Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is traG [H]

Identifier: 189184737

GI number: 189184737

Start: 1859697

End: 1862324

Strand: Direct

Name: traG [H]

Synonym: OTT_1830

Alternate gene names: 189184737

Gene position: 1859697-1862324 (Clockwise)

Preceding gene: 189184736

Following gene: 189184738

Centisome position: 92.57

GC content: 35.08

Gene sequence:

>2628_bases
ATGGATTACGTAATACATACATTTGGTGGTGGAGATTTGTTGTGGCATGTGTTTAACGGCATAGGCAGAGTATTTGCTTC
AAATAGTGAATACTTTACTCCTGTAGGCCACTTAGCCTTGACTATTGGTGGCATATGGGCTGCTACTAGGGCTATTTTTA
GAGGAAATATCGGCATCTTTGCTATGGAATGGTTTTTTCCATCGATATTTATTTTTACGCTGTTATTTGCCCCCAAATCT
ACTGTTTGGCTGAAGGATGAAGTATCAATGAGTGCGCCAGTGAAGGTTGATAACATTCCTATAGGTATTGCAATGTTTGC
TTCTCTTTCCTCGCAAACGAGTTACTTTGTATCCAAAATGTTGGAAAATCATCTTTTACCGGCTTATGAAGGACTATCGA
GCAGAAAAACTGGTATTATGTTTGGAGCTAAGGCTGTAGCTAAGATTCGAGATGTACAAATACAGGATCCAATAACTTTA
ACTAATACGAAAGAATTTCTTAGACAATGCTTTATGAAACCTTACATCATAGGTAATATTCTAGGCAAGAAAGCTGCTGC
TCAACAAACTAACGACATTATAGGATTTATCGAGCAAAATATACCTAATAATTTTGGTATTTATTATAAAGATCATAGTA
ATTTAGCTATTAGTTTCAAGACCTGTAGACAAGCTACTCCATTAATTAAAGCAGCAATTCATAAAGAATTAAATGAAGGG
CTTCTAACAAAGTTCGCAGCAGCGATTGGAGTTCAATCTGATCAGTCAAACATGTTAAGTCAAAGACTAAAAGTTATGAC
TGGAGATACACTAAAATATCTACAAAGAGAGCAACAAGACATTCACGAATGGATGAAGCAAGCGATGTTACTTAATGCTA
ATCGTGAGTCATATGATGACTGGCGGGAGAAGTTTTCATTATCACGAATTTATCCCAATTTAGTTAGTATGCATGCAATC
AGAGGACTTTTTCAACAGTCATTTTCGTATCTAGTAGCTGGAGAAATGGCTGCTCACATGATGCCGATTTTACAATCTGT
ATTTTTTGCATTAGTAGTCTCAATGATCTTTATTGTATTTCCAATGGGCTTACTGCCTGGTGGATACAATATATTAAAGA
CCTGGATTCTATTAATAATATGGGTCAGCAGCTGGCCAGTATTTTTTACAATAATCCATTGCCTAGGAATGATCAGCTTA
TCCAGTAAATCTGGAGCTTTCGGTAGTGATTATGGGCTGAATATGCTATCGCAAGGAAGCTTTGCAGAGATGATTTTATA
TAGCTATGCGACATTTCAAATGCTTGCATCATCAATACCAATGCTTTCTTGGGCAGTGATAAAAGCTTGCGCTCATGCTA
CAGCTAACTTAGCAAGCCAGTTCTCTCCTATACCAGTTGCTAGCAGCTTAGGAAGTAATATAGTCGACAATAACTTGAGT
ATGGATAATTACAGCATAGGCAATAGAACTATTTCTCAACAAAACCTAGCTCCTTCATTAGATATGAGTGCTAGTATTAA
TGATGGTAGTATAAAAGTCACTACAACGGATGATGGTCGACAAATTATAAATAAAAACGTAGATTCATTATTAGATAACT
ACCGCTCTTCTGTACTGCTACAATCTGGATATCAAAACCAGTTTGTGCGTTCACAGAGCAGGCTTAATTCACTAACTAAA
AGAGAGGCCGATCTTATTTCAACAGGAAACTCTATGGCCATGGAAATAGGACAAAGACTAACTCACGATGAAATTCGTTC
TATAGGCCTAACTGAGAGTGAATCCCAAGCTCTGCAAATTGTTAGTTCCGATAGTGAATCCTTTAGTCAGCATACAGGTA
GTAGCCACAGTAAAAGTAGTAGTACTAGTACTAGTGCTGGAGGTGGGGTGTGGGGATTTAATACTACAGTTTCAGGAGGC
CGAAGACATAATAATGAACAAGGCAACTCAGTAAATCAGCAACAATCGCATAGTGAAGCATTATCAAAAATTCAGAGTGC
AGTTAGAGAAGAAAGATTTAGTAGTACAAATAGTGAGGTGCAGTCATTAAGTGAGAATCTGAATGCTAACCTTTCTGAGC
AGAAATCAATTGGGCAAGAAATAGCTCAAACTAAACAAGAAATGGAGCAACTTAGTCATAGTATGAACTATGTATCTCAA
AACTCTATCACTATTGATCGTAACATCAATGAACTTGTATTAAATGAAATTATTGCTCAAAATCCTGAAATAAGAAGCAA
GGAGCAAGCAGCTAGATGGATAATGTATCACTCGGCTGAAGCAGAAAAAATTGCTTTTGAGGTTGCTCAAATCAACAATG
AAGTACCTAAAAATTTGAATGATTTTAATGATGATAATTTTTTGAATAAACAAGATCTACAAGAAATTTTTAATAAAAAA
TCTGAAGAGTTAAAAGGTCAAAACGTCAATTATAGCAATGATAAGGCTTATAATAAGAATATAGAACAAACTTTTAGTAA
TAATAAAAAAATAAAGAATCTTGATCAAGTTTCTGATAGTATTAAGGATAAGACTAAAGAAATACAGGATGAATTTAATA
ATACTTCTAATTCAGCAGTTATTTTAACTGTCAAACAAGCAGTAAAAAATTTAAAGGATAATAAATGA

Upstream 100 bases:

>100_bases
TTGCAAATGAGAAATGGACTAGCCTACAAACCGATGCAAGTCGAATAGATAAAAGGGCTAGATTAATAGAACAACATTTA
ATGGCGAAGGAGAGAAGCTA

Downstream 100 bases:

>100_bases
TTAGTAATTAATATGAAAAACGTGTGTAAAAAATTAGCCATTATTTTATCATTAATATTATTAAATACAGCAGCTGTTGC
AGCAGAGCAAAGCATACAAC

Product: putative conjugative transfer protein TraG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 875; Mature: 875

Protein sequence:

>875_residues
MDYVIHTFGGGDLLWHVFNGIGRVFASNSEYFTPVGHLALTIGGIWAATRAIFRGNIGIFAMEWFFPSIFIFTLLFAPKS
TVWLKDEVSMSAPVKVDNIPIGIAMFASLSSQTSYFVSKMLENHLLPAYEGLSSRKTGIMFGAKAVAKIRDVQIQDPITL
TNTKEFLRQCFMKPYIIGNILGKKAAAQQTNDIIGFIEQNIPNNFGIYYKDHSNLAISFKTCRQATPLIKAAIHKELNEG
LLTKFAAAIGVQSDQSNMLSQRLKVMTGDTLKYLQREQQDIHEWMKQAMLLNANRESYDDWREKFSLSRIYPNLVSMHAI
RGLFQQSFSYLVAGEMAAHMMPILQSVFFALVVSMIFIVFPMGLLPGGYNILKTWILLIIWVSSWPVFFTIIHCLGMISL
SSKSGAFGSDYGLNMLSQGSFAEMILYSYATFQMLASSIPMLSWAVIKACAHATANLASQFSPIPVASSLGSNIVDNNLS
MDNYSIGNRTISQQNLAPSLDMSASINDGSIKVTTTDDGRQIINKNVDSLLDNYRSSVLLQSGYQNQFVRSQSRLNSLTK
READLISTGNSMAMEIGQRLTHDEIRSIGLTESESQALQIVSSDSESFSQHTGSSHSKSSSTSTSAGGGVWGFNTTVSGG
RRHNNEQGNSVNQQQSHSEALSKIQSAVREERFSSTNSEVQSLSENLNANLSEQKSIGQEIAQTKQEMEQLSHSMNYVSQ
NSITIDRNINELVLNEIIAQNPEIRSKEQAARWIMYHSAEAEKIAFEVAQINNEVPKNLNDFNDDNFLNKQDLQEIFNKK
SEELKGQNVNYSNDKAYNKNIEQTFSNNKKIKNLDQVSDSIKDKTKEIQDEFNNTSNSAVILTVKQAVKNLKDNK

Sequences:

