Click here to switch to the map view.

The map label for this gene is yrhO [H]

Identifier: 18976496

GI number: 18976496

Start: 129706

End: 130731

Strand: Direct

Name: yrhO [H]

Synonym: PF0124

Alternate gene names: 18976496

Gene position: 129706-130731 (Clockwise)

Preceding gene: 18976492

Following gene: 18976498

Centisome position: 6.8

GC content: 36.65

Gene sequence:

>1026_bases
ATGCTTGAAGAGGAGATATTACAAAAGCTCCAAAAATTTGGGTTAACTAAGTATGAGAGTCTTGCTTATTTGACCCTTCT
AAAACTTGGCCCCAGCAAGGCTACAGATGTTACGAAAGAAAGTGGAATACCTCACACGAGAATCTACGATGTTCTAAGCT
CTCTTGCTAGGAAGGGTTTTGTTGACATAGTGCATGGAACTCCAAGACTTTATGCTCCAGTAAATCCAGAAATAGTTCTT
GAAAAAATCAGGGAAGATTTGATCTCAGATATAGAGAGATTAAAGAAAGCTTTTCAGGAGCTATACCGGGAAGTCCATGG
TGAGGAATTGCCCGAGATATGGACCGTTCATGGGTTTGAAAATACAATAGATAGAGCTCAACATATAATCAGATCTGCAA
AGCATGATATCTTGATCAATACTCCATATGAGTTTCTTGAATATCTAAGGGGAGTATTAGAAAAAAGAAATGATGTCTTA
ATTATAGTTATTAGCAACTTCAGTGAAATTCCTCTCTGGCTAAGAAATAAGAATAATGTTATTTTAGCGAGAAGTGGGCA
AGCACCTTGGCTTTTAGGCACCTGGGTTATAGGAGATATAAACTATGCTCTATTCTTTGGAACATTGCCCGAAGACAAAG
GTAAAGAAAGATTTTACTCTTTCTGGGTTAAATCTACGAGATTAATACAAAACTATGTCCACTGGTTTTACACAATGTAC
TTTGACAATAGTGAAATAGTAAAGCCACTCAATTATGAAAGAATGGAAAAACCTTTGACACTTAGTCACATTAGGACTGT
TATTACCGTACTAAAGCAGGCAGGATTGCCTAGAAATATTGAAGTTATTGGAAGATCCTTAGCTGATAAGAAGCAGGTGA
CTATTAAAGGTAAGGTTATTGATTACGAATATACTCCTCTCACAGCCAACATTACAGTGAAGACAGACAACAAAAAAATA
AAGGTTGGAGGGCTAGGAAGTTACTTGGAAGATATAGAAGGGGAATCTTTTATCCTTCTTGACTGA

Upstream 100 bases:

>100_bases
TAGGGTATAAATAGCTTTGGACTCTATGCCAAAACTTTTATACATATTCTTAACATTTTTATGTAGATTGTAGGTAAAAC
TCATAGGGGGGTCTATATTA

Downstream 100 bases:

>100_bases
TTCTTTTCTTTTCTGTTGTTGCTTCTACAAGTATTATGTCCCCAACGGCAGTTACCCTTTCATATGGAACTCCTACTCTT
TCACCGGGGAGAGCTAGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MLEEEILQKLQKFGLTKYESLAYLTLLKLGPSKATDVTKESGIPHTRIYDVLSSLARKGFVDIVHGTPRLYAPVNPEIVL
EKIREDLISDIERLKKAFQELYREVHGEELPEIWTVHGFENTIDRAQHIIRSAKHDILINTPYEFLEYLRGVLEKRNDVL
IIVISNFSEIPLWLRNKNNVILARSGQAPWLLGTWVIGDINYALFFGTLPEDKGKERFYSFWVKSTRLIQNYVHWFYTMY
FDNSEIVKPLNYERMEKPLTLSHIRTVITVLKQAGLPRNIEVIGRSLADKKQVTIKGKVIDYEYTPLTANITVKTDNKKI
KVGGLGSYLEDIEGESFILLD

Sequences:

>Translated_341_residues
MLEEEILQKLQKFGLTKYESLAYLTLLKLGPSKATDVTKESGIPHTRIYDVLSSLARKGFVDIVHGTPRLYAPVNPEIVL
EKIREDLISDIERLKKAFQELYREVHGEELPEIWTVHGFENTIDRAQHIIRSAKHDILINTPYEFLEYLRGVLEKRNDVL
IIVISNFSEIPLWLRNKNNVILARSGQAPWLLGTWVIGDINYALFFGTLPEDKGKERFYSFWVKSTRLIQNYVHWFYTMY
FDNSEIVKPLNYERMEKPLTLSHIRTVITVLKQAGLPRNIEVIGRSLADKKQVTIKGKVIDYEYTPLTANITVKTDNKKI
KVGGLGSYLEDIEGESFILLD
>Mature_341_residues
MLEEEILQKLQKFGLTKYESLAYLTLLKLGPSKATDVTKESGIPHTRIYDVLSSLARKGFVDIVHGTPRLYAPVNPEIVL
EKIREDLISDIERLKKAFQELYREVHGEELPEIWTVHGFENTIDRAQHIIRSAKHDILINTPYEFLEYLRGVLEKRNDVL
IIVISNFSEIPLWLRNKNNVILARSGQAPWLLGTWVIGDINYALFFGTLPEDKGKERFYSFWVKSTRLIQNYVHWFYTMY
FDNSEIVKPLNYERMEKPLTLSHIRTVITVLKQAGLPRNIEVIGRSLADKKQVTIKGKVIDYEYTPLTANITVKTDNKKI
KVGGLGSYLEDIEGESFILLD

Specific function: Unknown

COG id: COG1378

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021586
- InterPro:   IPR002831
- InterPro:   IPR011991 [H]

Pfam domain/function: PF11495 Regulator_TrmB; PF01978 TrmB [H]

EC number: NA

Molecular weight: Translated: 39427; Mature: 39427

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEEEILQKLQKFGLTKYESLAYLTLLKLGPSKATDVTKESGIPHTRIYDVLSSLARKGF
CCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCC
VDIVHGTPRLYAPVNPEIVLEKIREDLISDIERLKKAFQELYREVHGEELPEIWTVHGFE
EEEECCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCH
NTIDRAQHIIRSAKHDILINTPYEFLEYLRGVLEKRNDVLIIVISNFSEIPLWLRNKNNV
HHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCCCE
ILARSGQAPWLLGTWVIGDINYALFFGTLPEDKGKERFYSFWVKSTRLIQNYVHWFYTMY
EEEECCCCCEEEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEE
FDNSEIVKPLNYERMEKPLTLSHIRTVITVLKQAGLPRNIEVIGRSLADKKQVTIKGKVI
ECCCHHCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEEEEE
DYEYTPLTANITVKTDNKKIKVGGLGSYLEDIEGESFILLD
EEEECCEEEEEEEEECCCEEEECCCHHHHHHCCCCEEEEEC
>Mature Secondary Structure
MLEEEILQKLQKFGLTKYESLAYLTLLKLGPSKATDVTKESGIPHTRIYDVLSSLARKGF
CCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCC
VDIVHGTPRLYAPVNPEIVLEKIREDLISDIERLKKAFQELYREVHGEELPEIWTVHGFE
EEEECCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCH
NTIDRAQHIIRSAKHDILINTPYEFLEYLRGVLEKRNDVLIIVISNFSEIPLWLRNKNNV
HHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCCCE
ILARSGQAPWLLGTWVIGDINYALFFGTLPEDKGKERFYSFWVKSTRLIQNYVHWFYTMY
EEEECCCCCEEEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEE
FDNSEIVKPLNYERMEKPLTLSHIRTVITVLKQAGLPRNIEVIGRSLADKKQVTIKGKVI
ECCCHHCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEEEEE
DYEYTPLTANITVKTDNKKIKVGGLGSYLEDIEGESFILLD
EEEECCEEEEEEEEECCCEEEECCCHHHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]