Click here to switch to the map view.

The map label for this gene is 18976492

Identifier: 18976492

GI number: 18976492

Start: 125631

End: 126665

Strand: Direct

Name: 18976492

Synonym: PF0120

Alternate gene names: NA

Gene position: 125631-126665 (Clockwise)

Preceding gene: 18976485

Following gene: 18976496

Centisome position: 6.58

GC content: 41.16

Gene sequence:

>1035_bases
ATGGCTCGAAAAATACGAAAACTCCGAAAAGCAGAAGTGAACTACATTACTATCAAGGCAACGCTCGAAGCAGAAAAGAA
GGAAGACTATCTAAAACTTGCCCTTTTAACAGAAAAATTTAAGAGAGCTGTCGAACTGTCGATAAGACTCCAGCTTAAGG
GTGTTAAGAAGAGCGAGGGTGTGAAAGAAGTTTCTCGACTGATTCTCAACAACTGGTGGTATTCCGACAGTGCTTGGGAT
TATGCGAAAATGCTCCGTAAAGGTGCAGAGCGAAGCGGAGGGAATCCAAAACACATTCATCTGAAGTCCAAGTTTCTCAT
CAGCAAGCCAAAAGAAAACGAGAATGGAAATAGAAACGTTAGGATTAATGGGTTGAAAGTTAAAATCCGTTCAAACGGCG
AATGGCTGAACTTTAAACTGAAAACCGCTGAAAAATTTCTTCCCATTATTTTTGAGGCTCAGAAGTTCAAGTATGGTGCC
CAAGTTATCTTGAAGGACGGAAAAGTTTATATTCATATTCAAGTGCCGTTTGATGTTTGCCTGAGGTATTACGGGAAAGT
GAACGGCGGACATCTCTACGCAGGGTTTGATTTGAATTCCGATAGAATTAATATGGTTGTTCTCGATGAGAACAGTATAA
TCCGAGATGTTAAAGTTGAACACTTTCCAGAAGTCAATTCTCCGGGTTTTTCAAGGAAAAAGGCGAAAGATTTGAGGCTA
AAGGCTCTTGCTTGCTTGCTAGACTATGCATATCATCACGGTGTTAAAGTCGTGTTCTTTGAGGATTTGGGAATTATTAA
AAGGAGAAACGGACGGGTAACGACCTCAAGGAGAGGAAATCGGAAGGCATCGAACTTTGCTAAAAAGGAGTTGTTTGAAG
TTTACTTGGTGAATCTTGCTGGTTCTTCAAAATTGGGACGAGAGTTAGCTGGGAACTTAGGTTTGGACGTCCACTCGTCT
TCAGCTTTCGTAATTGGCTGGTGGGGATTAAGCTCACTAAAACTCACAAACACTCCAAAAAATGGGAACAGTTGA

Upstream 100 bases:

>100_bases
TTCCAGACGAGTTGGAGGTTAAATTCCGGAAGAAAATCCTCGAAATTTACGGTGTTAAGAAAGGAGTTCTTGGAATGGCG
ATAACAGAGGCGATTGAATT

Downstream 100 bases:

>100_bases
GAAGGCTATATTATAATTCCTCCTTAATAGTCTCTGCTAACCTCTTTACTCCCTCTTGGATCTTGTCCTCATCTACGTAG
GTAAAGTTGAGCCTCATTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MARKIRKLRKAEVNYITIKATLEAEKKEDYLKLALLTEKFKRAVELSIRLQLKGVKKSEGVKEVSRLILNNWWYSDSAWD
YAKMLRKGAERSGGNPKHIHLKSKFLISKPKENENGNRNVRINGLKVKIRSNGEWLNFKLKTAEKFLPIIFEAQKFKYGA
QVILKDGKVYIHIQVPFDVCLRYYGKVNGGHLYAGFDLNSDRINMVVLDENSIIRDVKVEHFPEVNSPGFSRKKAKDLRL
KALACLLDYAYHHGVKVVFFEDLGIIKRRNGRVTTSRRGNRKASNFAKKELFEVYLVNLAGSSKLGRELAGNLGLDVHSS
SAFVIGWWGLSSLKLTNTPKNGNS

Sequences:

>Translated_344_residues
MARKIRKLRKAEVNYITIKATLEAEKKEDYLKLALLTEKFKRAVELSIRLQLKGVKKSEGVKEVSRLILNNWWYSDSAWD
YAKMLRKGAERSGGNPKHIHLKSKFLISKPKENENGNRNVRINGLKVKIRSNGEWLNFKLKTAEKFLPIIFEAQKFKYGA
QVILKDGKVYIHIQVPFDVCLRYYGKVNGGHLYAGFDLNSDRINMVVLDENSIIRDVKVEHFPEVNSPGFSRKKAKDLRL
KALACLLDYAYHHGVKVVFFEDLGIIKRRNGRVTTSRRGNRKASNFAKKELFEVYLVNLAGSSKLGRELAGNLGLDVHSS
SAFVIGWWGLSSLKLTNTPKNGNS
>Mature_343_residues
ARKIRKLRKAEVNYITIKATLEAEKKEDYLKLALLTEKFKRAVELSIRLQLKGVKKSEGVKEVSRLILNNWWYSDSAWDY
AKMLRKGAERSGGNPKHIHLKSKFLISKPKENENGNRNVRINGLKVKIRSNGEWLNFKLKTAEKFLPIIFEAQKFKYGAQ
VILKDGKVYIHIQVPFDVCLRYYGKVNGGHLYAGFDLNSDRINMVVLDENSIIRDVKVEHFPEVNSPGFSRKKAKDLRLK
ALACLLDYAYHHGVKVVFFEDLGIIKRRNGRVTTSRRGNRKASNFAKKELFEVYLVNLAGSSKLGRELAGNLGLDVHSSS
AFVIGWWGLSSLKLTNTPKNGNS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.pernix APE1276 and APE1804 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010094 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39254; Mature: 39123

Theoretical pI: Translated: 10.70; Mature: 10.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARKIRKLRKAEVNYITIKATLEAEKKEDYLKLALLTEKFKRAVELSIRLQLKGVKKSEG
CCHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCC
VKEVSRLILNNWWYSDSAWDYAKMLRKGAERSGGNPKHIHLKSKFLISKPKENENGNRNV
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCCCCEE
RINGLKVKIRSNGEWLNFKLKTAEKFLPIIFEAQKFKYGAQVILKDGKVYIHIQVPFDVC
EEEEEEEEEECCCCEEEEEEECHHHHHHEEEECCCCCCCEEEEEECCEEEEEEECCHHHH
LRYYGKVNGGHLYAGFDLNSDRINMVVLDENSIIRDVKVEHFPEVNSPGFSRKKAKDLRL
HHHHCCCCCCEEEEEEECCCCEEEEEEECCCCCEEECCHHHCCCCCCCCCCCHHHHHHHH
KALACLLDYAYHHGVKVVFFEDLGIIKRRNGRVTTSRRGNRKASNFAKKELFEVYLVNLA
HHHHHHHHHHHHCCEEEEEEECCCEEEECCCEEEECCCCCCCHHHHHHHHHEEEEEEEEC
GSSKLGRELAGNLGLDVHSSSAFVIGWWGLSSLKLTNTPKNGNS
CCCHHHHHHHCCCCEEEECCCEEEEEEECCCEEEEECCCCCCCC
>Mature Secondary Structure 
ARKIRKLRKAEVNYITIKATLEAEKKEDYLKLALLTEKFKRAVELSIRLQLKGVKKSEG
CHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCC
VKEVSRLILNNWWYSDSAWDYAKMLRKGAERSGGNPKHIHLKSKFLISKPKENENGNRNV
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCCCCEE
RINGLKVKIRSNGEWLNFKLKTAEKFLPIIFEAQKFKYGAQVILKDGKVYIHIQVPFDVC
EEEEEEEEEECCCCEEEEEEECHHHHHHEEEECCCCCCCEEEEEECCEEEEEEECCHHHH
LRYYGKVNGGHLYAGFDLNSDRINMVVLDENSIIRDVKVEHFPEVNSPGFSRKKAKDLRL
HHHHCCCCCCEEEEEEECCCCEEEEEEECCCCCEEECCHHHCCCCCCCCCCCHHHHHHHH
KALACLLDYAYHHGVKVVFFEDLGIIKRRNGRVTTSRRGNRKASNFAKKELFEVYLVNLA
HHHHHHHHHHHHCCEEEEEEECCCEEEECCCEEEECCCCCCCHHHHHHHHHEEEEEEEEC
GSSKLGRELAGNLGLDVHSSSAFVIGWWGLSSLKLTNTPKNGNS
CCCHHHHHHHCCCCEEEECCCEEEEEEECCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8899719; 11427726 [H]