFMVVALLYALKLRENILVAVLAFSSLLIMLILAITLIFSLKERYAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIIMKIVGIFKRIFPKKLGDGEIVEAKVRSAIREFKETLLGIANKRKDVIIPLLWSFLLW
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
SLDILRTYFVFLSIGWRVSLVKVLLVKMASMAMAMISIVPGGIGVSEVVQSALFLVVGIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC
KSVAVSAILLDRLISFWFPTLIGGILLIKERV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKIKKRYVTVVAGIGLLGVLLWWAGIRETLTLLFSADLNYLGIAFLMYCLSVLVWAVRWR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
IFLEKANIKVPFIRILGGIFVGIFVNNLTPGARTGGEPVKAFYITRGMGKNESYPRVLAT
HHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEEECCCCCCCCHHHHHHH
VMADRILDVIPVMAFMVVALLYALKLRENILVAVLAFSSLLIMLILAITLIFSLKERYAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIIMKIVGIFKRIFPKKLGDGEIVEAKVRSAIREFKETLLGIANKRKDVIIPLLWSFLLW
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
SLDILRTYFVFLSIGWRVSLVKVLLVKMASMAMAMISIVPGGIGVSEVVQSALFLVVGIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC
KSVAVSAILLDRLISFWFPTLIGGILLIKERV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]