Click here to switch to the map view.

The map label for this gene is benC [H]

Identifier: 189354032

GI number: 189354032

Start: 2360551

End: 2361579

Strand: Reverse

Name: benC [H]

Synonym: BMULJ_05285

Alternate gene names: 189354032

Gene position: 2361579-2360551 (Counterclockwise)

Preceding gene: 189354033

Following gene: 189354031

Centisome position: 95.49

GC content: 65.69

Gene sequence:

>1029_bases
ATGTCCAGCTACAAGATTGCACTGAACTTCGAGGACGGCGTCACGCGCTTCATCGAATGCAAGGCCGGCGAGAAGGTGCT
CGATGCGGCATTTCGCGCGCGCATCAACCTGCCGATGGATTGTTCGGACGGCGTATGCGGCACCTGCAAGTGCCGCGCCG
AAAGCGGCCGCTACGATCTCGGCGACGACTACATCGACGACGCGCTGACCGAGGACGAGAAGGACGAAGGCCTCGTGCTG
ACGTGCCAGATGGTGCCGCAGAGCGACTGCGTGATCGCGGTGCCGACGTCATCGACGGCGTGCAAGACCGGCAACAGCCG
GTTCGCGGCGACCGTCGCGAAGATCGAGCCGCACAACGACGCGGCGATCGTGCTCGAACTCGACATCGACGCGGCCGCCG
ACGCACCGGTGTTCCTGCCGGGCCAGTACGTGAACATCGACGTGCCGGGCAGCGGCCAGCATCGGTCCTATTCGTTCTCG
TCGGCGCCCGGCGAGACGAAGGTCAGCTTCCTGATCAAGAAGATTCCGGGCGGCGTGATGAGCAGCTGGCTCGAAGCGGC
GCAGCCGGGCGACAAGCTCGACCTGCACGGGCCGCTCGGCAGCTTCTATCTGCGCGACGTGCAGCGGCCGTTGCTGTTCC
TCGCGGGCGGCACGGGGCTCGCGCCGTTCCTGTCGATGCTCGAAGTGCTCGCGCGCGCCGGGTCGCAGCAGAAGATCCAT
CTCGTCTACGGCGTCACGCGCGATCTCGATCTCGTGCAGGTCGACGCGATCGACGCCTATGTCGCGAAGCTGCCGAACTT
CAGCTACGCGACGGTGGTCGCCGACGAGGCGTCGAGCCACCCGCGCAAGGGCTGGGTCACGCAGCACATTCCGGCCGATG
CGCTGAACGACGGCGACGTCGACGTCTATCTGTGCGGCCCGCCGCCGATGGTCGATGCGGTGCGCAAGCATTTCGACGAT
ACGGGCGTGAAGCCGAACAGCTTCCACTACGAGAAGTTCACGCCGAACGTGACGGCAAAGGCGGCATGA

Upstream 100 bases:

>100_bases
CGTACAAGAAGATCGTGCTGAAGAACGACTACATCCGCCAGGTGCTCGACGTCTATCACGTCTGATGCCTGATATCGAAA
ACGGAATGGAGGAGCGTTCC

Downstream 100 bases:

>100_bases
CCATGCAACGATTCGCTGGCAAGACCCTCGTCGTCACCGGCGCCGCGCAGGGGATCGGCCGCGGCGTCGCGCTGCGCGCC
GCGGCCGAAGGCGGTCAAGT

Product: benzoate 1,2-dioxygenase electron transfer component

Products: NA

Alternate protein names: Ferredoxin; Ferredoxin--NAD(+) reductase [H]

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MSSYKIALNFEDGVTRFIECKAGEKVLDAAFRARINLPMDCSDGVCGTCKCRAESGRYDLGDDYIDDALTEDEKDEGLVL
TCQMVPQSDCVIAVPTSSTACKTGNSRFAATVAKIEPHNDAAIVLELDIDAAADAPVFLPGQYVNIDVPGSGQHRSYSFS
SAPGETKVSFLIKKIPGGVMSSWLEAAQPGDKLDLHGPLGSFYLRDVQRPLLFLAGGTGLAPFLSMLEVLARAGSQQKIH
LVYGVTRDLDLVQVDAIDAYVAKLPNFSYATVVADEASSHPRKGWVTQHIPADALNDGDVDVYLCGPPPMVDAVRKHFDD
TGVKPNSFHYEKFTPNVTAKAA

Sequences:

>Translated_342_residues
MSSYKIALNFEDGVTRFIECKAGEKVLDAAFRARINLPMDCSDGVCGTCKCRAESGRYDLGDDYIDDALTEDEKDEGLVL
TCQMVPQSDCVIAVPTSSTACKTGNSRFAATVAKIEPHNDAAIVLELDIDAAADAPVFLPGQYVNIDVPGSGQHRSYSFS
SAPGETKVSFLIKKIPGGVMSSWLEAAQPGDKLDLHGPLGSFYLRDVQRPLLFLAGGTGLAPFLSMLEVLARAGSQQKIH
LVYGVTRDLDLVQVDAIDAYVAKLPNFSYATVVADEASSHPRKGWVTQHIPADALNDGDVDVYLCGPPPMVDAVRKHFDD
TGVKPNSFHYEKFTPNVTAKAA
>Mature_341_residues
SSYKIALNFEDGVTRFIECKAGEKVLDAAFRARINLPMDCSDGVCGTCKCRAESGRYDLGDDYIDDALTEDEKDEGLVLT
CQMVPQSDCVIAVPTSSTACKTGNSRFAATVAKIEPHNDAAIVLELDIDAAADAPVFLPGQYVNIDVPGSGQHRSYSFSS
APGETKVSFLIKKIPGGVMSSWLEAAQPGDKLDLHGPLGSFYLRDVQRPLLFLAGGTGLAPFLSMLEVLARAGSQQKIHL
VYGVTRDLDLVQVDAIDAYVAKLPNFSYATVVADEASSHPRKGWVTQHIPADALNDGDVDVYLCGPPPMVDAVRKHFDDT
GVKPNSFHYEKFTPNVTAKAA

Specific function: Electron transfer component of toluate 1,2-dioxygenase system [H]

COG id: COG0543

COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

Organism=Escherichia coli, GI1788903, Length=254, Percent_Identity=27.5590551181102, Blast_Score=81, Evalue=9e-17,
Organism=Escherichia coli, GI1787098, Length=200, Percent_Identity=28.5, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1787658, Length=249, Percent_Identity=26.9076305220884, Blast_Score=66, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6322146, Length=210, Percent_Identity=30.4761904761905, Blast_Score=84, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6321673, Length=217, Percent_Identity=24.4239631336406, Blast_Score=67, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6323510, Length=200, Percent_Identity=26.5, Blast_Score=63, Evalue=6e-11,

Paralogues:

None

Copy number: 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR017927
- InterPro:   IPR001041
- InterPro:   IPR001709
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR001221
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]

EC number: =1.18.1.3 [H]

Molecular weight: Translated: 36808; Mature: 36677

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSYKIALNFEDGVTRFIECKAGEKVLDAAFRARINLPMDCSDGVCGTCKCRAESGRYDL
CCCEEEEEEECCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCC
GDDYIDDALTEDEKDEGLVLTCQMVPQSDCVIAVPTSSTACKTGNSRFAATVAKIEPHND
CCHHHHHHHCCCCCCCCEEEEEEECCCCCCEEEECCCCCEECCCCCEEEEEEEEECCCCC
AAIVLELDIDAAADAPVFLPGQYVNIDVPGSGQHRSYSFSSAPGETKVSFLIKKIPGGVM
CEEEEEEECCCCCCCCEEECCEEEEEECCCCCCCCCEECCCCCCCHHHHHHHHHCCCHHH
SSWLEAAQPGDKLDLHGPLGSFYLRDVQRPLLFLAGGTGLAPFLSMLEVLARAGSQQKIH
HHHHHHCCCCCCEEECCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEE
LVYGVTRDLDLVQVDAIDAYVAKLPNFSYATVVADEASSHPRKGWVTQHIPADALNDGDV
EEEECCCCCCEEEEHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEECCCCCCCCCCCCE
DVYLCGPPPMVDAVRKHFDDTGVKPNSFHYEKFTPNVTAKAA
EEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCEEECCC
>Mature Secondary Structure 
SSYKIALNFEDGVTRFIECKAGEKVLDAAFRARINLPMDCSDGVCGTCKCRAESGRYDL
CCEEEEEEECCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCC
GDDYIDDALTEDEKDEGLVLTCQMVPQSDCVIAVPTSSTACKTGNSRFAATVAKIEPHND
CCHHHHHHHCCCCCCCCEEEEEEECCCCCCEEEECCCCCEECCCCCEEEEEEEEECCCCC
AAIVLELDIDAAADAPVFLPGQYVNIDVPGSGQHRSYSFSSAPGETKVSFLIKKIPGGVM
CEEEEEEECCCCCCCCEEECCEEEEEECCCCCCCCCEECCCCCCCHHHHHHHHHCCCHHH
SSWLEAAQPGDKLDLHGPLGSFYLRDVQRPLLFLAGGTGLAPFLSMLEVLARAGSQQKIH
HHHHHHCCCCCCEEECCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEE
LVYGVTRDLDLVQVDAIDAYVAKLPNFSYATVVADEASSHPRKGWVTQHIPADALNDGDV
EEEECCCCCCEEEEHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEECCCCCCCCCCCCE
DVYLCGPPPMVDAVRKHFDDTGVKPNSFHYEKFTPNVTAKAA
EEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1938949 [H]