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The map label for this gene is gylR [H]

Identifier: 189352968

GI number: 189352968

Start: 1126563

End: 1128209

Strand: Reverse

Name: gylR [H]

Synonym: BMULJ_04202

Alternate gene names: 189352968

Gene position: 1128209-1126563 (Counterclockwise)

Preceding gene: 189352972

Following gene: 189352965

Centisome position: 45.62

GC content: 74.13

Gene sequence:

>1647_bases
GTGCAGAACCACGAAGTCAGCGCCGACGACGCGCCGAAGGCGCAGCGCGGCATCCAGAGCGTCGAGGTCGGCGGTCGGCT
GCTCGACGCGCTCGCGCGCCGGCGCAAGCCGCTCGGCCTGTCGGAGCTCGCGGCCGCGGCCGATCTGTCGACCGCGCAGG
CGCATACGTATCTGGTCAGTCTGACGCGGCTCGCGCTCGTGAAGCGCGACGCAATCACCGGCAACTACGAGCCGGGCCCG
CTCTCGCTGCGGCTCGGGCTCATGTCGATCGAGCGTCAGCCCGCGTATCGCGCGACGCTGCCGCACGCGGCGCGGCTCGC
GGAAACGGTCGGGCTCAGCGTCGCGCTGTCGGTGCCGGGCGCGCTTGGCCCGACGATCGTGCGGATCGAGCACGGCGGCT
ATCCGCTGCATGTGAACCTGCATGTGGGGTCGGTGATGTCGCTCGACACGACGGCGACGGGCCGCGTGTTCCGCGCGTTC
GGCGATCCCGCGCAACTCGCGGCGATGGCCGCCAGCCAGGCCGGCGCCGGCGATGCGCTCGCCGGTTTCGAGCGCACGCC
GCAGCCGGCGCCGGACGCCGGCGCGCGCCAGGCCGAACTCGACGCGATTCGTGCGCGCGGCATCGAGCGCAGTGTCGATT
TGCCGAGCCCGGGCGTCAGCGCGATGTGCGTGCCCGTGTTCGATGCGGACGGGCGCCTGCAGCTCGCGCTGACCGTCATC
GGTTCATCGGAATCGATCGACGTCGGCTGGGACGGCCCGGTCGCGGCCGCGTTGCGCGACGCGGCGCGGCAGGCCACCGC
GTCGCTGGGCGCCGCACAGGACATCGCGCCGCCGGCCGCCGCGGCGAGCGTCGCGCGCGTGCCGCCCGCGCTCGCCGACG
ATGCGAAGGCGCAACGCGGGATCAACGCGCTCGACAGCACGGGCGAACTGCTGCTCGCGCTCGTGTCGGCAGGCCGCGCG
CTGCCGCTGCGCGATCTCGCGGCCGCCGCCGCGATGCCGGCCGCGAAGGCGTTCCCGCATCTGGTCAGCCTGCAGAAGAT
CGGCCTGCTGAGCCGCGACGAGGCCGGCTGCTTCGACGGCGGCCCGCTTGCGCAGGCGCTTGGCCTGATCGCGATGCAGC
GCGTATCGCCGACGCGCGACGCGGAAGCCGAAATCGTCGCGCTGGCGGCGGCGACCGACCTGAGCGTCGCGGCGGCGACG
CTCGGGCCGCTCGGCCCGACCGTGATCCGGCTCGAGGAATCGGCGCGGCCGCAGCATGTGAGCCTGCAGGTCGGCACCGT
GATGTCGCTGGTCCATACGGCGATCGGCCGCAGCTTCGCGGCCGGCATGTCGGACGACGTGCTCGATGGCCTGCTCGCGA
ACGAGCCGGTACGGCTGGCCGGCCGCGCGACGCCGCCCGACGCGGCCTTCCGCGAGCGGCTCGCGGCGATTCGCGCGGCC
GGCGTCGACTTCGCGTTCGATGCACCGGTGCCCGGCATCGCGACGGTCGCCGCGCCGGTATTCGATCACACGGGCAGCAT
CCGGCTCGTGATCGCGATCATCGGGTCGTCGCACGGCTTCCCGCGCGAGCCGGACAGCGCGCTCGCGCAGACGCTGCTGG
CCGCGACGCGGCGGCTGTCCTGGCGCTTCGGCTGGATCGGCGCGTAA

Upstream 100 bases:

>100_bases
ACAAAGTCGCTTGCTATTGTCTAATACGGGTAAACCTGTGGACCGACGCTGCAAATGGCGTCGGATACCATGCGGGGTTT
CGTCTACGGAAGATCAACGC

Downstream 100 bases:

>100_bases
GGCCGCGGCGCTTCTTCTATCTCTTTCGATCGACGTACACCGTCCCGTGCGGGCAGCGCGCCCGCCGCGGCGCAGCAGCG
TGCCCGCGCGGCGCGGCGCG

Product: IclR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 548; Mature: 548

Protein sequence:

>548_residues
MQNHEVSADDAPKAQRGIQSVEVGGRLLDALARRRKPLGLSELAAAADLSTAQAHTYLVSLTRLALVKRDAITGNYEPGP
LSLRLGLMSIERQPAYRATLPHAARLAETVGLSVALSVPGALGPTIVRIEHGGYPLHVNLHVGSVMSLDTTATGRVFRAF
GDPAQLAAMAASQAGAGDALAGFERTPQPAPDAGARQAELDAIRARGIERSVDLPSPGVSAMCVPVFDADGRLQLALTVI
GSSESIDVGWDGPVAAALRDAARQATASLGAAQDIAPPAAAASVARVPPALADDAKAQRGINALDSTGELLLALVSAGRA
LPLRDLAAAAAMPAAKAFPHLVSLQKIGLLSRDEAGCFDGGPLAQALGLIAMQRVSPTRDAEAEIVALAAATDLSVAAAT
LGPLGPTVIRLEESARPQHVSLQVGTVMSLVHTAIGRSFAAGMSDDVLDGLLANEPVRLAGRATPPDAAFRERLAAIRAA
GVDFAFDAPVPGIATVAAPVFDHTGSIRLVIAIIGSSHGFPREPDSALAQTLLAATRRLSWRFGWIGA

Sequences:

>Translated_548_residues
MQNHEVSADDAPKAQRGIQSVEVGGRLLDALARRRKPLGLSELAAAADLSTAQAHTYLVSLTRLALVKRDAITGNYEPGP
LSLRLGLMSIERQPAYRATLPHAARLAETVGLSVALSVPGALGPTIVRIEHGGYPLHVNLHVGSVMSLDTTATGRVFRAF
GDPAQLAAMAASQAGAGDALAGFERTPQPAPDAGARQAELDAIRARGIERSVDLPSPGVSAMCVPVFDADGRLQLALTVI
GSSESIDVGWDGPVAAALRDAARQATASLGAAQDIAPPAAAASVARVPPALADDAKAQRGINALDSTGELLLALVSAGRA
LPLRDLAAAAAMPAAKAFPHLVSLQKIGLLSRDEAGCFDGGPLAQALGLIAMQRVSPTRDAEAEIVALAAATDLSVAAAT
LGPLGPTVIRLEESARPQHVSLQVGTVMSLVHTAIGRSFAAGMSDDVLDGLLANEPVRLAGRATPPDAAFRERLAAIRAA
GVDFAFDAPVPGIATVAAPVFDHTGSIRLVIAIIGSSHGFPREPDSALAQTLLAATRRLSWRFGWIGA
>Mature_548_residues
MQNHEVSADDAPKAQRGIQSVEVGGRLLDALARRRKPLGLSELAAAADLSTAQAHTYLVSLTRLALVKRDAITGNYEPGP
LSLRLGLMSIERQPAYRATLPHAARLAETVGLSVALSVPGALGPTIVRIEHGGYPLHVNLHVGSVMSLDTTATGRVFRAF
GDPAQLAAMAASQAGAGDALAGFERTPQPAPDAGARQAELDAIRARGIERSVDLPSPGVSAMCVPVFDADGRLQLALTVI
GSSESIDVGWDGPVAAALRDAARQATASLGAAQDIAPPAAAASVARVPPALADDAKAQRGINALDSTGELLLALVSAGRA
LPLRDLAAAAAMPAAKAFPHLVSLQKIGLLSRDEAGCFDGGPLAQALGLIAMQRVSPTRDAEAEIVALAAATDLSVAAAT
LGPLGPTVIRLEESARPQHVSLQVGTVMSLVHTAIGRSFAAGMSDDVLDGLLANEPVRLAGRATPPDAAFRERLAAIRAA
GVDFAFDAPVPGIATVAAPVFDHTGSIRLVIAIIGSSHGFPREPDSALAQTLLAATRRLSWRFGWIGA

Specific function: May be an activator protein for the gylABX operon [H]

COG id: COG1414

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 iclR-ED (iclR effector binding) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014757
- InterPro:   IPR005471
- InterPro:   IPR011991 [H]

Pfam domain/function: PF09339 HTH_IclR; PF01614 IclR [H]

EC number: NA

Molecular weight: Translated: 56248; Mature: 56248

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: PS51077 HTH_ICLR ; PS51078 ICLR_ED

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNHEVSADDAPKAQRGIQSVEVGGRLLDALARRRKPLGLSELAAAADLSTAQAHTYLVS
CCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHH
LTRLALVKRDAITGNYEPGPLSLRLGLMSIERQPAYRATLPHAARLAETVGLSVALSVPG
HHHHHHHHHHCCCCCCCCCCEEEEEEEHHHCCCCCHHHCCCHHHHHHHHHCCEEEEECCC
ALGPTIVRIEHGGYPLHVNLHVGSVMSLDTTATGRVFRAFGDPAQLAAMAASQAGAGDAL
CCCCEEEEEECCCEEEEEEEEECCEEEECCCCCCHHHHHCCCHHHHHHHHHHCCCCCCHH
AGFERTPQPAPDAGARQAELDAIRARGIERSVDLPSPGVSAMCVPVFDADGRLQLALTVI
HCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEE
GSSESIDVGWDGPVAAALRDAARQATASLGAAQDIAPPAAAASVARVPPALADDAKAQRG
CCCCEEECCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHCCCCHHCHHHHHHC
INALDSTGELLLALVSAGRALPLRDLAAAAAMPAAKAFPHLVSLQKIGLLSRDEAGCFDG
CCHHCCHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
GPLAQALGLIAMQRVSPTRDAEAEIVALAAATDLSVAAATLGPLGPTVIRLEESARPQHV
CHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHCCCCCEEEEEECCCCCCEE
SLQVGTVMSLVHTAIGRSFAAGMSDDVLDGLLANEPVRLAGRATPPDAAFRERLAAIRAA
EEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHC
GVDFAFDAPVPGIATVAAPVFDHTGSIRLVIAIIGSSHGFPREPDSALAQTLLAATRRLS
CCCEEECCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCC
WRFGWIGA
EEECCCCC
>Mature Secondary Structure
MQNHEVSADDAPKAQRGIQSVEVGGRLLDALARRRKPLGLSELAAAADLSTAQAHTYLVS
CCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHH
LTRLALVKRDAITGNYEPGPLSLRLGLMSIERQPAYRATLPHAARLAETVGLSVALSVPG
HHHHHHHHHHCCCCCCCCCCEEEEEEEHHHCCCCCHHHCCCHHHHHHHHHCCEEEEECCC
ALGPTIVRIEHGGYPLHVNLHVGSVMSLDTTATGRVFRAFGDPAQLAAMAASQAGAGDAL
CCCCEEEEEECCCEEEEEEEEECCEEEECCCCCCHHHHHCCCHHHHHHHHHHCCCCCCHH
AGFERTPQPAPDAGARQAELDAIRARGIERSVDLPSPGVSAMCVPVFDADGRLQLALTVI
HCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEE
GSSESIDVGWDGPVAAALRDAARQATASLGAAQDIAPPAAAASVARVPPALADDAKAQRG
CCCCEEECCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHCCCCHHCHHHHHHC
INALDSTGELLLALVSAGRALPLRDLAAAAAMPAAKAFPHLVSLQKIGLLSRDEAGCFDG
CCHHCCHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
GPLAQALGLIAMQRVSPTRDAEAEIVALAAATDLSVAAATLGPLGPTVIRLEESARPQHV
CHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHCCCCCEEEEEECCCCCCEE
SLQVGTVMSLVHTAIGRSFAAGMSDDVLDGLLANEPVRLAGRATPPDAAFRERLAAIRAA
EEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHC
GVDFAFDAPVPGIATVAAPVFDHTGSIRLVIAIIGSSHGFPREPDSALAQTLLAATRRLS
CCCEEECCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCC
WRFGWIGA
EEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3225846; 12000953 [H]