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The map label for this gene is yomI [H]

Identifier: 189353761

GI number: 189353761

Start: 2041244

End: 2041903

Strand: Direct

Name: yomI [H]

Synonym: BMULJ_05008

Alternate gene names: 189353761

Gene position: 2041244-2041903 (Clockwise)

Preceding gene: 189353760

Following gene: 189353768

Centisome position: 82.54

GC content: 67.42

Gene sequence:

>660_bases
ATGCGACGGTTACTCTGGCTGATCGTGCTTTCGTTCGGCGTCGCGCACCAGGCGTCGGCGCAATCGGCATCGGCGCCGGC
CGCGCCCGCTGCCGCGGACGTTGCGGCCGCATCGAACGCGCTGCCCGCGTCCGATCCGCTCGCCGCCGCCGATCAGCCGA
ACGAAGCCAATCGGCGGATCACGGCGTATCTGACGAAGAAGTTCGGCGTCGCGAAGGAAAAGGCGATCAAGCTCGCGGAT
ATCGTCAGCGCGACGGCGACGAAATATTCGCTGCCGCCGGCACTCGTCTACGCGATCATCTCGATCGAATCGCGCTTCCA
GGAAAAGGCGCGCGGCCAGCATGGCGCGACCGGGCTGATGCAGGTCGTGCCGGCCGCGCATCGCGGGCTGCTGCGCAACG
TGAAGGATCTGACCGAGCCGAACGCGAACGTCGAGGCCGGCTCGGCCATCCTGTCCGGGTATGTGAAGGCGGCCGGCGGC
AACGTGCAGGCCGCGCTGAAGAGTTACGGCGGATCGAATGCGTATGCGGCCAAGGTACTGCAGCGCGTCGATTCGTTCCG
CTTCGTGCTCGAGCCGGCCGACGAGGCGAAAGCCGCCAGCGATGCGAACGTGCGCATGGTGCCGGTCAGCGATTCGTCGC
CGGCGCCGCGCAAGCCGTAA

Upstream 100 bases:

>100_bases
CCGTCACACACCTACAGATCGCTTTCGTTCGAGCGCCGCTTCGAATGCGCGGCGGAATTGGCCGATATACTGTGCGCCTT
CCGTTCTCCCTCATTCGCCC

Downstream 100 bases:

>100_bases
GCGGGCGCCGCGCGGATCTCGGAGCAGGCAGGCAAGGATAAAGCGCTGTCGGCGCGACGCCACAGCATAGCTACGAAAAT
ATCGGCATTGCAGGCGCACC

Product: putative lytic murein transglycosylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MRRLLWLIVLSFGVAHQASAQSASAPAAPAAADVAAASNALPASDPLAAADQPNEANRRITAYLTKKFGVAKEKAIKLAD
IVSATATKYSLPPALVYAIISIESRFQEKARGQHGATGLMQVVPAAHRGLLRNVKDLTEPNANVEAGSAILSGYVKAAGG
NVQAALKSYGGSNAYAAKVLQRVDSFRFVLEPADEAKAASDANVRMVPVSDSSPAPRKP

Sequences:

>Translated_219_residues
MRRLLWLIVLSFGVAHQASAQSASAPAAPAAADVAAASNALPASDPLAAADQPNEANRRITAYLTKKFGVAKEKAIKLAD
IVSATATKYSLPPALVYAIISIESRFQEKARGQHGATGLMQVVPAAHRGLLRNVKDLTEPNANVEAGSAILSGYVKAAGG
NVQAALKSYGGSNAYAAKVLQRVDSFRFVLEPADEAKAASDANVRMVPVSDSSPAPRKP
>Mature_219_residues
MRRLLWLIVLSFGVAHQASAQSASAPAAPAAADVAAASNALPASDPLAAADQPNEANRRITAYLTKKFGVAKEKAIKLAD
IVSATATKYSLPPALVYAIISIESRFQEKARGQHGATGLMQVVPAAHRGLLRNVKDLTEPNANVEAGSAILSGYVKAAGG
NVQAALKSYGGSNAYAAKVLQRVDSFRFVLEPADEAKAASDANVRMVPVSDSSPAPRKP

Specific function: Unknown

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 10 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR008258
- InterPro:   IPR016047
- InterPro:   IPR010090
- InterPro:   IPR000189 [H]

Pfam domain/function: PF01551 Peptidase_M23; PF10145 PhageMin_Tail; PF01464 SLT [H]

EC number: NA

Molecular weight: Translated: 22758; Mature: 22758

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLLWLIVLSFGVAHQASAQSASAPAAPAAADVAAASNALPASDPLAAADQPNEANRRI
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHH
TAYLTKKFGVAKEKAIKLADIVSATATKYSLPPALVYAIISIESRFQEKARGQHGATGLM
HHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHH
QVVPAAHRGLLRNVKDLTEPNANVEAGSAILSGYVKAAGGNVQAALKSYGGSNAYAAKVL
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHH
QRVDSFRFVLEPADEAKAASDANVRMVPVSDSSPAPRKP
HHHHHHHEEECCCHHHHCCCCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure
MRRLLWLIVLSFGVAHQASAQSASAPAAPAAADVAAASNALPASDPLAAADQPNEANRRI
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHH
TAYLTKKFGVAKEKAIKLADIVSATATKYSLPPALVYAIISIESRFQEKARGQHGATGLM
HHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHH
QVVPAAHRGLLRNVKDLTEPNANVEAGSAILSGYVKAAGGNVQAALKSYGGSNAYAAKVL
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHH
QRVDSFRFVLEPADEAKAASDANVRMVPVSDSSPAPRKP
HHHHHHHEEECCCHHHHCCCCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]