| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is metK [H]
Identifier: 189423420
GI number: 189423420
Start: 320612
End: 321778
Strand: Reverse
Name: metK [H]
Synonym: Glov_0349
Alternate gene names: 189423420
Gene position: 321778-320612 (Counterclockwise)
Preceding gene: 189423421
Following gene: 189423419
Centisome position: 8.21
GC content: 58.95
Gene sequence:
>1167_bases ATGGCTGAAAAATTCATCTTCACCTCTGAATCCGTATCCGAAGGTCACCCTGACAAAATGGCTGACCAGATCTCCGACAG CATCCTGGACGCGATCCTGGCCCAGGACCCCAAGGCCCGCGTGGCCTGCGAGACCATGGTGACCACCGGTATGGCCGTGA TTGCCGGTGAAATCACCACCACCGCGGTGGTGAACTATGCCGAGATCGTCCGCAACACCATCAAGGAGATCGGCTACTGC GGTTCCGAGACCGGCTTTGACTATGAGACCTGCTCTGTGCTGGTCTCCCTTGACCGCCAGTCCCCGGACATCTCCCAGGG TGTCACCGAGGGCGAGGGGATGTTCAAGGAGCAGGGAGCCGGTGACCAGGGCCTGATGTTCGGCTATGCCTGCAACGAAA CCCCGGAACTGATGCCGATGCCGATCCAGCTTTCCCATCAGCTGGTCAAGCGGCTGGCCGATGTCCGCAAATCCGGCCTG CTGAAATTCCTGCGTCCCGATGCAAAATCCCAGGTCTCGGTTGAGTATGACAACGGCAAGCCGGTACGGGTCAATACCGT GGTCATCTCCACCCAGCACACTCCTGATGTAACCCATGAAACCATTGTGGAAGGGGTCATGGATGAGGTGATCAAAAAGG TAATCCCTGCCCACCTGATGGATGAGCAGACCCGCTTCTTCATCAACCCCACCGGCCGTTTTGTGGTGGGTGGACCGATG GGCGACTGCGGTCTGACCGGTCGCAAGATCATTGTGGACACCTATGGCGGCATGGGCCGTCACGGCGGCGGAGCCTTCTC CGGCAAAGATCCCTCCAAGGTTGACCGTTCCGCTGCCTACATGGGCCGCTATGTGGCCAAGAACCTGGTGGCTGCCGGCC TGTGCGAGCGCTGTGAAGTCCAGGTGGCCTATGCCATCGGCGTGGCAGAGCCGGTCTCGATCATGGTTAATGCCTTCGGC ACCGGCGTGGTATCTGAGCATCGCCTGTCGGAGCTGGTACGGGAGGTCTTTGACATGCGTCCCCGCGCTATTACCGAGCA GCTTGACCTGCTGCGCCCGATCTATCAGAAGACCGCTGCCTATGGTCACTTTGGTCGTGAACTGCCTGAGTTTACCTGGG AAAAGACCGATAAGGCAGAGATCCTGAAACAGAAGGCCGGACTGTAA
Upstream 100 bases:
>100_bases GCAGAAACCATGCTGATGCTGAGGATCAGTAGACTGGGTTAACGAGGATTCGTTTTGTCTGGCAACAACCTATATTTTAC GTAAAAGGAGTTTCACGCAC
Downstream 100 bases:
>100_bases CCGGAGCCGTTAATCCTGACGTTTATGTAAGGGGCGGTCTCCAAAGAGATCGCCCCTTTTTCGTGATGATTGACAAACAT CTAATGTATACAGTAAGGTA
Product: S-adenosylmethionine synthetase
Products: NA
Alternate protein names: AdoMet synthase; MAT; Methionine adenosyltransferase [H]
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MAEKFIFTSESVSEGHPDKMADQISDSILDAILAQDPKARVACETMVTTGMAVIAGEITTTAVVNYAEIVRNTIKEIGYC GSETGFDYETCSVLVSLDRQSPDISQGVTEGEGMFKEQGAGDQGLMFGYACNETPELMPMPIQLSHQLVKRLADVRKSGL LKFLRPDAKSQVSVEYDNGKPVRVNTVVISTQHTPDVTHETIVEGVMDEVIKKVIPAHLMDEQTRFFINPTGRFVVGGPM GDCGLTGRKIIVDTYGGMGRHGGGAFSGKDPSKVDRSAAYMGRYVAKNLVAAGLCERCEVQVAYAIGVAEPVSIMVNAFG TGVVSEHRLSELVREVFDMRPRAITEQLDLLRPIYQKTAAYGHFGRELPEFTWEKTDKAEILKQKAGL
Sequences:
>Translated_388_residues MAEKFIFTSESVSEGHPDKMADQISDSILDAILAQDPKARVACETMVTTGMAVIAGEITTTAVVNYAEIVRNTIKEIGYC GSETGFDYETCSVLVSLDRQSPDISQGVTEGEGMFKEQGAGDQGLMFGYACNETPELMPMPIQLSHQLVKRLADVRKSGL LKFLRPDAKSQVSVEYDNGKPVRVNTVVISTQHTPDVTHETIVEGVMDEVIKKVIPAHLMDEQTRFFINPTGRFVVGGPM GDCGLTGRKIIVDTYGGMGRHGGGAFSGKDPSKVDRSAAYMGRYVAKNLVAAGLCERCEVQVAYAIGVAEPVSIMVNAFG TGVVSEHRLSELVREVFDMRPRAITEQLDLLRPIYQKTAAYGHFGRELPEFTWEKTDKAEILKQKAGL >Mature_387_residues AEKFIFTSESVSEGHPDKMADQISDSILDAILAQDPKARVACETMVTTGMAVIAGEITTTAVVNYAEIVRNTIKEIGYCG SETGFDYETCSVLVSLDRQSPDISQGVTEGEGMFKEQGAGDQGLMFGYACNETPELMPMPIQLSHQLVKRLADVRKSGLL KFLRPDAKSQVSVEYDNGKPVRVNTVVISTQHTPDVTHETIVEGVMDEVIKKVIPAHLMDEQTRFFINPTGRFVVGGPMG DCGLTGRKIIVDTYGGMGRHGGGAFSGKDPSKVDRSAAYMGRYVAKNLVAAGLCERCEVQVAYAIGVAEPVSIMVNAFGT GVVSEHRLSELVREVFDMRPRAITEQLDLLRPIYQKTAAYGHFGRELPEFTWEKTDKAEILKQKAGL
Specific function: Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the e
COG id: COG0192
COG function: function code H; S-adenosylmethionine synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AdoMet synthase family [H]
Homologues:
Organism=Homo sapiens, GI4557737, Length=374, Percent_Identity=59.6256684491979, Blast_Score=434, Evalue=1e-122, Organism=Homo sapiens, GI5174529, Length=374, Percent_Identity=58.2887700534759, Blast_Score=425, Evalue=1e-119, Organism=Escherichia coli, GI1789311, Length=385, Percent_Identity=66.2337662337662, Blast_Score=540, Evalue=1e-155, Organism=Caenorhabditis elegans, GI17538498, Length=383, Percent_Identity=59.0078328981723, Blast_Score=445, Evalue=1e-125, Organism=Caenorhabditis elegans, GI25145633, Length=385, Percent_Identity=58.961038961039, Blast_Score=444, Evalue=1e-125, Organism=Caenorhabditis elegans, GI17538494, Length=383, Percent_Identity=58.4856396866841, Blast_Score=443, Evalue=1e-125, Organism=Caenorhabditis elegans, GI17551082, Length=388, Percent_Identity=57.4742268041237, Blast_Score=439, Evalue=1e-124, Organism=Caenorhabditis elegans, GI32565905, Length=383, Percent_Identity=52.7415143603133, Blast_Score=380, Evalue=1e-105, Organism=Caenorhabditis elegans, GI32565911, Length=335, Percent_Identity=56.4179104477612, Blast_Score=368, Evalue=1e-102, Organism=Caenorhabditis elegans, GI25145635, Length=337, Percent_Identity=56.379821958457, Blast_Score=365, Evalue=1e-101, Organism=Caenorhabditis elegans, GI32565903, Length=318, Percent_Identity=54.7169811320755, Blast_Score=331, Evalue=3e-91, Organism=Caenorhabditis elegans, GI32565909, Length=83, Percent_Identity=67.4698795180723, Blast_Score=120, Evalue=1e-27, Organism=Caenorhabditis elegans, GI32565907, Length=40, Percent_Identity=82.5, Blast_Score=76, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6323209, Length=379, Percent_Identity=57.2559366754617, Blast_Score=438, Evalue=1e-124, Organism=Saccharomyces cerevisiae, GI6320710, Length=384, Percent_Identity=55.7291666666667, Blast_Score=436, Evalue=1e-123, Organism=Drosophila melanogaster, GI45552159, Length=381, Percent_Identity=56.4304461942257, Blast_Score=408, Evalue=1e-114, Organism=Drosophila melanogaster, GI24580529, Length=381, Percent_Identity=56.4304461942257, Blast_Score=408, Evalue=1e-114, Organism=Drosophila melanogaster, GI24580537, Length=381, Percent_Identity=56.4304461942257, Blast_Score=408, Evalue=1e-114, Organism=Drosophila melanogaster, GI24580533, Length=381, Percent_Identity=56.4304461942257, Blast_Score=408, Evalue=1e-114, Organism=Drosophila melanogaster, GI24580535, Length=381, Percent_Identity=56.4304461942257, Blast_Score=408, Evalue=1e-114, Organism=Drosophila melanogaster, GI24580531, Length=381, Percent_Identity=56.4304461942257, Blast_Score=408, Evalue=1e-114, Organism=Drosophila melanogaster, GI24580527, Length=381, Percent_Identity=55.3805774278215, Blast_Score=400, Evalue=1e-112, Organism=Drosophila melanogaster, GI24580525, Length=381, Percent_Identity=55.3805774278215, Blast_Score=400, Evalue=1e-112, Organism=Drosophila melanogaster, GI24580541, Length=368, Percent_Identity=54.3478260869565, Blast_Score=377, Evalue=1e-104, Organism=Drosophila melanogaster, GI24580539, Length=122, Percent_Identity=56.5573770491803, Blast_Score=141, Evalue=9e-34,
Paralogues:
None
Copy number: 7,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022631 - InterPro: IPR022630 - InterPro: IPR022629 - InterPro: IPR022628 - InterPro: IPR002133 - InterPro: IPR022636 [H]
Pfam domain/function: PF02773 S-AdoMet_synt_C; PF02772 S-AdoMet_synt_M; PF00438 S-AdoMet_synt_N [H]
EC number: =2.5.1.6 [H]
Molecular weight: Translated: 42340; Mature: 42209
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: PS00376 ADOMET_SYNTHETASE_1 ; PS00377 ADOMET_SYNTHETASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEKFIFTSESVSEGHPDKMADQISDSILDAILAQDPKARVACETMVTTGMAVIAGEITT CCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHCCCHHH TAVVNYAEIVRNTIKEIGYCGSETGFDYETCSVLVSLDRQSPDISQGVTEGEGMFKEQGA HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHCCC GDQGLMFGYACNETPELMPMPIQLSHQLVKRLADVRKSGLLKFLRPDAKSQVSVEYDNGK CCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC PVRVNTVVISTQHTPDVTHETIVEGVMDEVIKKVIPAHLMDEQTRFFINPTGRFVVGGPM EEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEECCCC GDCGLTGRKIIVDTYGGMGRHGGGAFSGKDPSKVDRSAAYMGRYVAKNLVAAGLCERCEV CCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCE QVAYAIGVAEPVSIMVNAFGTGVVSEHRLSELVREVFDMRPRAITEQLDLLRPIYQKTAA EEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH YGHFGRELPEFTWEKTDKAEILKQKAGL HHHHHHHCCCHHCCCCCHHHHHHHHCCC >Mature Secondary Structure AEKFIFTSESVSEGHPDKMADQISDSILDAILAQDPKARVACETMVTTGMAVIAGEITT CCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHCCCHHH TAVVNYAEIVRNTIKEIGYCGSETGFDYETCSVLVSLDRQSPDISQGVTEGEGMFKEQGA HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHCCC GDQGLMFGYACNETPELMPMPIQLSHQLVKRLADVRKSGLLKFLRPDAKSQVSVEYDNGK CCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC PVRVNTVVISTQHTPDVTHETIVEGVMDEVIKKVIPAHLMDEQTRFFINPTGRFVVGGPM EEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEECCCC GDCGLTGRKIIVDTYGGMGRHGGGAFSGKDPSKVDRSAAYMGRYVAKNLVAAGLCERCEV CCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCE QVAYAIGVAEPVSIMVNAFGTGVVSEHRLSELVREVFDMRPRAITEQLDLLRPIYQKTAA EEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH YGHFGRELPEFTWEKTDKAEILKQKAGL HHHHHHHCCCHHCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA