| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
Click here to switch to the map view.
The map label for this gene is 189424530
Identifier: 189424530
GI number: 189424530
Start: 1531498
End: 1533879
Strand: Reverse
Name: 189424530
Synonym: Glov_1468
Alternate gene names: NA
Gene position: 1533879-1531498 (Counterclockwise)
Preceding gene: 189424531
Following gene: 189424529
Centisome position: 39.15
GC content: 60.58
Gene sequence:
>2382_bases ATGAAGAATCTGTCCGGCCTGGTCTGTTTTGTCGTGACCCTTGCCGTCACATCAATGGCCTCAGCAGCCAGCTACACCCT GAGCATCAGCACCGACAAGACCAGCTATACCCCTGGTCAGACCATGAACATCACTGCCATCTTCAAAAAAGACAGCACCG GCATTACCTCCCCCAGCAAACGTGAAGTCAGAATCAAGGACTCGTCCGGCAGAGAACTGGTGAAGACCAGCATGAGCAAC GCCGGCAGCGGAAAATATACCTATGCCTACAAACTCTCCAGTTCAGCCAGGACCGGCAAGTATGAAGTTCGCGGTGAGTT TGAATATAATGGCAACAAGAGAACGGCCTACAGCTACCCCCAGGTAGCAACCAGTAGCGCCGACACCATTGCGCCGGTCA CCTCTGTCTCCCCGGCAGGGGGCAACTACACCACGGCGCAGTCGGTCAGGCTGACAGCCAACGAGGCTGCCACCATCTAC TACACCACCAACGGCAGCACCCCCTCCACCGCCTCTGCCGTCTACAGCGCACCACTGACCATCAGCGCCACCACCACCCT GAAGTATTTCGCCCGCGACACAGCCGGTAACAGTGAAGCGGTAAAGACTGCCACCTACACCATCAGCACAACACCACCAG CTGATACAACGGCGCCGGTCACCTCTGTTTCCCCGGCAGGGGGCAGCTACACCACGGCGCAGTCGGTCAGACTGACAGCC AATGAGGCTGCCACCATCTACTACACCACCAACGGCAGCACCCCCACCACCGCCTCTGCCGTCTACAGTACGCCGCTGAC CATCAGCGCCACCACCACCCTGAAGTACTTCGCCCGCGACACAGCCGGTAACAGTGAAGCGGTAAAGACTGCCACCTACA CCATCGGTTCCACCGGCGGCAGCGGTCCCCACGCCGGTCTGACCTACACCGGCACCACCATGTGCCTGCAGTGCCACACC AAACAGGCCACCGATCTGGCCGGTTCGGTCCACTACAAGTGGGAGACCCCCTACGCCGCCATCAGCAACAAACCAGGGGT AACCGGCGGCAAACTGAACACCGCCGTCAACGCCTACTGCATCAACACCCTGGGCAACTGGAACGGCTGCGGTTCATGCC ATATCGGTGCCGGTGCCAAGCCGGGCACCATTGCCGATGCCACCCAGAACATCGACTGTCTGATCTGCCACCAGGTTGCC TACAAGCGGGTACGTAACGCCACCACCGGCCTGTTTGAGCCGGACACCGCCAAGATGACCATCTCCATGGATCAGGCCGT GCAGACCCTGCACAAGCCGGTTAAATCAAACTGTCTGCAGTGCCATGCCAAGGGCGGCGGCGGTGATGCCCTCAAGCGTG GCGACCTGGCAGTAATCAACGGCACCACCACCGACCGCAACTACGATGTCCATATGGCCTCCACCGGCGCCAACCTGACC TGTCAGCAGTGCCACACCTACACCAACCACCATGTGGCCGGTCGCGGCTCAGACCTGCGCCCCACCGACAGCACCGTAAC CGTCGGCTGTGCAACCAGCAGCTGCCACAGCAACAAGGCTGCCCTGAATGCCGGTCATGCCACCACCGCCATCAACACCC ACCTGAAGCGTGTGGCCTGCCAGACCTGCCATATCCCCTCCTACGGCAGAAAGGCGGCTGATGCCGTACTGGACACCGTG ACCGGCTTTGGTGACCAGTCCACTGAAACCGACCGCACCTGGGTAACCCCCGAATGGTCAGTGGCCAACAACCGCTGGGA GCCGACCGTTGTCCGTGCCAACAACCTGAAGCCGGTCTACGCCTTCTATGACGGCAGCTCCTGGGTCTATGACCTGCATG ATGTGGCCGTGATCGATCCGGCCACCGGCAACTACAAGATCAGCCGTCCCAACGGCGGCATCAACACCGCCAACACCAAG CTGTATCCGTTCAAGTACAAGACCTCGACCCAGCCGATGCACACTGCCAGCGGCAAGCTGATCGCCCTGAACACCTCGGT