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The map label for this gene is nahR [H]

Identifier: 189352229

GI number: 189352229

Start: 269313

End: 270347

Strand: Reverse

Name: nahR [H]

Synonym: BMULJ_03447

Alternate gene names: 189352229

Gene position: 270347-269313 (Counterclockwise)

Preceding gene: 189352230

Following gene: 189352227

Centisome position: 10.93

GC content: 71.01

Gene sequence:

>1035_bases
ATGACGCCTTCCGTTCCCGGCCGCCCGCCGCCGCTGCGCACCGACGCGCCGCCGACCGATGCCGACGCGTGCGACGGATT
GCGCGTGCAGGACCTCGATCTGAATCTGCTGAAGACGTTCCGCGCCGTCTACGCGGAGCGGCACGTCGGCCGCGCGGCGC
TGCAGCTCGGCGTCACGCAGCCGTCCGTGAGCCATGCGCTCGGCCGGCTGCGGCTGATGTTCCGCGACGCGCTGTTCGTG
CGCACCGGCACCGGCGTCGAACCGACGCCGCGCGCCCAGCGGCTCGCCGTCTCGGTCGATCAGGCGCTCGCGATCCTGCA
GCACGTGCTCGACGAAGGTTCGCGTTTCGCGCCCGACACGACGCAGCGCGTGTTCCGGCTGCACATGAGCGACTTCGCGG
CGAGCGCCTTCCTGCCGACGCTGCTCGCCGAATTCGAGCGTCGCGCGCCCGGTGCGGTGATCGAGACGCTGCACGTCGAC
GAATGCCAGCTGAACGTCGCGCTCGAATCGGGCCGCATCGATTTCGCGCTCGGTCACTTCGCCGATGCGTCGAGCCATTT
CCAGCGCACCGCGCTGTTGCACGAACGCTGCGTCCTGCTGATGCCGCGCCGCACCGCGCGGCGCGTCGCGCTGCCCGACG
ATTTCGTGCTCGACGGCGACGCGCCAGACACGCTGCGCTTCGTCGCCGTCACGTCGCATCCGCAATCGATGCAGTTGCTC
GACCGGCACGGGCTGATGCCGCGCGTGCGCGTGGCGCTGCCCGATTTCATGGTGGTGCCCGCGCTGCTGCAGCACGGCGA
CTACGCGCTGATCCTGCCGGAGACGATCGCGCTCACGTTCGCCGCGCAGCAGCCGTGCACGCTCCACGCGATCGCCGGCG
CCGGCGAATGGGCGGTCAATGCGTACTGGCACCGCCGCTTCGATGCCGATCCCGGCCATCGCTGGCTGCGTGCGCTGCTG
CTCGAACTGTTCAGCATCGGCACGCTCGCGCCGTTCGAGGCATGGCTCGCGCCGCAGCCGCCCGCGTGCGCGTAA

Upstream 100 bases:

>100_bases
ACGTGCTGCTCGCGCACGGCATTCACGGTTTCGGTCATTTCGCGAAGGCGTATGCACGGCGTTACGGCCATCCGCCTTCC
GTCACTGCGAGGCAACCGCG

Downstream 100 bases:

>100_bases
GCGCGCAGCCCCGCGCGCCGGTACGCGCAGCCGTGCGTTCAGAACGACGTGACGATGCCCGCGACGAGCGAGCTTGCGGT
CGCGCCCGCTGCTGCGACCG

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MTPSVPGRPPPLRTDAPPTDADACDGLRVQDLDLNLLKTFRAVYAERHVGRAALQLGVTQPSVSHALGRLRLMFRDALFV
RTGTGVEPTPRAQRLAVSVDQALAILQHVLDEGSRFAPDTTQRVFRLHMSDFAASAFLPTLLAEFERRAPGAVIETLHVD
ECQLNVALESGRIDFALGHFADASSHFQRTALLHERCVLLMPRRTARRVALPDDFVLDGDAPDTLRFVAVTSHPQSMQLL
DRHGLMPRVRVALPDFMVVPALLQHGDYALILPETIALTFAAQQPCTLHAIAGAGEWAVNAYWHRRFDADPGHRWLRALL
LELFSIGTLAPFEAWLAPQPPACA

Sequences:

>Translated_344_residues
MTPSVPGRPPPLRTDAPPTDADACDGLRVQDLDLNLLKTFRAVYAERHVGRAALQLGVTQPSVSHALGRLRLMFRDALFV
RTGTGVEPTPRAQRLAVSVDQALAILQHVLDEGSRFAPDTTQRVFRLHMSDFAASAFLPTLLAEFERRAPGAVIETLHVD
ECQLNVALESGRIDFALGHFADASSHFQRTALLHERCVLLMPRRTARRVALPDDFVLDGDAPDTLRFVAVTSHPQSMQLL
DRHGLMPRVRVALPDFMVVPALLQHGDYALILPETIALTFAAQQPCTLHAIAGAGEWAVNAYWHRRFDADPGHRWLRALL
LELFSIGTLAPFEAWLAPQPPACA
>Mature_343_residues
TPSVPGRPPPLRTDAPPTDADACDGLRVQDLDLNLLKTFRAVYAERHVGRAALQLGVTQPSVSHALGRLRLMFRDALFVR
TGTGVEPTPRAQRLAVSVDQALAILQHVLDEGSRFAPDTTQRVFRLHMSDFAASAFLPTLLAEFERRAPGAVIETLHVDE
CQLNVALESGRIDFALGHFADASSHFQRTALLHERCVLLMPRRTARRVALPDDFVLDGDAPDTLRFVAVTSHPQSMQLLD
RHGLMPRVRVALPDFMVVPALLQHGDYALILPETIALTFAAQQPCTLHAIAGAGEWAVNAYWHRRFDADPGHRWLRALLL
ELFSIGTLAPFEAWLAPQPPACA

Specific function: Regulates the expression of the naphthalene (nahA-F) and salicylate (nahG-M) metabolism genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081684, Length=321, Percent_Identity=29.2834890965732, Blast_Score=105, Evalue=5e-24,
Organism=Escherichia coli, GI87081766, Length=255, Percent_Identity=25.0980392156863, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: 825 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 37933; Mature: 37802

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPSVPGRPPPLRTDAPPTDADACDGLRVQDLDLNLLKTFRAVYAERHVGRAALQLGVTQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCHHHHHHCCCC
PSVSHALGRLRLMFRDALFVRTGTGVEPTPRAQRLAVSVDQALAILQHVLDEGSRFAPDT
CHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
TQRVFRLHMSDFAASAFLPTLLAEFERRAPGAVIETLHVDECQLNVALESGRIDFALGHF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEECCCEEEEEEEECCCEEEEECCH
ADASSHFQRTALLHERCVLLMPRRTARRVALPDDFVLDGDAPDTLRFVAVTSHPQSMQLL
HCHHHHHHHHHHHHHHHHEECCCHHHCEECCCCCEEECCCCCCCEEEEEEECCCHHHHHH
DRHGLMPRVRVALPDFMVVPALLQHGDYALILPETIALTFAAQQPCTLHAIAGAGEWAVN
HHCCCCCEEHHHCCHHHHHHHHHHCCCEEEECCCCEEEEEECCCCCEEEEECCCCCHHHH
AYWHRRFDADPGHRWLRALLLELFSIGTLAPFEAWLAPQPPACA
HHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCC
>Mature Secondary Structure 
TPSVPGRPPPLRTDAPPTDADACDGLRVQDLDLNLLKTFRAVYAERHVGRAALQLGVTQ
CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCHHHHHHCCCC
PSVSHALGRLRLMFRDALFVRTGTGVEPTPRAQRLAVSVDQALAILQHVLDEGSRFAPDT
CHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
TQRVFRLHMSDFAASAFLPTLLAEFERRAPGAVIETLHVDECQLNVALESGRIDFALGHF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEECCCEEEEEEEECCCEEEEECCH
ADASSHFQRTALLHERCVLLMPRRTARRVALPDDFVLDGDAPDTLRFVAVTSHPQSMQLL
HCHHHHHHHHHHHHHHHHEECCCHHHCEECCCCCEEECCCCCCCEEEEEEECCCHHHHHH
DRHGLMPRVRVALPDFMVVPALLQHGDYALILPETIALTFAAQQPCTLHAIAGAGEWAVN
HHCCCCCEEHHHCCHHHHHHHHHHCCCEEEECCCCEEEEEECCCCCEEEEECCCCCHHHH
AYWHRRFDADPGHRWLRALLLELFSIGTLAPFEAWLAPQPPACA
HHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2703465; 2848005 [H]