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The map label for this gene is glxA [H]

Identifier: 189353768

GI number: 189353768

Start: 2049403

End: 2050470

Strand: Direct

Name: glxA [H]

Synonym: BMULJ_05015

Alternate gene names: 189353768

Gene position: 2049403-2050470 (Clockwise)

Preceding gene: 189353761

Following gene: 189353769

Centisome position: 82.87

GC content: 69.29

Gene sequence:

>1068_bases
ATGACACCCGACGTACCCGCTTCCCCTCTCGCCGAACCGGCGCCGCAGCGCATCCGCTTCGGCATCGTGCTGCTGCCGAA
CTTCACGCTCACCGCGTTCTCCGGGTTCGTCGACATGCTGCGGCTGTCCGCCGACGACGGCGACTACAGCAAGCCCGTGC
GCTGCGCGTGGAGCGTGATCGGCGACACGCTCGCGCCGGTGCGCGCGAGCTGCGGGATCCAGATCACGCCGTGGGAAACG
TTCGATGCGGCCGAGCCGTTCGATTACGTGGTCGTCGTCGGCGGGCTGCTGCATTCGGGGCCGCAAGCCGGCCCCGAAAC
GCTCGAGTTCATCCGTCGCGCGGCCGCGCGCGGCGCGACGATCGTCGGGATCTGCACGGGTGTGTTTACGCTGATGCGTG
CCGGCGTGCTCGACGGCTACCGCACCTGCGTGAGCTGGTTCCATTACTGGGATTTCATCGAACGCTTTCCGAGCGCCGAT
CCCGATCTGCTGATCGCCGACCGGCTGTTCGTGATCGACCGGCGGCGCATCACCTGCTCGGGCGGTCGCGCGTCGATCGA
CGTCGCCGCCGCGATCCTGCTGCGCCACTTCGAGCACGCGACCGTGCAGAAGGCGCTGCGCATCCTGCTCGTCGGCGAGA
TGCAGAAGGGCAATGCGCCGCAGCCGCATCCGCCGGGCCTCGAGCCCGCGACGCATCCGAAGGTCAAGCGCGCGATTCTT
CTGATGGAACAGCATGTCGGGCGCGCGCTGCCGCTCGAGGAACTCGCGTGCAAGCTCGATCTGTCGACGCGGCAGCTCGA
GCGGCTGTTCAAGGCGGAAACCGGCAAGAGCCCGCAGGCGTTCGCGAAGCAGGTGCGGCTGCGCACGGCCGCCTGGCTGC
TGACGAGTTCGGACCGCACCGTCGCCGACATCGCGTCGAGCTGCGGATTCGCCGACGCGTCGCACCTCGGGCGCGAGTTC
CGCAAGCAGTTCGGCGTGCCGCCGGCCGCGTATCGCGAGCGCGGCGGCGACGAAGCGGCAGCCGCCGCGAGCGTGACGGA
CGACGCGCTTCACGACGAAGTCGAGTGA

Upstream 100 bases:

>100_bases
AACCACAAGTCCGGCCGCGTCCGCATCGCGCGGCCGCGCGTCGGTTGCCGTATCCTGAACAGCGTGAGACCGCCCGCCCG
GCGTAACGAGATTTGCCGCA

Downstream 100 bases:

>100_bases
GCGGGCAGGCCGACGGCGCGTGACGATCGGCCTGCGTCGGCGCGAAAACCGGACGTTCGTGCCGTGCGTGCGACGGCGCC
CCGGCTCGAGCGCCAGCAGA

Product: AraC subfamily transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 354

Protein sequence:

>355_residues
MTPDVPASPLAEPAPQRIRFGIVLLPNFTLTAFSGFVDMLRLSADDGDYSKPVRCAWSVIGDTLAPVRASCGIQITPWET
FDAAEPFDYVVVVGGLLHSGPQAGPETLEFIRRAAARGATIVGICTGVFTLMRAGVLDGYRTCVSWFHYWDFIERFPSAD
PDLLIADRLFVIDRRRITCSGGRASIDVAAAILLRHFEHATVQKALRILLVGEMQKGNAPQPHPPGLEPATHPKVKRAIL
LMEQHVGRALPLEELACKLDLSTRQLERLFKAETGKSPQAFAKQVRLRTAAWLLTSSDRTVADIASSCGFADASHLGREF
RKQFGVPPAAYRERGGDEAAAAASVTDDALHDEVE

Sequences:

>Translated_355_residues
MTPDVPASPLAEPAPQRIRFGIVLLPNFTLTAFSGFVDMLRLSADDGDYSKPVRCAWSVIGDTLAPVRASCGIQITPWET
FDAAEPFDYVVVVGGLLHSGPQAGPETLEFIRRAAARGATIVGICTGVFTLMRAGVLDGYRTCVSWFHYWDFIERFPSAD
PDLLIADRLFVIDRRRITCSGGRASIDVAAAILLRHFEHATVQKALRILLVGEMQKGNAPQPHPPGLEPATHPKVKRAIL
LMEQHVGRALPLEELACKLDLSTRQLERLFKAETGKSPQAFAKQVRLRTAAWLLTSSDRTVADIASSCGFADASHLGREF
RKQFGVPPAAYRERGGDEAAAAASVTDDALHDEVE
>Mature_354_residues
TPDVPASPLAEPAPQRIRFGIVLLPNFTLTAFSGFVDMLRLSADDGDYSKPVRCAWSVIGDTLAPVRASCGIQITPWETF
DAAEPFDYVVVVGGLLHSGPQAGPETLEFIRRAAARGATIVGICTGVFTLMRAGVLDGYRTCVSWFHYWDFIERFPSADP
DLLIADRLFVIDRRRITCSGGRASIDVAAAILLRHFEHATVQKALRILLVGEMQKGNAPQPHPPGLEPATHPKVKRAILL
MEQHVGRALPLEELACKLDLSTRQLERLFKAETGKSPQAFAKQVRLRTAAWLLTSSDRTVADIASSCGFADASHLGREFR
KQFGVPPAAYRERGGDEAAAAASVTDDALHDEVE

Specific function: Positive Activator Of Genes Required For L-Rhamnose Utilization, Probably Of The Rhamnose Transporter Gene (Rhat). [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790339, Length=92, Percent_Identity=35.8695652173913, Blast_Score=68, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 38699; Mature: 38567

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPDVPASPLAEPAPQRIRFGIVLLPNFTLTAFSGFVDMLRLSADDGDYSKPVRCAWSVI
CCCCCCCCCCCCCCCHHEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
GDTLAPVRASCGIQITPWETFDAAEPFDYVVVVGGLLHSGPQAGPETLEFIRRAAARGAT
HHHHHHHHHHCCCEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC
IVGICTGVFTLMRAGVLDGYRTCVSWFHYWDFIERFPSADPDLLIADRLFVIDRRRITCS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCEEEEECCEEEEC
GGRASIDVAAAILLRHFEHATVQKALRILLVGEMQKGNAPQPHPPGLEPATHPKVKRAIL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
LMEQHVGRALPLEELACKLDLSTRQLERLFKAETGKSPQAFAKQVRLRTAAWLLTSSDRT
HHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEECCCCH
VADIASSCGFADASHLGREFRKQFGVPPAAYRERGGDEAAAAASVTDDALHDEVE
HHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TPDVPASPLAEPAPQRIRFGIVLLPNFTLTAFSGFVDMLRLSADDGDYSKPVRCAWSVI
CCCCCCCCCCCCCCHHEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
GDTLAPVRASCGIQITPWETFDAAEPFDYVVVVGGLLHSGPQAGPETLEFIRRAAARGAT
HHHHHHHHHHCCCEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC
IVGICTGVFTLMRAGVLDGYRTCVSWFHYWDFIERFPSADPDLLIADRLFVIDRRRITCS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCEEEEECCEEEEC
GGRASIDVAAAILLRHFEHATVQKALRILLVGEMQKGNAPQPHPPGLEPATHPKVKRAIL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
LMEQHVGRALPLEELACKLDLSTRQLERLFKAETGKSPQAFAKQVRLRTAAWLLTSSDRT
HHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEECCCCH
VADIASSCGFADASHLGREFRKQFGVPPAAYRERGGDEAAAAASVTDDALHDEVE
HHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]