CTACTTCAAGACCGCCGATGTGGCCGGTGCCATCCAGTCCGGCCTGACCAACATGGGTCTGAACCCGGGCGATGCCTACA GCATGGTCAAGGCCGACGAGTACCAGATGCTGAACCACACCGTGGCACCCAAGGCCAACGCCCTGCAGTGTGCTGCCTGC CACGGCACCGCCAGCGTACCGGCAACCCACATGAACCTGAAGTCGATGGGCTACACCATGAAGGCTGCCCAGTCCGTAGT CTGCATCCAGTGCCACGGCAACAAGAGCATGCCGAGCTTCACCTCGCTGCACAGCAAGCACGTCACCAGCAAGGGCTATG ACTGTTCCTTCTGCCACAGCTTCAGCCGTGCAACCGAGCGTGGCCTGAAAACCACCAAGTAG
Upstream 100 bases:
>100_bases GACAACGATCCTCCTGCACTGTGCAGTCAAATACCGCCGAAAGCGAACCTGAACAACAAGGTATTCGATCTACGCGGAAG CACCGCAAAGGAGCACATGT
Downstream 100 bases:
>100_bases CAAGCAACACGGGCAAGACAAACAAGCCCCCCTCGGAAACAGCGAGGGGGGCTTTTGCAAGACCATATTTTATATTAAAC AACTACACTATTAAAATATT
Product: hypothetical protein
Products: NA
Alternate protein names: Cytochrome C; Glycoside Hydrolase Family Protein; FG-GAP Repeat-Containing Protein; NHL Repeat Containing Protein; Cytochrome C Chain A; Cellulase; Alpha Amylase Catalytic Region; S-Layer Domain-Containing Protein; Glycoside Hydrolase Family; APHP Domain-Containing Protein; Cell Surface Protein; Alpha Amylase Catalytic Domain-Containing Protein; Ig Domain Domain Protein; Virulence Plasmid; Class III Cytochrome C; Poly(3-Hydroxybutyrate) Depolymerase
Number of amino acids: Translated: 793; Mature: 793
Protein sequence:
>793_residues MKNLSGLVCFVVTLAVTSMASAASYTLSISTDKTSYTPGQTMNITAIFKKDSTGITSPSKREVRIKDSSGRELVKTSMSN AGSGKYTYAYKLSSSARTGKYEVRGEFEYNGNKRTAYSYPQVATSSADTIAPVTSVSPAGGNYTTAQSVRLTANEAATIY YTTNGSTPSTASAVYSAPLTISATTTLKYFARDTAGNSEAVKTATYTISTTPPADTTAPVTSVSPAGGSYTTAQSVRLTA NEAATIYYTTNGSTPTTASAVYSTPLTISATTTLKYFARDTAGNSEAVKTATYTIGSTGGSGPHAGLTYTGTTMCLQCHT KQATDLAGSVHYKWETPYAAISNKPGVTGGKLNTAVNAYCINTLGNWNGCGSCHIGAGAKPGTIADATQNIDCLICHQVA YKRVRNATTGLFEPDTAKMTISMDQAVQTLHKPVKSNCLQCHAKGGGGDALKRGDLAVINGTTTDRNYDVHMASTGANLT CQQCHTYTNHHVAGRGSDLRPTDSTVTVGCATSSCHSNKAALNAGHATTAINTHLKRVACQTCHIPSYGRKAADAVLDTV TGFGDQSTETDRTWVTPEWSVANNRWEPTVVRANNLKPVYAFYDGSSWVYDLHDVAVIDPATGNYKISRPNGGINTANTK LYPFKYKTSTQPMHTASGKLIALNTSVYFKTADVAGAIQSGLTNMGLNPGDAYSMVKADEYQMLNHTVAPKANALQCAAC HGTASVPATHMNLKSMGYTMKAAQSVVCIQCHGNKSMPSFTSLHSKHVTSKGYDCSFCHSFSRATERGLKTTK
Sequences:
>Translated_793_residues MKNLSGLVCFVVTLAVTSMASAASYTLSISTDKTSYTPGQTMNITAIFKKDSTGITSPSKREVRIKDSSGRELVKTSMSN AGSGKYTYAYKLSSSARTGKYEVRGEFEYNGNKRTAYSYPQVATSSADTIAPVTSVSPAGGNYTTAQSVRLTANEAATIY YTTNGSTPSTASAVYSAPLTISATTTLKYFARDTAGNSEAVKTATYTISTTPPADTTAPVTSVSPAGGSYTTAQSVRLTA NEAATIYYTTNGSTPTTASAVYSTPLTISATTTLKYFARDTAGNSEAVKTATYTIGSTGGSGPHAGLTYTGTTMCLQCHT KQATDLAGSVHYKWETPYAAISNKPGVTGGKLNTAVNAYCINTLGNWNGCGSCHIGAGAKPGTIADATQNIDCLICHQVA YKRVRNATTGLFEPDTAKMTISMDQAVQTLHKPVKSNCLQCHAKGGGGDALKRGDLAVINGTTTDRNYDVHMASTGANLT CQQCHTYTNHHVAGRGSDLRPTDSTVTVGCATSSCHSNKAALNAGHATTAINTHLKRVACQTCHIPSYGRKAADAVLDTV TGFGDQSTETDRTWVTPEWSVANNRWEPTVVRANNLKPVYAFYDGSSWVYDLHDVAVIDPATGNYKISRPNGGINTANTK LYPFKYKTSTQPMHTASGKLIALNTSVYFKTADVAGAIQSGLTNMGLNPGDAYSMVKADEYQMLNHTVAPKANALQCAAC HGTASVPATHMNLKSMGYTMKAAQSVVCIQCHGNKSMPSFTSLHSKHVTSKGYDCSFCHSFSRATERGLKTTK >Mature_793_residues MKNLSGLVCFVVTLAVTSMASAASYTLSISTDKTSYTPGQTMNITAIFKKDSTGITSPSKREVRIKDSSGRELVKTSMSN AGSGKYTYAYKLSSSARTGKYEVRGEFEYNGNKRTAYSYPQVATSSADTIAPVTSVSPAGGNYTTAQSVRLTANEAATIY YTTNGSTPSTASAVYSAPLTISATTTLKYFARDTAGNSEAVKTATYTISTTPPADTTAPVTSVSPAGGSYTTAQSVRLTA NEAATIYYTTNGSTPTTASAVYSTPLTISATTTLKYFARDTAGNSEAVKTATYTIGSTGGSGPHAGLTYTGTTMCLQCHT KQATDLAGSVHYKWETPYAAISNKPGVTGGKLNTAVNAYCINTLGNWNGCGSCHIGAGAKPGTIADATQNIDCLICHQVA YKRVRNATTGLFEPDTAKMTISMDQAVQTLHKPVKSNCLQCHAKGGGGDALKRGDLAVINGTTTDRNYDVHMASTGANLT CQQCHTYTNHHVAGRGSDLRPTDSTVTVGCATSSCHSNKAALNAGHATTAINTHLKRVACQTCHIPSYGRKAADAVLDTV TGFGDQSTETDRTWVTPEWSVANNRWEPTVVRANNLKPVYAFYDGSSWVYDLHDVAVIDPATGNYKISRPNGGINTANTK LYPFKYKTSTQPMHTASGKLIALNTSVYFKTADVAGAIQSGLTNMGLNPGDAYSMVKADEYQMLNHTVAPKANALQCAAC HGTASVPATHMNLKSMGYTMKAAQSVVCIQCHGNKSMPSFTSLHSKHVTSKGYDCSFCHSFSRATERGLKTTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83732; Mature: 83732
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNLSGLVCFVVTLAVTSMASAASYTLSISTDKTSYTPGQTMNITAIFKKDSTGITSPSK CCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEEEEEEECCCCCCCCCC REVRIKDSSGRELVKTSMSNAGSGKYTYAYKLSSSARTGKYEVRGEFEYNGNKRTAYSYP CEEEEECCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEEEEEEECCCEEEEECCC QVATSSADTIAPVTSVSPAGGNYTTAQSVRLTANEAATIYYTTNGSTPSTASAVYSAPLT CCCCCCCCCCCCCCCCCCCCCCEEECEEEEEEECCEEEEEEEECCCCCCCCHHEEECCEE ISATTTLKYFARDTAGNSEAVKTATYTISTTPPADTTAPVTSVSPAGGSYTTAQSVRLTA EEEEHEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEECEEEEEEE NEAATIYYTTNGSTPTTASAVYSTPLTISATTTLKYFARDTAGNSEAVKTATYTIGSTGG CCEEEEEEEECCCCCCCCCEEEECCEEEEEEHEEEEEECCCCCCCCEEEEEEEEEECCCC SGPHAGLTYTGTTMCLQCHTKQATDLAGSVHYKWETPYAAISNKPGVTGGKLNTAVNAYC CCCCCCEEEECCEEEEEECCCCCCCCCCEEEEEECCCCCEECCCCCCCCCCCCCEEEEEE INTLGNWNGCGSCHIGAGAKPGTIADATQNIDCLICHQVAYKRVRNATTGLFEPDTAKMT EECCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCEEE ISMDQAVQTLHKPVKSNCLQCHAKGGGGDALKRGDLAVINGTTTDRNYDVHMASTGANLT EEHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCEE CQQCHTYTNHHVAGRGSDLRPTDSTVTVGCATSSCHSNKAALNAGHATTAINTHLKRVAC HHHHHCCCCCEECCCCCCCCCCCCEEEEEEECCCCCCCCCEEECCCCHHHHHHHHHHHHH QTCHIPSYGRKAADAVLDTVTGFGDQSTETDRTWVTPEWSVANNRWEPTVVRANNLKPVY HHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEECCCCEEE AFYDGSSWVYDLHDVAVIDPATGNYKISRPNGGINTANTKLYPFKYKTSTQPMHTASGKL EEECCCCEEEEECEEEEECCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCEE IALNTSVYFKTADVAGAIQSGLTNMGLNPGDAYSMVKADEYQMLNHTVAPKANALQCAAC EEEECEEEEEEHHHHHHHHHCHHHCCCCCCCCEEEEECCHHHHHHCCCCCCCCCEEEEEC HGTASVPATHMNLKSMGYTMKAAQSVVCIQCHGNKSMPSFTSLHSKHVTSKGYDCSFCHS CCCCCCCEEEEEHHHCCEEECCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCHHHHHH FSRATERGLKTTK HHHHHHCCCCCCC >Mature Secondary Structure MKNLSGLVCFVVTLAVTSMASAASYTLSISTDKTSYTPGQTMNITAIFKKDSTGITSPSK CCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEEEEEEECCCCCCCCCC REVRIKDSSGRELVKTSMSNAGSGKYTYAYKLSSSARTGKYEVRGEFEYNGNKRTAYSYP CEEEEECCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEEEEEEECCCEEEEECCC QVATSSADTIAPVTSVSPAGGNYTTAQSVRLTANEAATIYYTTNGSTPSTASAVYSAPLT CCCCCCCCCCCCCCCCCCCCCCEEECEEEEEEECCEEEEEEEECCCCCCCCHHEEECCEE ISATTTLKYFARDTAGNSEAVKTATYTISTTPPADTTAPVTSVSPAGGSYTTAQSVRLTA EEEEHEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEECEEEEEEE NEAATIYYTTNGSTPTTASAVYSTPLTISATTTLKYFARDTAGNSEAVKTATYTIGSTGG CCEEEEEEEECCCCCCCCCEEEECCEEEEEEHEEEEEECCCCCCCCEEEEEEEEEECCCC SGPHAGLTYTGTTMCLQCHTKQATDLAGSVHYKWETPYAAISNKPGVTGGKLNTAVNAYC CCCCCCEEEECCEEEEEECCCCCCCCCCEEEEEECCCCCEECCCCCCCCCCCCCEEEEEE INTLGNWNGCGSCHIGAGAKPGTIADATQNIDCLICHQVAYKRVRNATTGLFEPDTAKMT EECCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCEEE ISMDQAVQTLHKPVKSNCLQCHAKGGGGDALKRGDLAVINGTTTDRNYDVHMASTGANLT EEHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCEE CQQCHTYTNHHVAGRGSDLRPTDSTVTVGCATSSCHSNKAALNAGHATTAINTHLKRVAC HHHHHCCCCCEECCCCCCCCCCCCEEEEEEECCCCCCCCCEEECCCCHHHHHHHHHHHHH QTCHIPSYGRKAADAVLDTVTGFGDQSTETDRTWVTPEWSVANNRWEPTVVRANNLKPVY HHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEECCCCEEE AFYDGSSWVYDLHDVAVIDPATGNYKISRPNGGINTANTKLYPFKYKTSTQPMHTASGKL EEECCCCEEEEECEEEEECCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCEE IALNTSVYFKTADVAGAIQSGLTNMGLNPGDAYSMVKADEYQMLNHTVAPKANALQCAAC EEEECEEEEEEHHHHHHHHHCHHHCCCCCCCCEEEEECCHHHHHHCCCCCCCCCEEEEEC HGTASVPATHMNLKSMGYTMKAAQSVVCIQCHGNKSMPSFTSLHSKHVTSKGYDCSFCHS CCCCCCCEEEEEHHHCCEEECCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCHHHHHH FSRATERGLKTTK HHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA