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The map label for this gene is tsr [C]

Identifier: 189424107

GI number: 189424107

Start: 1080721

End: 1082706

Strand: Reverse

Name: tsr [C]

Synonym: Glov_1041

Alternate gene names: 189424107

Gene position: 1082706-1080721 (Counterclockwise)

Preceding gene: 189424108

Following gene: 189424100

Centisome position: 27.64

GC content: 55.64

Gene sequence:

>1986_bases
ATGCTCAAGAACCTCAGCATCCGCATCAAACTGTTACTTCTGCTTTTGCTACCGGTTCTCGGACTGCTCTTTTTTTCAGG
TCGCGAGGTTCTTGACAAGTATGCAGCCCTGCAGGACATCAGACAGACAGAGCAACTGATCGGACTCTCGGTACGCACCG
GTGCACTGGTACATGAACTGCAGAAAGAACGGGGGCTTTCTTCCGGCTTTATTAATGCAAAAGGCGAAAAATTCAGATCA
GAACTGGCTAAACAGCGTGGGCTTTGCGATGAGCAGTTCAAGCAGTTGGCAGCATTCATCGCTGCCACTCCTGATGCGGC
AACAATCGTCAGACAGGCCCTTGATGCCGCAGCAAAACAACAGGAAAAACTCTCTGATATCCGCAACAAGGTTGATGCAC
TGACAATTGAAGGCAAGGAGTCATTCGGGTTTTATACCGCCATTAACTACTCCTACCTGGATGTGGTTGCAGCAGTGGGA
CGCAGCAGCAAGGAGCCGACACTGATGCGCTCCGCCATCGCCTATTTTGCCTTTTCAAAGGTCAAGGAGGAGATGGGTAA
AGAGCGTGCCACACTGAACGCCGTCATTGCCGGCAATGCGTTTAGTGACGAGACCTACCAGCGCACCTTCGGTATTCTTT
CTGCACAAAAAAGCTTTATGGAAGGATTCCGCAAGTTCGGGTCACGCGCCGCAGTCACAACCTATGATGAAAAGGCGCAG
TCTGAATCATTCAAAAAGGCGGATGAGTTACGCAACGCCGTGCTTGCAAAGGGGATGGCCGGCAGCTTTGAAATCACGCC
GGAAACCTGGTTTAGCGCCATTACCGCTAAAATTGATCAGATGAAAGAGATCGAAGACGGGATCGCAAAAGGAATCCTGC
AACAGGCATCCGACCAGGCAGGCACAGCCCGCCTGGCGCTGATTTTAAGTATTGCCATATCACTGACAATGGCTGTCCTG
ACCCTGCTGCTCAGCCTGCTGATTGTCGGCAGTATTACCGGACCGTTGCGCAAGCTGGTAGAGATGCTACAGGATATAGC
CCAGGGCGAGGGAGACCTGACCCGGCGTCTGGACGCCAACCGCAAGGATGAGTTTGGCGAAGTAAGCCACTGGTTTAACC
GCTTTGTTGAGAATATCCACTCCATCATCTCCCAGGCCACCACCACAACGGTCCAGGTCGCTACGGCATCCAACCAGCTG
CACAGCACTGCCGAACAGATCGCGACTGCTGCTGAGGAAGTGGCCTGCCAGTCAGCCACGGTTGCCACAGCCAGTGAAGA
GATGTCAGCCACCTCCAACGACATCTCCCGCAATTGCACCCTGGCGTCCGACATCGCCAACCGTGCCAGTGAAATGGCCC
ATGGTGGTGCCTCTGTGGTACAGGAAACCATCTCAGGTATGCAGACCATTGCAGAGAAGGTGCGTGAATCGGCCCGTACG
GTTGAGGCACTGGGGGCCCGCTCTGACCAGATCGGGGCCATTGTCGGAACGATTGAGGATATTGCCGACCAGACCAACCT
GCTGGCCCTGAATGCCGCCATTGAGGCGGCCCGGGCCGGCGAGATGGGGCGCGGCTTTGCCGTGGTTGCCGACGAAGTAC
GGGCCCTGGCAGAACGGACAACCCGCGCCACCCGCGAGATCGGTGAGATGATCAAGGCGATCCAGCAGGAAACCGGTGGC
GCTGTGACCTCAATGGAGCAGGGAGTTGTAGAGGTTGAGAAAGGGATGGACAGTTCACGCCGATCCGGTGATGCCCTGCA
GCAGATCCTGGAAGGGATCAATGAAGTCACCCTGCAGGTGCATCAGATTGCTACGGCTGCAGAAGAGCAGACCGCCGTCA
CCGGCGAGATATCCACCAACATCCACCAGATCACCGATGTGGTCCAACAAACCGCCAACGGCGCCCATCAAACCGCCGGT
GCAGCCTCAGAACTGTCCGGCCTGGCGAAAGATCTGGAAGGTCTGGTGGGACGCTTCAAGCTGTAG

Upstream 100 bases:

>100_bases
TATGGCTGTAATTTGACTTATGTCAAGGAATAGGTGCCGGAATCATTGTATACAATCACCGATACGCATCCATTTCCCAA
GAATGCCCCGGAGGAGCCCC

Downstream 100 bases:

>100_bases
TCTTCCGTAGCGCAAAAAATCCAACGGGCAGTTCCCTGCAGGAGCTGCCCGTTGGATTCACTTCTGCGCTGAAGGTGATC
AGGAGATCACCTCCTTAACC

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 661; Mature: 661

Protein sequence:

>661_residues
MLKNLSIRIKLLLLLLLPVLGLLFFSGREVLDKYAALQDIRQTEQLIGLSVRTGALVHELQKERGLSSGFINAKGEKFRS
ELAKQRGLCDEQFKQLAAFIAATPDAATIVRQALDAAAKQQEKLSDIRNKVDALTIEGKESFGFYTAINYSYLDVVAAVG
RSSKEPTLMRSAIAYFAFSKVKEEMGKERATLNAVIAGNAFSDETYQRTFGILSAQKSFMEGFRKFGSRAAVTTYDEKAQ
SESFKKADELRNAVLAKGMAGSFEITPETWFSAITAKIDQMKEIEDGIAKGILQQASDQAGTARLALILSIAISLTMAVL
TLLLSLLIVGSITGPLRKLVEMLQDIAQGEGDLTRRLDANRKDEFGEVSHWFNRFVENIHSIISQATTTTVQVATASNQL
HSTAEQIATAAEEVACQSATVATASEEMSATSNDISRNCTLASDIANRASEMAHGGASVVQETISGMQTIAEKVRESART
VEALGARSDQIGAIVGTIEDIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRALAERTTRATREIGEMIKAIQQETGG
AVTSMEQGVVEVEKGMDSSRRSGDALQQILEGINEVTLQVHQIATAAEEQTAVTGEISTNIHQITDVVQQTANGAHQTAG
AASELSGLAKDLEGLVGRFKL

Sequences:

>Translated_661_residues
MLKNLSIRIKLLLLLLLPVLGLLFFSGREVLDKYAALQDIRQTEQLIGLSVRTGALVHELQKERGLSSGFINAKGEKFRS
ELAKQRGLCDEQFKQLAAFIAATPDAATIVRQALDAAAKQQEKLSDIRNKVDALTIEGKESFGFYTAINYSYLDVVAAVG
RSSKEPTLMRSAIAYFAFSKVKEEMGKERATLNAVIAGNAFSDETYQRTFGILSAQKSFMEGFRKFGSRAAVTTYDEKAQ
SESFKKADELRNAVLAKGMAGSFEITPETWFSAITAKIDQMKEIEDGIAKGILQQASDQAGTARLALILSIAISLTMAVL
TLLLSLLIVGSITGPLRKLVEMLQDIAQGEGDLTRRLDANRKDEFGEVSHWFNRFVENIHSIISQATTTTVQVATASNQL
HSTAEQIATAAEEVACQSATVATASEEMSATSNDISRNCTLASDIANRASEMAHGGASVVQETISGMQTIAEKVRESART
VEALGARSDQIGAIVGTIEDIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRALAERTTRATREIGEMIKAIQQETGG
AVTSMEQGVVEVEKGMDSSRRSGDALQQILEGINEVTLQVHQIATAAEEQTAVTGEISTNIHQITDVVQQTANGAHQTAG
AASELSGLAKDLEGLVGRFKL
>Mature_661_residues
MLKNLSIRIKLLLLLLLPVLGLLFFSGREVLDKYAALQDIRQTEQLIGLSVRTGALVHELQKERGLSSGFINAKGEKFRS
ELAKQRGLCDEQFKQLAAFIAATPDAATIVRQALDAAAKQQEKLSDIRNKVDALTIEGKESFGFYTAINYSYLDVVAAVG
RSSKEPTLMRSAIAYFAFSKVKEEMGKERATLNAVIAGNAFSDETYQRTFGILSAQKSFMEGFRKFGSRAAVTTYDEKAQ
SESFKKADELRNAVLAKGMAGSFEITPETWFSAITAKIDQMKEIEDGIAKGILQQASDQAGTARLALILSIAISLTMAVL
TLLLSLLIVGSITGPLRKLVEMLQDIAQGEGDLTRRLDANRKDEFGEVSHWFNRFVENIHSIISQATTTTVQVATASNQL
HSTAEQIATAAEEVACQSATVATASEEMSATSNDISRNCTLASDIANRASEMAHGGASVVQETISGMQTIAEKVRESART
VEALGARSDQIGAIVGTIEDIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRALAERTTRATREIGEMIKAIQQETGG
AVTSMEQGVVEVEKGMDSSRRSGDALQQILEGINEVTLQVHQIATAAEEQTAVTGEISTNIHQITDVVQQTANGAHQTAG
AASELSGLAKDLEGLVGRFKL

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=332, Percent_Identity=30.1204819277108, Blast_Score=125, Evalue=7e-30,
Organism=Escherichia coli, GI1787690, Length=457, Percent_Identity=26.9146608315098, Blast_Score=120, Evalue=4e-28,
Organism=Escherichia coli, GI1788195, Length=306, Percent_Identity=32.0261437908497, Blast_Score=118, Evalue=1e-27,
Organism=Escherichia coli, GI1788194, Length=250, Percent_Identity=34, Blast_Score=105, Evalue=1e-23,
Organism=Escherichia coli, GI1789453, Length=335, Percent_Identity=28.3582089552239, Blast_Score=93, Evalue=7e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 71047; Mature: 71047

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: PS50885 HAMP ; PS50906 NIT ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKNLSIRIKLLLLLLLPVLGLLFFSGREVLDKYAALQDIRQTEQLIGLSVRTGALVHEL
CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
QKERGLSSGFINAKGEKFRSELAKQRGLCDEQFKQLAAFIAATPDAATIVRQALDAAAKQ
HHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
QEKLSDIRNKVDALTIEGKESFGFYTAINYSYLDVVAAVGRSSKEPTLMRSAIAYFAFSK
HHHHHHHHHHHHHEEEECCCCCCEEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
VKEEMGKERATLNAVIAGNAFSDETYQRTFGILSAQKSFMEGFRKFGSRAAVTTYDEKAQ
HHHHHCHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHH
SESFKKADELRNAVLAKGMAGSFEITPETWFSAITAKIDQMKEIEDGIAKGILQQASDQA
HHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GTARLALILSIAISLTMAVLTLLLSLLIVGSITGPLRKLVEMLQDIAQGEGDLTRRLDAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHCCC
RKDEFGEVSHWFNRFVENIHSIISQATTTTVQVATASNQLHSTAEQIATAAEEVACQSAT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHHHHHHH
VATASEEMSATSNDISRNCTLASDIANRASEMAHGGASVVQETISGMQTIAEKVRESART
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
VEALGARSDQIGAIVGTIEDIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRALAERT
HHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
TRATREIGEMIKAIQQETGGAVTSMEQGVVEVEKGMDSSRRSGDALQQILEGINEVTLQV
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
HQIATAAEEQTAVTGEISTNIHQITDVVQQTANGAHQTAGAASELSGLAKDLEGLVGRFK
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHCC
L
C
>Mature Secondary Structure
MLKNLSIRIKLLLLLLLPVLGLLFFSGREVLDKYAALQDIRQTEQLIGLSVRTGALVHEL
CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
QKERGLSSGFINAKGEKFRSELAKQRGLCDEQFKQLAAFIAATPDAATIVRQALDAAAKQ
HHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
QEKLSDIRNKVDALTIEGKESFGFYTAINYSYLDVVAAVGRSSKEPTLMRSAIAYFAFSK
HHHHHHHHHHHHHEEEECCCCCCEEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
VKEEMGKERATLNAVIAGNAFSDETYQRTFGILSAQKSFMEGFRKFGSRAAVTTYDEKAQ
HHHHHCHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHH
SESFKKADELRNAVLAKGMAGSFEITPETWFSAITAKIDQMKEIEDGIAKGILQQASDQA
HHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GTARLALILSIAISLTMAVLTLLLSLLIVGSITGPLRKLVEMLQDIAQGEGDLTRRLDAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHCCC
RKDEFGEVSHWFNRFVENIHSIISQATTTTVQVATASNQLHSTAEQIATAAEEVACQSAT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHHHHHHH
VATASEEMSATSNDISRNCTLASDIANRASEMAHGGASVVQETISGMQTIAEKVRESART
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
VEALGARSDQIGAIVGTIEDIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRALAERT
HHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
TRATREIGEMIKAIQQETGGAVTSMEQGVVEVEKGMDSSRRSGDALQQILEGINEVTLQV
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
HQIATAAEEQTAVTGEISTNIHQITDVVQQTANGAHQTAGAASELSGLAKDLEGLVGRFK
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHCC
L
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA