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The map label for this gene is yddU [C]

Identifier: 189424100

GI number: 189424100

Start: 1074767

End: 1075243

Strand: Reverse

Name: yddU [C]

Synonym: Glov_1034

Alternate gene names: 189424100

Gene position: 1075243-1074767 (Counterclockwise)

Preceding gene: 189424107

Following gene: 189424099

Centisome position: 27.45

GC content: 55.77

Gene sequence:

>477_bases
ATGACAGCAATTGCAAGCCTGCTTGTGCAGACCGTGGAACAGGCTCAGGATGCGATCCTGATCGCTGACAGAGAAGGGAC
AATCCTTTTCTGGAACGCAGGGGCGGAACGGCTGCTCGGCTACAGCGCCGCAGAGGCGATCGGCCGTTCATTAGACCTCT
TCATACCGGAAAAACTGCGGGAACGACACTGGGAAGGGTACTACCGTGTGATGGCCAGTGGAGAGACCAAGTACAAAACC
GGCCTGCTGACATCTCCGGCCGTCCGCAGGGATGGCAGTCAGGTATCGCTGGAATTCAGCATGGTGTTGTTGCATGATGA
GAAAAACGTCATGCTGGGCTGCGCCTCGATCATGCGCGATGTAACCGAACGCTGGCAAAAAGAAAAAGAGCTGAAACAGC
GGCTGGCTGCCTGCGAGGCAGCACAGCGCAACGATATACTGACAAACGATCAAACAGACTCTGACAGGGGCGTGTGA

Upstream 100 bases:

>100_bases
TTGGTCAAGACAGAGCCGAAGAGATGATGCTATGGTATATTTACTGCGGTACAGATAAACATCCCTTTCATAATGCAGCC
GGAAAGAAAGGCAGACCACC

Downstream 100 bases:

>100_bases
CCCATGCAAAAAAAACGGATTGTGATCGTCGGAATGGGATTTGGCGGCGTCCACGCCGCCCAGGCACTGGCCGGCAAGGG
GCATGATATTCTGTTGGTGG

Product: PAS/PAC sensor protein

Products: NA

Alternate protein names: PAS/PAC Sensor Hybrid Histidine Kinase; Multi-Sensor Hybrid Histidine Kinase; PAS Sensor Protein; Transcriptional Regulator; PAS/PAC Sensor Signal Transduction Histidine Kinase; Sensory Box Protein; Two-Component Hybrid Sensor And Regulator; Sensory Box Histidine Kinase/Response Regulator; Signal Transduction Histidine Kinase; Multi-Sensor Signal Transduction Histidine Kinase; Hybrid Sensor Histidine Kinase; Sensor Histidine Kinase; PAS Sensor Signal Transduction Histidine Kinase; Pas/Pac Sensor Signal Transduction Histidine Kinase; Signal-Transducing Histidine Kinase; Chemotaxis Methyltransferase Protein; Two-Component Sensor Histidine Kinase Protein; Diguanylate Cyclase With PAS/PAC Sensor; PAS/PAC Domain-Containing Protein; Pas/Pac Sensor Hybrid Histidine Kinase; Diguanylate Cyclase; Two-Component Sensor Histidine Kinase; PAS PAS/PAC Domain-Containing Sensor Histidine Kinase; PAS Fold Family; Two-Component System Sensory/Regulatory Protein Putative; Signal Transduction Protein; Signal Sensor Protein Isolated PAS Domain; Sensory Transduction Histidine Kinase; Globin; Sensory Box/GGDEF Family Protein

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MTAIASLLVQTVEQAQDAILIADREGTILFWNAGAERLLGYSAAEAIGRSLDLFIPEKLRERHWEGYYRVMASGETKYKT
GLLTSPAVRRDGSQVSLEFSMVLLHDEKNVMLGCASIMRDVTERWQKEKELKQRLAACEAAQRNDILTNDQTDSDRGV

Sequences:

>Translated_158_residues
MTAIASLLVQTVEQAQDAILIADREGTILFWNAGAERLLGYSAAEAIGRSLDLFIPEKLRERHWEGYYRVMASGETKYKT
GLLTSPAVRRDGSQVSLEFSMVLLHDEKNVMLGCASIMRDVTERWQKEKELKQRLAACEAAQRNDILTNDQTDSDRGV
>Mature_157_residues
TAIASLLVQTVEQAQDAILIADREGTILFWNAGAERLLGYSAAEAIGRSLDLFIPEKLRERHWEGYYRVMASGETKYKTG
LLTSPAVRRDGSQVSLEFSMVLLHDEKNVMLGCASIMRDVTERWQKEKELKQRLAACEAAQRNDILTNDQTDSDRGV

Specific function: Unknown

COG id: COG2202

COG function: function code T; FOG: PAS/PAC domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17763; Mature: 17632

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: PS50112 PAS ; PS50113 PAC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAIASLLVQTVEQAQDAILIADREGTILFWNAGAERLLGYSAAEAIGRSLDLFIPEKLR
CHHHHHHHHHHHHHHCCEEEEECCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHH
ERHWEGYYRVMASGETKYKTGLLTSPAVRRDGSQVSLEFSMVLLHDEKNVMLGCASIMRD
HHHHHHHEEEEECCCCHHCCCCCCCCHHHCCCCEEEEEEEEEEEECCCCHHHHHHHHHHH
VTERWQKEKELKQRLAACEAAQRNDILTNDQTDSDRGV
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TAIASLLVQTVEQAQDAILIADREGTILFWNAGAERLLGYSAAEAIGRSLDLFIPEKLR
HHHHHHHHHHHHHHCCEEEEECCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHH
ERHWEGYYRVMASGETKYKTGLLTSPAVRRDGSQVSLEFSMVLLHDEKNVMLGCASIMRD
HHHHHHHEEEEECCCCHHCCCCCCCCHHHCCCCEEEEEEEEEEEECCCCHHHHHHHHHHH
VTERWQKEKELKQRLAACEAAQRNDILTNDQTDSDRGV
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA