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The map label for this gene is rcsB [H]

Identifier: 189353495

GI number: 189353495

Start: 1714647

End: 1715351

Strand: Reverse

Name: rcsB [H]

Synonym: BMULJ_04739

Alternate gene names: 189353495

Gene position: 1715351-1714647 (Counterclockwise)

Preceding gene: 189353497

Following gene: 189353493

Centisome position: 69.36

GC content: 69.22

Gene sequence:

>705_bases
ATGAGGAAATTCAGCGTTCGCACCGTTTTCGCATACGACTGGCCACTGGCGCTCGTCGGGATGGAGCATGTCGTGGCCGC
CGGCTGCGCGATCGAACTGGTCGCCGCCTATCCGACGGCGGCCGAACTCGTCGCGGCGTTCGACACCGTCGACTGTCATG
TGCTGCTCGTCGACTATTCGCTGCGCGGCGATGGGCGCATCGAAGGGCTCGCGCTGCTCGAACGGCTGACGCGCGTGCGG
CCCGAGGTCGGGGTCGTCGCGCTCGTGCGCAACGAGAGCCCGGTGATCCTGCGGTCGATCCTCGCGCACGGCGCGACGAG
CATCGTCAGCAAGGGCGACGACGTCGGGCACATCGTCACCGCGGTCCATTCCGCCTACAGCGGCGGGCGCTATCTGTCGC
CGCTCGTGCGCCGCGCGCTCGACGCGAGCGGCAGCGAGCCCGCGCCGGCGAAGCTGTCGTCGCGCGAGGTCGAGGTGATC
CGGCTCTATCTGAGCGGCATTCCGATCAAGGCGATCGCGCAGCGGCTGAACAAGGGCAAGCAGACGGTCAGCGCGCAGAA
GATCAGTGCGATGAAGAAGCTCGGCGCGCATAACGACGTCGAGCTGATCCGCTATGCGGCAGGGCTCGGGCTCGGCGGCG
CGACGCTCGACGCCACCGTGCCGCGTGCGCCGCGCGTGCGCGGCACGGCGCGCGTCGACGATTGA

Upstream 100 bases:

>100_bases
AGAATGTCTGTAGGCTAAATATCGCCTGACTCGACATTCACCGGCAATCCGGCCGGCTGCGCGGTCGATCCGTCCGGCCG
GCGAACCAGATGGAAAGGGC

Downstream 100 bases:

>100_bases
TGCCGGGCACGGGCGCGCACACGGCGGCTCGCACGCCGCGATGCGCGGCACCCGCCGGCACGCGATCGTCGGCTTGCCGT
GGCGATCGCGCGCCCGCGGC

Product: signal transduction response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MRKFSVRTVFAYDWPLALVGMEHVVAAGCAIELVAAYPTAAELVAAFDTVDCHVLLVDYSLRGDGRIEGLALLERLTRVR
PEVGVVALVRNESPVILRSILAHGATSIVSKGDDVGHIVTAVHSAYSGGRYLSPLVRRALDASGSEPAPAKLSSREVEVI
RLYLSGIPIKAIAQRLNKGKQTVSAQKISAMKKLGAHNDVELIRYAAGLGLGGATLDATVPRAPRVRGTARVDD

Sequences:

>Translated_234_residues
MRKFSVRTVFAYDWPLALVGMEHVVAAGCAIELVAAYPTAAELVAAFDTVDCHVLLVDYSLRGDGRIEGLALLERLTRVR
PEVGVVALVRNESPVILRSILAHGATSIVSKGDDVGHIVTAVHSAYSGGRYLSPLVRRALDASGSEPAPAKLSSREVEVI
RLYLSGIPIKAIAQRLNKGKQTVSAQKISAMKKLGAHNDVELIRYAAGLGLGGATLDATVPRAPRVRGTARVDD
>Mature_234_residues
MRKFSVRTVFAYDWPLALVGMEHVVAAGCAIELVAAYPTAAELVAAFDTVDCHVLLVDYSLRGDGRIEGLALLERLTRVR
PEVGVVALVRNESPVILRSILAHGATSIVSKGDDVGHIVTAVHSAYSGGRYLSPLVRRALDASGSEPAPAKLSSREVEVI
RLYLSGIPIKAIAQRLNKGKQTVSAQKISAMKKLGAHNDVELIRYAAGLGLGGATLDATVPRAPRVRGTARVDD

Specific function: Also stimulates ftsZ expression. This suggests that rcsB is a regulator implicated in the regulation of more than one cellular function [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788546, Length=214, Percent_Identity=29.4392523364486, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI1788222, Length=215, Percent_Identity=27.4418604651163, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1790102, Length=174, Percent_Identity=29.8850574712644, Blast_Score=70, Evalue=8e-14,
Organism=Escherichia coli, GI1786747, Length=157, Percent_Identity=33.1210191082803, Blast_Score=64, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 24883; Mature: 24883

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKFSVRTVFAYDWPLALVGMEHVVAAGCAIELVAAYPTAAELVAAFDTVDCHVLLVDYS
CCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEEEE
LRGDGRIEGLALLERLTRVRPEVGVVALVRNESPVILRSILAHGATSIVSKGDDVGHIVT
ECCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHCHHHHHHCCCCHHHHHH
AVHSAYSGGRYLSPLVRRALDASGSEPAPAKLSSREVEVIRLYLSGIPIKAIAQRLNKGK
HHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHH
QTVSAQKISAMKKLGAHNDVELIRYAAGLGLGGATLDATVPRAPRVRGTARVDD
HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRKFSVRTVFAYDWPLALVGMEHVVAAGCAIELVAAYPTAAELVAAFDTVDCHVLLVDYS
CCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEEEE
LRGDGRIEGLALLERLTRVRPEVGVVALVRNESPVILRSILAHGATSIVSKGDDVGHIVT
ECCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHCHHHHHHCCCCHHHHHH
AVHSAYSGGRYLSPLVRRALDASGSEPAPAKLSSREVEVIRLYLSGIPIKAIAQRLNKGK
HHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHH
QTVSAQKISAMKKLGAHNDVELIRYAAGLGLGGATLDATVPRAPRVRGTARVDD
HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]