>Translated_875_residues
MDYVIHTFGGGDLLWHVFNGIGRVFASNSEYFTPVGHLALTIGGIWAATRAIFRGNIGIFAMEWFFPSIFIFTLLFAPKS
TVWLKDEVSMSAPVKVDNIPIGIAMFASLSSQTSYFVSKMLENHLLPAYEGLSSRKTGIMFGAKAVAKIRDVQIQDPITL
TNTKEFLRQCFMKPYIIGNILGKKAAAQQTNDIIGFIEQNIPNNFGIYYKDHSNLAISFKTCRQATPLIKAAIHKELNEG
LLTKFAAAIGVQSDQSNMLSQRLKVMTGDTLKYLQREQQDIHEWMKQAMLLNANRESYDDWREKFSLSRIYPNLVSMHAI
RGLFQQSFSYLVAGEMAAHMMPILQSVFFALVVSMIFIVFPMGLLPGGYNILKTWILLIIWVSSWPVFFTIIHCLGMISL
SSKSGAFGSDYGLNMLSQGSFAEMILYSYATFQMLASSIPMLSWAVIKACAHATANLASQFSPIPVASSLGSNIVDNNLS
MDNYSIGNRTISQQNLAPSLDMSASINDGSIKVTTTDDGRQIINKNVDSLLDNYRSSVLLQSGYQNQFVRSQSRLNSLTK
READLISTGNSMAMEIGQRLTHDEIRSIGLTESESQALQIVSSDSESFSQHTGSSHSKSSSTSTSAGGGVWGFNTTVSGG
RRHNNEQGNSVNQQQSHSEALSKIQSAVREERFSSTNSEVQSLSENLNANLSEQKSIGQEIAQTKQEMEQLSHSMNYVSQ
NSITIDRNINELVLNEIIAQNPEIRSKEQAARWIMYHSAEAEKIAFEVAQINNEVPKNLNDFNDDNFLNKQDLQEIFNKK
SEELKGQNVNYSNDKAYNKNIEQTFSNNKKIKNLDQVSDSIKDKTKEIQDEFNNTSNSAVILTVKQAVKNLKDNK
>Mature_875_residues
MDYVIHTFGGGDLLWHVFNGIGRVFASNSEYFTPVGHLALTIGGIWAATRAIFRGNIGIFAMEWFFPSIFIFTLLFAPKS
TVWLKDEVSMSAPVKVDNIPIGIAMFASLSSQTSYFVSKMLENHLLPAYEGLSSRKTGIMFGAKAVAKIRDVQIQDPITL
TNTKEFLRQCFMKPYIIGNILGKKAAAQQTNDIIGFIEQNIPNNFGIYYKDHSNLAISFKTCRQATPLIKAAIHKELNEG
LLTKFAAAIGVQSDQSNMLSQRLKVMTGDTLKYLQREQQDIHEWMKQAMLLNANRESYDDWREKFSLSRIYPNLVSMHAI
RGLFQQSFSYLVAGEMAAHMMPILQSVFFALVVSMIFIVFPMGLLPGGYNILKTWILLIIWVSSWPVFFTIIHCLGMISL
SSKSGAFGSDYGLNMLSQGSFAEMILYSYATFQMLASSIPMLSWAVIKACAHATANLASQFSPIPVASSLGSNIVDNNLS
MDNYSIGNRTISQQNLAPSLDMSASINDGSIKVTTTDDGRQIINKNVDSLLDNYRSSVLLQSGYQNQFVRSQSRLNSLTK
READLISTGNSMAMEIGQRLTHDEIRSIGLTESESQALQIVSSDSESFSQHTGSSHSKSSSTSTSAGGGVWGFNTTVSGG
RRHNNEQGNSVNQQQSHSEALSKIQSAVREERFSSTNSEVQSLSENLNANLSEQKSIGQEIAQTKQEMEQLSHSMNYVSQ
NSITIDRNINELVLNEIIAQNPEIRSKEQAARWIMYHSAEAEKIAFEVAQINNEVPKNLNDFNDDNFLNKQDLQEIFNKK
SEELKGQNVNYSNDKAYNKNIEQTFSNNKKIKNLDQVSDSIKDKTKEIQDEFNNTSNSAVILTVKQAVKNLKDNK

Specific function: Plays a crucial role in donor-recipient cell interactions. Required for two stages of the conjugation process:pilus biosynthesis and mating aggregate stabilization. May interact with traN [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012931 [H]

Pfam domain/function: PF07916 TraG_N [H]

EC number: NA

Molecular weight: Translated: 97537; Mature: 97537

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: PS00018 EF_HAND_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYVIHTFGGGDLLWHVFNGIGRVFASNSEYFTPVGHLALTIGGIWAATRAIFRGNIGIF
CCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEE
AMEWFFPSIFIFTLLFAPKSTVWLKDEVSMSAPVKVDNIPIGIAMFASLSSQTSYFVSKM
HHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHH
LENHLLPAYEGLSSRKTGIMFGAKAVAKIRDVQIQDPITLTNTKEFLRQCFMKPYIIGNI
HHHCCCHHHHCCCCCCCCCEEHHHHHHHHHCCEECCCEEECCHHHHHHHHHHCHHHHHHH
LGKKAAAQQTNDIIGFIEQNIPNNFGIYYKDHSNLAISFKTCRQATPLIKAAIHKELNEG
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHH
LLTKFAAAIGVQSDQSNMLSQRLKVMTGDTLKYLQREQQDIHEWMKQAMLLNANRESYDD
HHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
WREKFSLSRIYPNLVSMHAIRGLFQQSFSYLVAGEMAAHMMPILQSVFFALVVSMIFIVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PMGLLPGGYNILKTWILLIIWVSSWPVFFTIIHCLGMISLSSKSGAFGSDYGLNMLSQGS
HHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCC
FAEMILYSYATFQMLASSIPMLSWAVIKACAHATANLASQFSPIPVASSLGSNIVDNNLS
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHCCCCC
MDNYSIGNRTISQQNLAPSLDMSASINDGSIKVTTTDDGRQIINKNVDSLLDNYRSSVLL
CCCCCCCCCCCCHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHCCHHHHHHHHHHHHHH
QSGYQNQFVRSQSRLNSLTKREADLISTGNSMAMEIGQRLTHDEIRSIGLTESESQALQI
HCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHCCCCCCHHHHHHH
VSSDSESFSQHTGSSHSKSSSTSTSAGGGVWGFNTTVSGGRRHNNEQGNSVNQQQSHSEA
HHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
LSKIQSAVREERFSSTNSEVQSLSENLNANLSEQKSIGQEIAQTKQEMEQLSHSMNYVSQ
HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NSITIDRNINELVLNEIIAQNPEIRSKEQAARWIMYHSAEAEKIAFEVAQINNEVPKNLN
CCEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCC
DFNDDNFLNKQDLQEIFNKKSEELKGQNVNYSNDKAYNKNIEQTFSNNKKIKNLDQVSDS
CCCCCCCCCHHHHHHHHCCHHHHHCCCCCCCCCCCHHCCCHHHHHCCCCCHHHHHHHHHH
IKDKTKEIQDEFNNTSNSAVILTVKQAVKNLKDNK
HHHHHHHHHHHHCCCCCCEEEEEHHHHHHHCCCCC
>Mature Secondary Structure
MDYVIHTFGGGDLLWHVFNGIGRVFASNSEYFTPVGHLALTIGGIWAATRAIFRGNIGIF
CCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEE
AMEWFFPSIFIFTLLFAPKSTVWLKDEVSMSAPVKVDNIPIGIAMFASLSSQTSYFVSKM
HHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHH
LENHLLPAYEGLSSRKTGIMFGAKAVAKIRDVQIQDPITLTNTKEFLRQCFMKPYIIGNI
HHHCCCHHHHCCCCCCCCCEEHHHHHHHHHCCEECCCEEECCHHHHHHHHHHCHHHHHHH
LGKKAAAQQTNDIIGFIEQNIPNNFGIYYKDHSNLAISFKTCRQATPLIKAAIHKELNEG
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHH
LLTKFAAAIGVQSDQSNMLSQRLKVMTGDTLKYLQREQQDIHEWMKQAMLLNANRESYDD
HHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
WREKFSLSRIYPNLVSMHAIRGLFQQSFSYLVAGEMAAHMMPILQSVFFALVVSMIFIVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PMGLLPGGYNILKTWILLIIWVSSWPVFFTIIHCLGMISLSSKSGAFGSDYGLNMLSQGS
HHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCC
FAEMILYSYATFQMLASSIPMLSWAVIKACAHATANLASQFSPIPVASSLGSNIVDNNLS
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHCCCCC
MDNYSIGNRTISQQNLAPSLDMSASINDGSIKVTTTDDGRQIINKNVDSLLDNYRSSVLL
CCCCCCCCCCCCHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHCCHHHHHHHHHHHHHH
QSGYQNQFVRSQSRLNSLTKREADLISTGNSMAMEIGQRLTHDEIRSIGLTESESQALQI
HCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHCCCCCCHHHHHHH
VSSDSESFSQHTGSSHSKSSSTSTSAGGGVWGFNTTVSGGRRHNNEQGNSVNQQQSHSEA
HHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
LSKIQSAVREERFSSTNSEVQSLSENLNANLSEQKSIGQEIAQTKQEMEQLSHSMNYVSQ
HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NSITIDRNINELVLNEIIAQNPEIRSKEQAARWIMYHSAEAEKIAFEVAQINNEVPKNLN
CCEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCC
DFNDDNFLNKQDLQEIFNKKSEELKGQNVNYSNDKAYNKNIEQTFSNNKKIKNLDQVSDS
CCCCCCCCCHHHHHHHHCCHHHHHCCCCCCCCCCCHHCCCHHHHHCCCCCHHHHHHHHHH
IKDKTKEIQDEFNNTSNSAVILTVKQAVKNLKDNK
HHHHHHHHHHHHCCCCCCEEEEEHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1348105; 7915817 [H]