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The map label for this gene is uxuR [H]

Identifier: 189353769

GI number: 189353769

Start: 2050825

End: 2051529

Strand: Direct

Name: uxuR [H]

Synonym: BMULJ_05016

Alternate gene names: 189353769

Gene position: 2050825-2051529 (Clockwise)

Preceding gene: 189353768

Following gene: 189353770

Centisome position: 82.92

GC content: 67.09

Gene sequence:

>705_bases
ATGTTCGAGAAAATCCCTGCCCGTGCGATGAGCGACCACGTCGCGCAGCAGCTGCTGAAGCAGATCGAAGCCGGCAGCTT
CGTGGCGACCGGCAAGCTGCCGACCGAAGCGGTACTCGCGCAGGAATTCGGCGTAAGCCGCACCGTGATTCGTGAAGCGA
TCTCGCGGCTGAAGAACGAAGGCGTCGTCGAGCCGCGTCAGGGCAGCGGCGTGTACGTGAACCAGCACGGCGCGATCCGG
CCGCTGCGCATCGACTACGCGGAAGCGGTCGAGGCGAGCTCGCTGCCGCATCTGCTCGCGGTGCGCCGCGCGATCGAAGC
CGAAGTCGCGGCCGAAGCCGCGCTGCGTCACAGCGACGAAGACATGGCCGACATCGACGACGCGCTGCGCAAGATCGACG
AAGCGGTCGCCGAAGGTCGCGACGGCGTCGCCGAGGATGTCGCGTTCCACCGCACGATCGCGGCCGTCACCGGCAACCCG
TATTTCCTCAAGACGCTGCAGTTCCTGAACCAGTATCTCGAAGCGGGCGTGAAGGTCACGCGCCGCAACGAAGCCACGCG
CGAGGACTTCTCGCGGCAGGTGCGCGAAGAACATGCGGCAATCGCCGACGCGATCCGCTCGCGCGATCCGATGGCTGCGC
GCAACGCGGCGCGCACGCACATGTACAACGCGGCGCGCCGTCTCGCGGAAGCCGGCATCTGCTGA

Upstream 100 bases:

>100_bases
ATTTCGCCGACGTTCGCGCCTTTTGACCGAGGGTATTCCCGGATGCTTCATCGCGATCAAATTTGTATGATGACCACATC
ACCTTACAAACTATCGCGTC

Downstream 100 bases:

>100_bases
CGCCGCGGCGCATTTCCGAATCCGTTCCGAATCGATCAAGGTTGACCATGTCACGAAATGTTGGAGTCATCGGCCTCGGT
GCGATGGGCCTCGGCGTCGC

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MFEKIPARAMSDHVAQQLLKQIEAGSFVATGKLPTEAVLAQEFGVSRTVIREAISRLKNEGVVEPRQGSGVYVNQHGAIR
PLRIDYAEAVEASSLPHLLAVRRAIEAEVAAEAALRHSDEDMADIDDALRKIDEAVAEGRDGVAEDVAFHRTIAAVTGNP
YFLKTLQFLNQYLEAGVKVTRRNEATREDFSRQVREEHAAIADAIRSRDPMAARNAARTHMYNAARRLAEAGIC

Sequences:

>Translated_234_residues
MFEKIPARAMSDHVAQQLLKQIEAGSFVATGKLPTEAVLAQEFGVSRTVIREAISRLKNEGVVEPRQGSGVYVNQHGAIR
PLRIDYAEAVEASSLPHLLAVRRAIEAEVAAEAALRHSDEDMADIDDALRKIDEAVAEGRDGVAEDVAFHRTIAAVTGNP
YFLKTLQFLNQYLEAGVKVTRRNEATREDFSRQVREEHAAIADAIRSRDPMAARNAARTHMYNAARRLAEAGIC
>Mature_234_residues
MFEKIPARAMSDHVAQQLLKQIEAGSFVATGKLPTEAVLAQEFGVSRTVIREAISRLKNEGVVEPRQGSGVYVNQHGAIR
PLRIDYAEAVEASSLPHLLAVRRAIEAEVAAEAALRHSDEDMADIDDALRKIDEAVAEGRDGVAEDVAFHRTIAAVTGNP
YFLKTLQFLNQYLEAGVKVTRRNEATREDFSRQVREEHAAIADAIRSRDPMAARNAARTHMYNAARRLAEAGIC

Specific function: Repressor for the uxuRBA operon [H]

COG id: COG2186

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790032, Length=222, Percent_Identity=31.5315315315315, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI48994955, Length=228, Percent_Identity=32.0175438596491, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1790780, Length=202, Percent_Identity=28.2178217821782, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI1786303, Length=225, Percent_Identity=32.4444444444444, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1789353, Length=229, Percent_Identity=27.9475982532751, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1789621, Length=221, Percent_Identity=27.1493212669683, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI87082208, Length=224, Percent_Identity=29.4642857142857, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 25742; Mature: 25742

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEKIPARAMSDHVAQQLLKQIEAGSFVATGKLPTEAVLAQEFGVSRTVIREAISRLKNE
CCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHC
GVVEPRQGSGVYVNQHGAIRPLRIDYAEAVEASSLPHLLAVRRAIEAEVAAEAALRHSDE
CCCCCCCCCCEEEECCCCCCEEECCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC
DMADIDDALRKIDEAVAEGRDGVAEDVAFHRTIAAVTGNPYFLKTLQFLNQYLEAGVKVT
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEH
RRNEATREDFSRQVREEHAAIADAIRSRDPMAARNAARTHMYNAARRLAEAGIC
HCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFEKIPARAMSDHVAQQLLKQIEAGSFVATGKLPTEAVLAQEFGVSRTVIREAISRLKNE
CCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHC
GVVEPRQGSGVYVNQHGAIRPLRIDYAEAVEASSLPHLLAVRRAIEAEVAAEAALRHSDE
CCCCCCCCCCEEEECCCCCCEEECCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC
DMADIDDALRKIDEAVAEGRDGVAEDVAFHRTIAAVTGNPYFLKTLQFLNQYLEAGVKVT
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEH
RRNEATREDFSRQVREEHAAIADAIRSRDPMAARNAARTHMYNAARRLAEAGIC
HCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]