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The map label for this gene is yejH [H]

Identifier: 18976498

GI number: 18976498

Start: 131060

End: 132394

Strand: Direct

Name: yejH [H]

Synonym: PF0126

Alternate gene names: 18976498

Gene position: 131060-132394 (Clockwise)

Preceding gene: 18976496

Following gene: 18976500

Centisome position: 6.87

GC content: 37.98

Gene sequence:

>1335_bases
ATGATAGTGTTTAGGATACCTGAAGGTAGTGCGAAAGTTAAAATAGAGAAGGCAGACCCAAAGGTATATTTTCAAATTTA
TGACTTACTTTCATATAGGAAAGATTATGGAAGATGGAACAAAGCAGAGAGCTTGTATGATCCCTATACAAATACTTTTC
CGGTAGGACTTTTGCCTAGGGTAAAGAAGTTTCTCAATTCTAAAGGGTACAGGGTAAGAATAAAAGACGAGAGGAAAATC
GAAGGAGAAAAATTAAATTCCACATGGAACGAAAAATACAAACTAAGAAAATACCAGATGAAAGCTGTTAAAAAAGCTCT
TAAGGAAAAAATGGGAGTTTTAGCTCTTCCTGTTGGGAGTGGGAAGACTATAGTTGGGCTAAGAATAATTCATGAATTGG
ACTTATCTGCCCTAATTATAGTGCACACAAAAGAGTTACTATACCAGTGGGCTCAAAAGATTAAGGAAGTTTTGGGGATA
GATCCTGGGATAATAGGAGATAATAAGTGGTATGAAGGCCCTATAACAGTGGCCATGATTCAAACATTGCTTTCGAGAGG
CACTGATAAATTTGAAAGAAAGTATGCAGTGGTATTATTTGATGAGTGTCATAGAACATCTGCCGCAGAAAAGTTCTACG
AAGTTGGTGTAAACCTGCCTCAAGTTTATAGGTTTGGGCTTTCAGCTACTCCTTGGAGAAGATTAAGGGGAGAAGAAATG
AAAATTGAAGGTGTCGTTGGGCCAATAATCTACGAGGTAAAGGCTGAAGATTTAATCCGTGAAGGCTTTCTTGCAAAGCC
GAAGTTTGAAATAATAGAATACCAATCCCACATGCCCTCGTTAGCTGACAAATACAAAGAACTTTACGAAGAAGCAATTA
TGGAAAATGAGGCAAGGAATAAAGCAATAATAGAAAAGGCTATTGAATTAGTAAGGAGGGGACATAGGGTTCTGATTGAT
GTAAAGAGGATAGACCATGGAGAAATGCTGGCAAAAATGTTAAAGGAGAGAGGAATAAAAGCTGAGTTCCTAAGCTCTCA
AAGTCCAAATAGGTGGGAAATACTCGAGAAATACAAGAAGGGAGAAATACAAGTACTCGTATCTACCCTCTTAAAAGAGG
GAGTAGACATACCCGAGATCTCAGCAATTATTTTAGCAGGGGGAGGAAAGAGTGATATAATGACAATCCAGACAATAGGT
AGGGCATTGAGGCCCAAAAAAGGAGGAGAGGCTGTTATTGTGGACATAAAAGATGATGATCCCCTATTGTTCACCCACTT
TTTGGAAAGACAAAAAGCATTGAAACAGTATTATGGAAGATATTACAACCTTTGA

Upstream 100 bases:

>100_bases
TAAGCACAATATTTTCCAAACTTCTTAAAATGTTTTTGAATGTACTGTGCAAATTTTTATAAATCCCTTCACTTCAACTT
TCCCTTCGTAGTGAGGAAAT

Downstream 100 bases:

>100_bases
AGAGTTTCTCTGATGTATTTGGGCATTTGGAAGAGTGTTTCATGCATTAAGGGATCGTAATATTCAAGCTGTAGCTTTTT
AGCTCTTTCTCTGTCAATCT

Product: DNA repair protein rad25

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MIVFRIPEGSAKVKIEKADPKVYFQIYDLLSYRKDYGRWNKAESLYDPYTNTFPVGLLPRVKKFLNSKGYRVRIKDERKI
EGEKLNSTWNEKYKLRKYQMKAVKKALKEKMGVLALPVGSGKTIVGLRIIHELDLSALIIVHTKELLYQWAQKIKEVLGI
DPGIIGDNKWYEGPITVAMIQTLLSRGTDKFERKYAVVLFDECHRTSAAEKFYEVGVNLPQVYRFGLSATPWRRLRGEEM
KIEGVVGPIIYEVKAEDLIREGFLAKPKFEIIEYQSHMPSLADKYKELYEEAIMENEARNKAIIEKAIELVRRGHRVLID
VKRIDHGEMLAKMLKERGIKAEFLSSQSPNRWEILEKYKKGEIQVLVSTLLKEGVDIPEISAIILAGGGKSDIMTIQTIG
RALRPKKGGEAVIVDIKDDDPLLFTHFLERQKALKQYYGRYYNL

Sequences:

>Translated_444_residues
MIVFRIPEGSAKVKIEKADPKVYFQIYDLLSYRKDYGRWNKAESLYDPYTNTFPVGLLPRVKKFLNSKGYRVRIKDERKI
EGEKLNSTWNEKYKLRKYQMKAVKKALKEKMGVLALPVGSGKTIVGLRIIHELDLSALIIVHTKELLYQWAQKIKEVLGI
DPGIIGDNKWYEGPITVAMIQTLLSRGTDKFERKYAVVLFDECHRTSAAEKFYEVGVNLPQVYRFGLSATPWRRLRGEEM
KIEGVVGPIIYEVKAEDLIREGFLAKPKFEIIEYQSHMPSLADKYKELYEEAIMENEARNKAIIEKAIELVRRGHRVLID
VKRIDHGEMLAKMLKERGIKAEFLSSQSPNRWEILEKYKKGEIQVLVSTLLKEGVDIPEISAIILAGGGKSDIMTIQTIG
RALRPKKGGEAVIVDIKDDDPLLFTHFLERQKALKQYYGRYYNL
>Mature_444_residues
MIVFRIPEGSAKVKIEKADPKVYFQIYDLLSYRKDYGRWNKAESLYDPYTNTFPVGLLPRVKKFLNSKGYRVRIKDERKI
EGEKLNSTWNEKYKLRKYQMKAVKKALKEKMGVLALPVGSGKTIVGLRIIHELDLSALIIVHTKELLYQWAQKIKEVLGI
DPGIIGDNKWYEGPITVAMIQTLLSRGTDKFERKYAVVLFDECHRTSAAEKFYEVGVNLPQVYRFGLSATPWRRLRGEEM
KIEGVVGPIIYEVKAEDLIREGFLAKPKFEIIEYQSHMPSLADKYKELYEEAIMENEARNKAIIEKAIELVRRGHRVLID
VKRIDHGEMLAKMLKERGIKAEFLSSQSPNRWEILEKYKKGEIQVLVSTLLKEGVDIPEISAIILAGGGKSDIMTIQTIG
RALRPKKGGEAVIVDIKDDDPLLFTHFLERQKALKQYYGRYYNL

Specific function: Unknown

COG id: COG1061

COG function: function code KL; DNA or RNA helicases of superfamily II

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1788511, Length=360, Percent_Identity=24.4444444444444, Blast_Score=92, Evalue=6e-20,
Organism=Saccharomyces cerevisiae, GI6320539, Length=350, Percent_Identity=25.4285714285714, Blast_Score=96, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR006935 [H]

Pfam domain/function: PF00271 Helicase_C; PF04851 ResIII [H]

EC number: NA

Molecular weight: Translated: 51220; Mature: 51220

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVFRIPEGSAKVKIEKADPKVYFQIYDLLSYRKDYGRWNKAESLYDPYTNTFPVGLLPR
CEEEEECCCCCEEEEEECCCEEHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCHHHH
VKKFLNSKGYRVRIKDERKIEGEKLNSTWNEKYKLRKYQMKAVKKALKEKMGVLALPVGS
HHHHHCCCCCEEEECCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCC
GKTIVGLRIIHELDLSALIIVHTKELLYQWAQKIKEVLGIDPGIIGDNKWYEGPITVAMI
CCEEEHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH
QTLLSRGTDKFERKYAVVLFDECHRTSAAEKFYEVGVNLPQVYRFGLSATPWRRLRGEEM
HHHHHCCCHHHHCEEEEEEEHHHHCHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHCCCCE
KIEGVVGPIIYEVKAEDLIREGFLAKPKFEIIEYQSHMPSLADKYKELYEEAIMENEARN
EEEECCCHHEEEHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
KAIIEKAIELVRRGHRVLIDVKRIDHGEMLAKMLKERGIKAEFLSSQSPNRWEILEKYKK
HHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHCCCCEEHHCCCCCCHHHHHHHHCC
GEIQVLVSTLLKEGVDIPEISAIILAGGGKSDIMTIQTIGRALRPKKGGEAVIVDIKDDD
CHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEHHHHHHHHCCCCCCCEEEEEECCCC
PLLFTHFLERQKALKQYYGRYYNL
CHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIVFRIPEGSAKVKIEKADPKVYFQIYDLLSYRKDYGRWNKAESLYDPYTNTFPVGLLPR
CEEEEECCCCCEEEEEECCCEEHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCHHHH
VKKFLNSKGYRVRIKDERKIEGEKLNSTWNEKYKLRKYQMKAVKKALKEKMGVLALPVGS
HHHHHCCCCCEEEECCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCC
GKTIVGLRIIHELDLSALIIVHTKELLYQWAQKIKEVLGIDPGIIGDNKWYEGPITVAMI
CCEEEHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH
QTLLSRGTDKFERKYAVVLFDECHRTSAAEKFYEVGVNLPQVYRFGLSATPWRRLRGEEM
HHHHHCCCHHHHCEEEEEEEHHHHCHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHCCCCE
KIEGVVGPIIYEVKAEDLIREGFLAKPKFEIIEYQSHMPSLADKYKELYEEAIMENEARN
EEEECCCHHEEEHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
KAIIEKAIELVRRGHRVLIDVKRIDHGEMLAKMLKERGIKAEFLSSQSPNRWEILEKYKK
HHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHCCCCEEHHCCCCCCHHHHHHHHCC
GEIQVLVSTLLKEGVDIPEISAIILAGGGKSDIMTIQTIGRALRPKKGGEAVIVDIKDDD
CHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEHHHHHHHHCCCCCCCEEEEEECCCC
PLLFTHFLERQKALKQYYGRYYNL
CHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]